RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 MYT1LQ9UL68 1186 aa32.28■■■□□ 2.76
CCDC47-204ENST00000582252 RPRD2Q5VT52 1461 aaKnown RBP32.28■■■□□ 2.76
CCDC47-204ENST00000582252 KDM5DQ9BY66 1539 aa32.28■■■□□ 2.76
CCDC47-204ENST00000582252 ABCA6Q8N139 1617 aa32.22■■■□□ 2.75
CCDC47-204ENST00000582252 EIF2AK4Q9P2K8 1649 aaKnown RBP32.2■■■□□ 2.74
CCDC47-204ENST00000582252 UNC13BO14795 1591 aa32.2■■■□□ 2.74
CCDC47-204ENST00000582252 CENPBP07199 599 aaPredicted RBP32.2■■■□□ 2.74
CCDC47-204ENST00000582252 FOXD1Q16676 465 aa32.19■■■□□ 2.74
CCDC47-204ENST00000582252 MAGI2Q86UL8 1455 aa32.19■■■□□ 2.74
CCDC47-204ENST00000582252 DIP2CQ9Y2E4 1556 aa32.17■■■□□ 2.74
CCDC47-204ENST00000582252 DHX29Q7Z478 1369 aaKnown RBP32.16■■■□□ 2.74
CCDC47-204ENST00000582252 NUP155O75694 1391 aa32.15■■■□□ 2.74
CCDC47-204ENST00000582252 A2MP01023 1474 aa32.15■■■□□ 2.74
CCDC47-204ENST00000582252 COL17A1Q9UMD9 1497 aaPredicted RBP32.14■■■□□ 2.74
CCDC47-204ENST00000582252 DEPDC5O75140 1603 aa32.11■■■□□ 2.73
CCDC47-204ENST00000582252 PKD2Q13563 968 aa32.1■■■□□ 2.73
CCDC47-204ENST00000582252 L3MBTL2Q969R5 705 aa32.09■■■□□ 2.73
CCDC47-204ENST00000582252 BCORL1Q5H9F3 1711 aa32.09■■■□□ 2.73
CCDC47-204ENST00000582252 YEATS2Q9ULM3 1422 aa32.07■■■□□ 2.73
CCDC47-204ENST00000582252 IQGAP3Q86VI3 1631 aa32.06■■■□□ 2.72
CCDC47-204ENST00000582252 ARHGEF40Q8TER5 1519 aa32.04■■■□□ 2.72
CCDC47-204ENST00000582252 RNF17Q9BXT8 1623 aaKnown RBP32.03■■■□□ 2.72
CCDC47-204ENST00000582252 FAM135AQ9P2D6 1515 aa32.03■■■□□ 2.72
CCDC47-204ENST00000582252 REREQ9P2R6 1566 aa32.02■■■□□ 2.72
CCDC47-204ENST00000582252 PRDM15P57071 1507 aaPredicted RBP32■■■□□ 2.71
CCDC47-204ENST00000582252 ATP10AO60312 1499 aa32■■■□□ 2.71
CCDC47-204ENST00000582252 KIF3BO15066 747 aa31.99■■■□□ 2.71
CCDC47-204ENST00000582252 MROH1Q8NDA8 1641 aa31.97■■■□□ 2.71
CCDC47-204ENST00000582252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.96■■■□□ 2.713e-7■■□□□ 14
CCDC47-204ENST00000582252 VWDEQ8N2E2 1590 aa31.94■■■□□ 2.7
CCDC47-204ENST00000582252 KANK1Q14678 1352 aa31.93■■■□□ 2.7
CCDC47-204ENST00000582252 EIF4G2P78344 907 aaKnown RBP eCLIP31.92■■■□□ 2.7
CCDC47-204ENST00000582252 DDX10Q13206 875 aaKnown RBP31.92■■■□□ 2.7
CCDC47-204ENST00000582252 HIRIP3Q9BW71 556 aaPredicted RBP31.9■■■□□ 2.7
CCDC47-204ENST00000582252 AGLP35573 1532 aa31.89■■■□□ 2.7
CCDC47-204ENST00000582252 TET3O43151 1660 aa31.88■■■□□ 2.69
CCDC47-204ENST00000582252 YTHDC1Q96MU7 727 aaKnown RBP31.86■■■□□ 2.69
CCDC47-204ENST00000582252 HSPA5P11021 654 aaKnown RBP31.86■■■□□ 2.69
CCDC47-204ENST00000582252 CEP152O94986 1710 aa31.83■■■□□ 2.69
CCDC47-204ENST00000582252 NBPF8Q3BBV2 869 aa31.82■■■□□ 2.68
CCDC47-204ENST00000582252 LMTK2Q8IWU2 1503 aa31.82■■■□□ 2.68
CCDC47-204ENST00000582252 ZC3H13Q5T200 1668 aaKnown RBP31.81■■■□□ 2.68
CCDC47-204ENST00000582252 SIGLEC1Q9BZZ2 1709 aa31.8■■■□□ 2.68
CCDC47-204ENST00000582252 E9PCH4 1651 aa31.8■■■□□ 2.68
CCDC47-204ENST00000582252 GGT6Q6P531 493 aa31.79■■■□□ 2.68
CCDC47-204ENST00000582252 UHRF1BP1Q6BDS2 1440 aa31.78■■■□□ 2.68
CCDC47-204ENST00000582252 CCDC144AA2RUR9 1427 aa31.76■■■□□ 2.68
CCDC47-204ENST00000582252 EFCAB6Q5THR3 1501 aa31.76■■■□□ 2.68
CCDC47-204ENST00000582252 ABCC3O15438 1527 aa31.75■■■□□ 2.67
CCDC47-204ENST00000582252 POLR1AO95602 1720 aaPredicted RBP31.75■■■□□ 2.67
CCDC47-204ENST00000582252 ANP32CO43423 234 aa31.72■■■□□ 2.67
CCDC47-204ENST00000582252 SPHKAPQ2M3C7 1700 aa31.71■■■□□ 2.67
CCDC47-204ENST00000582252 CAMSAP1Q5T5Y3 1602 aa31.7■■■□□ 2.67
CCDC47-204ENST00000582252 RALGAPBQ86X10 1494 aa31.7■■■□□ 2.66
CCDC47-204ENST00000582252 WASHC2CQ9Y4E1 1318 aa31.69■■■□□ 2.66
CCDC47-204ENST00000582252 SPATA31E1Q6ZUB1 1445 aa31.68■■■□□ 2.66
CCDC47-204ENST00000582252 PPP6R1Q9UPN7 881 aa31.67■■■□□ 2.66
CCDC47-204ENST00000582252 WASHC2AQ641Q2 1341 aa31.65■■■□□ 2.66
CCDC47-204ENST00000582252 SCAF1Q9H7N4 1312 aaKnown RBP31.65■■■□□ 2.66
CCDC47-204ENST00000582252 PLA2R1Q13018 1463 aa31.63■■■□□ 2.65
CCDC47-204ENST00000582252 CCER2I3L3R5 266 aa31.63■■■□□ 2.65
CCDC47-204ENST00000582252 TRPM2O94759 1503 aa31.63■■■□□ 2.65
CCDC47-204ENST00000582252 ZNF326Q5BKZ1 582 aaKnown RBP31.61■■■□□ 2.65
CCDC47-204ENST00000582252 PTPRTO14522 1441 aa31.61■■■□□ 2.65
CCDC47-204ENST00000582252 CFAP65Q6ZU64 1925 aaKnown RBP31.61■■■□□ 2.65
CCDC47-204ENST00000582252 CCDC7Q96M83 1385 aa31.6■■■□□ 2.65
CCDC47-204ENST00000582252 NPATQ14207 1427 aa31.59■■■□□ 2.65
CCDC47-204ENST00000582252 ARHGAP31Q2M1Z3 1444 aa31.59■■■□□ 2.65
CCDC47-204ENST00000582252 ARID4BQ4LE39 1312 aaPredicted RBP31.59■■■□□ 2.65
CCDC47-204ENST00000582252 CLTCQ00610 1675 aaKnown RBP31.59■■■□□ 2.65
CCDC47-204ENST00000582252 USP47Q96K76 1375 aa31.58■■■□□ 2.65
CCDC47-204ENST00000582252 CNTLNQ9NXG0 1405 aa31.57■■■□□ 2.64
CCDC47-204ENST00000582252 DCAF11Q8TEB1 546 aa31.56■■■□□ 2.64
CCDC47-204ENST00000582252 MLECQ14165 292 aa31.53■■■□□ 2.64
CCDC47-204ENST00000582252 KDM2AQ9Y2K7 1162 aa31.51■■■□□ 2.63
CCDC47-204ENST00000582252 TRPM1Q7Z4N2 1603 aa31.51■■■□□ 2.63
CCDC47-204ENST00000582252 CLTCL1P53675 1640 aa31.5■■■□□ 2.63
CCDC47-204ENST00000582252 PRAG1Q86YV5 1406 aa31.49■■■□□ 2.63
CCDC47-204ENST00000582252 CARD11Q9BXL7 1154 aa31.48■■■□□ 2.63
CCDC47-204ENST00000582252 PREX1Q8TCU6 1659 aa31.48■■■□□ 2.63
CCDC47-204ENST00000582252 ESF1Q9H501 851 aaKnown RBP31.46■■■□□ 2.63
CCDC47-204ENST00000582252 MROH2AA6NES4 1674 aa31.46■■■□□ 2.63
CCDC47-204ENST00000582252 NOS1P29475 1434 aa31.46■■■□□ 2.63
CCDC47-204ENST00000582252 LAMC1P11047 1609 aa31.46■■■□□ 2.63
CCDC47-204ENST00000582252 KIF1BO60333 1816 aa31.45■■■□□ 2.63
CCDC47-204ENST00000582252 KIF7Q2M1P5 1343 aa31.44■■■□□ 2.62
CCDC47-204ENST00000582252 FER1L4A9Z1Z3 1794 aa31.44■■■□□ 2.62
CCDC47-204ENST00000582252 C11orf95C9JLR9 678 aaPredicted RBP31.44■■■□□ 2.62
CCDC47-204ENST00000582252 GTF3C3Q9Y5Q9 886 aa31.44■■■□□ 2.62
CCDC47-204ENST00000582252 ROCK2O75116 1388 aaKnown RBP31.43■■■□□ 2.62
CCDC47-204ENST00000582252 NEURL4Q96JN8 1562 aa31.41■■■□□ 2.62
CCDC47-204ENST00000582252 RGL3Q3MIN7 710 aa31.41■■■□□ 2.62
CCDC47-204ENST00000582252 SYNMO15061 1565 aa31.4■■■□□ 2.62
CCDC47-204ENST00000582252 UGGT1Q9NYU2 1555 aa31.39■■■□□ 2.62
CCDC47-204ENST00000582252 PIK3C2BO00750 1634 aa31.39■■■□□ 2.61
CCDC47-204ENST00000582252 ERVK-7P63135 1459 aa31.38■■■□□ 2.61
CCDC47-204ENST00000582252 STAC3Q96MF2 364 aa31.37■■■□□ 2.61
CCDC47-204ENST00000582252 GPRASP1Q5JY77 1395 aa31.36■■■□□ 2.61
CCDC47-204ENST00000582252 SPATA31D1Q6ZQQ2 1576 aa31.35■■■□□ 2.61
CCDC47-204ENST00000582252 ZMYM3Q14202 1370 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms