RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
TVP23B-209ENST00000581733 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
TVP23B-209ENST00000581733 COL9A1P20849 921 aa11.89□□□□□ -0.51
TVP23B-209ENST00000581733 NACADO15069 1562 aa11.88□□□□□ -0.51
TVP23B-209ENST00000581733 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
TVP23B-209ENST00000581733 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
TVP23B-209ENST00000581733 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
TVP23B-209ENST00000581733 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
TVP23B-209ENST00000581733 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
TVP23B-209ENST00000581733 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
TVP23B-209ENST00000581733 ZFRQ96KR1 1074 aaKnown RBP11.83□□□□□ -0.52
TVP23B-209ENST00000581733 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
TVP23B-209ENST00000581733 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
TVP23B-209ENST00000581733 KCNC4Q03721 635 aa11.82□□□□□ -0.52
TVP23B-209ENST00000581733 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
TVP23B-209ENST00000581733 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
TVP23B-209ENST00000581733 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
TVP23B-209ENST00000581733 RB1CC1Q8TDY2 1594 aa11.8□□□□□ -0.52
TVP23B-209ENST00000581733 NYAP1Q6ZVC0 841 aa11.8□□□□□ -0.52
TVP23B-209ENST00000581733 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
TVP23B-209ENST00000581733 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
TVP23B-209ENST00000581733 PHF14O94880 888 aa11.76□□□□□ -0.53
TVP23B-209ENST00000581733 MFSD10Q14728 455 aa11.75□□□□□ -0.53
TVP23B-209ENST00000581733 SHROOM4Q9ULL8 1493 aa11.74□□□□□ -0.53
TVP23B-209ENST00000581733 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
TVP23B-209ENST00000581733 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
TVP23B-209ENST00000581733 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-209ENST00000581733 LCE2BO14633 110 aa11.71□□□□□ -0.53
TVP23B-209ENST00000581733 GFRA3O60609 400 aa11.71□□□□□ -0.53
TVP23B-209ENST00000581733 LAPTM4AQ15012 233 aa11.71□□□□□ -0.53
TVP23B-209ENST00000581733 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
TVP23B-209ENST00000581733 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
TVP23B-209ENST00000581733 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.53
TVP23B-209ENST00000581733 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
TVP23B-209ENST00000581733 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
TVP23B-209ENST00000581733 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
TVP23B-209ENST00000581733 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
TVP23B-209ENST00000581733 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
TVP23B-209ENST00000581733 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
TVP23B-209ENST00000581733 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
TVP23B-209ENST00000581733 EPAS1Q99814 870 aa11.66□□□□□ -0.54
TVP23B-209ENST00000581733 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
TVP23B-209ENST00000581733 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
TVP23B-209ENST00000581733 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
TVP23B-209ENST00000581733 DPYSL4O14531 572 aa11.61□□□□□ -0.55
TVP23B-209ENST00000581733 PPP4CP60510 307 aa11.6□□□□□ -0.55
TVP23B-209ENST00000581733 DDX12PQ92771 950 aa11.6□□□□□ -0.55
TVP23B-209ENST00000581733 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
TVP23B-209ENST00000581733 PACS2Q86VP3 889 aa11.57□□□□□ -0.56
TVP23B-209ENST00000581733 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
TVP23B-209ENST00000581733 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
TVP23B-209ENST00000581733 SMAPO00193 183 aa11.54□□□□□ -0.56
TVP23B-209ENST00000581733 TSR1Q2NL82 804 aaKnown RBP11.54□□□□□ -0.56
TVP23B-209ENST00000581733 MAP3K7O43318 606 aa11.53□□□□□ -0.56
TVP23B-209ENST00000581733 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
TVP23B-209ENST00000581733 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
TVP23B-209ENST00000581733 SAMD7Q7Z3H4 446 aa11.53□□□□□ -0.56
TVP23B-209ENST00000581733 MTRQ99707 1265 aa11.53□□□□□ -0.56
TVP23B-209ENST00000581733 NBR1Q14596 966 aa11.52□□□□□ -0.57
TVP23B-209ENST00000581733 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
TVP23B-209ENST00000581733 IL21Q9HBE4 155 aa11.5□□□□□ -0.57
TVP23B-209ENST00000581733 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
TVP23B-209ENST00000581733 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
TVP23B-209ENST00000581733 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
TVP23B-209ENST00000581733 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
TVP23B-209ENST00000581733 RNF40O75150 1001 aa11.46□□□□□ -0.57
TVP23B-209ENST00000581733 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
TVP23B-209ENST00000581733 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
TVP23B-209ENST00000581733 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
TVP23B-209ENST00000581733 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
TVP23B-209ENST00000581733 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
TVP23B-209ENST00000581733 PRSS12P56730 875 aa11.43□□□□□ -0.58
TVP23B-209ENST00000581733 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
TVP23B-209ENST00000581733 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
TVP23B-209ENST00000581733 PNMA3Q9UL41 463 aa11.42□□□□□ -0.58
TVP23B-209ENST00000581733 TATDN2Q93075 761 aa11.41□□□□□ -0.58
TVP23B-209ENST00000581733 NBPF26B4DH59 902 aa11.4□□□□□ -0.58
TVP23B-209ENST00000581733 APLP1P51693 650 aa11.4□□□□□ -0.58
TVP23B-209ENST00000581733 ZNF775Q96BV0 537 aaPredicted RBP11.39□□□□□ -0.59
TVP23B-209ENST00000581733 PDIA6Q15084 440 aa11.38□□□□□ -0.59
TVP23B-209ENST00000581733 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
TVP23B-209ENST00000581733 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
TVP23B-209ENST00000581733 COPS2P61201 443 aa11.36□□□□□ -0.59
TVP23B-209ENST00000581733 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
TVP23B-209ENST00000581733 BICRAQ9NZM4 1560 aa11.36□□□□□ -0.59
TVP23B-209ENST00000581733 GGCXP38435 758 aa11.35□□□□□ -0.59
TVP23B-209ENST00000581733 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
TVP23B-209ENST00000581733 CERKQ8TCT0 537 aa11.34□□□□□ -0.59
TVP23B-209ENST00000581733 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
TVP23B-209ENST00000581733 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
TVP23B-209ENST00000581733 CDHR5Q9HBB8 845 aa11.31□□□□□ -0.6
TVP23B-209ENST00000581733 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
TVP23B-209ENST00000581733 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
TVP23B-209ENST00000581733 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
TVP23B-209ENST00000581733 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
TVP23B-209ENST00000581733 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
TVP23B-209ENST00000581733 SMARCA4P51532 1647 aa11.25□□□□□ -0.61
TVP23B-209ENST00000581733 ZPR1O75312 459 aa11.25□□□□□ -0.61
TVP23B-209ENST00000581733 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
TVP23B-209ENST00000581733 SLC19A1P41440 591 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms