RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 GRXCR2A6NFK2 248 aa10.99□□□□□ -0.65
COPS3-217ENST00000583160 NBR1Q14596 966 aa10.99□□□□□ -0.65
COPS3-217ENST00000583160 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
COPS3-217ENST00000583160 P3H3Q8IVL6 736 aa10.98□□□□□ -0.65
COPS3-217ENST00000583160 C6orf132Q5T0Z8 1188 aa10.97□□□□□ -0.65
COPS3-217ENST00000583160 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
COPS3-217ENST00000583160 HRO43593 1189 aa10.96□□□□□ -0.65
COPS3-217ENST00000583160 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
COPS3-217ENST00000583160 SLC4A5Q9BY07 1137 aa10.96□□□□□ -0.65
COPS3-217ENST00000583160 VPS9D1Q9Y2B5 631 aa10.96□□□□□ -0.65
COPS3-217ENST00000583160 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
COPS3-217ENST00000583160 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
COPS3-217ENST00000583160 COL9A1P20849 921 aa10.95□□□□□ -0.66
COPS3-217ENST00000583160 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
COPS3-217ENST00000583160 MAP3K7O43318 606 aa10.93□□□□□ -0.66
COPS3-217ENST00000583160 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
COPS3-217ENST00000583160 OSBPP22059 807 aa10.91□□□□□ -0.66
COPS3-217ENST00000583160 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
COPS3-217ENST00000583160 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
COPS3-217ENST00000583160 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
COPS3-217ENST00000583160 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
COPS3-217ENST00000583160 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
COPS3-217ENST00000583160 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
COPS3-217ENST00000583160 SEMA3EO15041 775 aa10.85□□□□□ -0.67
COPS3-217ENST00000583160 RABGEF1Q9UJ41 708 aa10.85□□□□□ -0.67
COPS3-217ENST00000583160 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
COPS3-217ENST00000583160 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
COPS3-217ENST00000583160 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
COPS3-217ENST00000583160 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
COPS3-217ENST00000583160 TRIM6-TRIM34B2RNG4 842 aa10.82□□□□□ -0.68
COPS3-217ENST00000583160 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
COPS3-217ENST00000583160 CERKQ8TCT0 537 aa10.81□□□□□ -0.68
COPS3-217ENST00000583160 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
COPS3-217ENST00000583160 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
COPS3-217ENST00000583160 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
COPS3-217ENST00000583160 PRSS12P56730 875 aa10.78□□□□□ -0.68
COPS3-217ENST00000583160 TSKSQ9UJT2 592 aa10.78□□□□□ -0.68
COPS3-217ENST00000583160 TESPA1A2RU30 521 aaPredicted RBP10.76□□□□□ -0.69
COPS3-217ENST00000583160 PACS2Q86VP3 889 aa10.76□□□□□ -0.69
COPS3-217ENST00000583160 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
COPS3-217ENST00000583160 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
COPS3-217ENST00000583160 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
COPS3-217ENST00000583160 LAPTM4BQ86VI4 370 aa10.75□□□□□ -0.69
COPS3-217ENST00000583160 WNT2BQ93097 391 aa10.75□□□□□ -0.69
COPS3-217ENST00000583160 FAM198AQ9UFP1 575 aa10.75□□□□□ -0.69
COPS3-217ENST00000583160 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
COPS3-217ENST00000583160 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
COPS3-217ENST00000583160 PTPN5P54829 565 aa10.72□□□□□ -0.69
COPS3-217ENST00000583160 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
COPS3-217ENST00000583160 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
COPS3-217ENST00000583160 ZFRQ96KR1 1074 aaKnown RBP10.71□□□□□ -0.69
COPS3-217ENST00000583160 FAM98CQ17RN3 349 aaKnown RBP10.7□□□□□ -0.7
COPS3-217ENST00000583160 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
COPS3-217ENST00000583160 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
COPS3-217ENST00000583160 SMAPO00193 183 aa10.69□□□□□ -0.7
COPS3-217ENST00000583160 PTGDRQ13258 359 aa10.69□□□□□ -0.7
COPS3-217ENST00000583160 PADI6Q6TGC4 694 aa10.69□□□□□ -0.7
COPS3-217ENST00000583160 TATDN2Q93075 761 aa10.69□□□□□ -0.7
COPS3-217ENST00000583160 PNMA3Q9UL41 463 aa10.69□□□□□ -0.7
COPS3-217ENST00000583160 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
COPS3-217ENST00000583160 TTC13Q8NBP0 860 aa10.68□□□□□ -0.7
COPS3-217ENST00000583160 NBPF26B4DH59 902 aa10.67□□□□□ -0.7
COPS3-217ENST00000583160 NUDT18Q6ZVK8 323 aa10.67□□□□□ -0.7
COPS3-217ENST00000583160 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
COPS3-217ENST00000583160 BCAMP50895 628 aa10.65□□□□□ -0.7
COPS3-217ENST00000583160 FCHSD2O94868 740 aa10.64□□□□□ -0.71
COPS3-217ENST00000583160 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.62□□□□□ -0.71
COPS3-217ENST00000583160 LRCH3Q96II8 777 aa10.61□□□□□ -0.71
COPS3-217ENST00000583160 SAMD7Q7Z3H4 446 aa10.6□□□□□ -0.71
COPS3-217ENST00000583160 HIC1Q14526 733 aa10.59□□□□□ -0.71
COPS3-217ENST00000583160 EYA1Q99502 592 aa10.58□□□□□ -0.72
COPS3-217ENST00000583160 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
COPS3-217ENST00000583160 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
COPS3-217ENST00000583160 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
COPS3-217ENST00000583160 PLA2G2EQ9NZK7 142 aa10.57□□□□□ -0.72
COPS3-217ENST00000583160 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
COPS3-217ENST00000583160 HPS5Q9UPZ3 1129 aa10.57□□□□□ -0.72
COPS3-217ENST00000583160 FAM161AQ3B820 660 aa10.56□□□□□ -0.72
COPS3-217ENST00000583160 GPIHBP1Q8IV16 184 aa10.56□□□□□ -0.72
COPS3-217ENST00000583160 ADGRG1Q9Y653 693 aa10.56□□□□□ -0.72
COPS3-217ENST00000583160 GNPATO15228 680 aa10.55□□□□□ -0.72
COPS3-217ENST00000583160 GPR37O15354 613 aa10.55□□□□□ -0.72
COPS3-217ENST00000583160 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
COPS3-217ENST00000583160 FECHP22830 423 aa10.54□□□□□ -0.72
COPS3-217ENST00000583160 PPP4CP60510 307 aa10.54□□□□□ -0.72
COPS3-217ENST00000583160 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
COPS3-217ENST00000583160 NYAP1Q6ZVC0 841 aa10.53□□□□□ -0.72
COPS3-217ENST00000583160 RNF40O75150 1001 aa10.51□□□□□ -0.73
COPS3-217ENST00000583160 DNAJB2P25686 324 aa10.5□□□□□ -0.73
COPS3-217ENST00000583160 RCCD1A6NED2 376 aa10.49□□□□□ -0.73
COPS3-217ENST00000583160 OATP04181 439 aa10.49□□□□□ -0.73
COPS3-217ENST00000583160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
COPS3-217ENST00000583160 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
COPS3-217ENST00000583160 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
COPS3-217ENST00000583160 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
COPS3-217ENST00000583160 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
COPS3-217ENST00000583160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.45□□□□□ -0.74
COPS3-217ENST00000583160 METTL3Q86U44 580 aaKnown RBP10.45□□□□□ -0.74
COPS3-217ENST00000583160 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
COPS3-217ENST00000583160 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms