RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
SUPT4H1-206ENST00000581204 KDM5CP41229 1560 aa13.35□□□□□ -0.27
SUPT4H1-206ENST00000581204 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
SUPT4H1-206ENST00000581204 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
SUPT4H1-206ENST00000581204 ALKQ9UM73 1620 aa13.34□□□□□ -0.27
SUPT4H1-206ENST00000581204 RGL2O15211 777 aa13.33□□□□□ -0.28
SUPT4H1-206ENST00000581204 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
SUPT4H1-206ENST00000581204 PLCH2O75038 1416 aa13.32□□□□□ -0.28
SUPT4H1-206ENST00000581204 CEP162Q5TB80 1403 aa13.32□□□□□ -0.28
SUPT4H1-206ENST00000581204 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
SUPT4H1-206ENST00000581204 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
SUPT4H1-206ENST00000581204 AGLP35573 1532 aa13.32□□□□□ -0.28
SUPT4H1-206ENST00000581204 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
SUPT4H1-206ENST00000581204 PLA2R1Q13018 1463 aa13.31□□□□□ -0.28
SUPT4H1-206ENST00000581204 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
SUPT4H1-206ENST00000581204 RANGAP1P46060 587 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-206ENST00000581204 RGS17Q9UGC6 210 aaPredicted RBP13.29□□□□□ -0.28
SUPT4H1-206ENST00000581204 NPATQ14207 1427 aa13.29□□□□□ -0.28
SUPT4H1-206ENST00000581204 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
SUPT4H1-206ENST00000581204 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
SUPT4H1-206ENST00000581204 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
SUPT4H1-206ENST00000581204 MYO3AQ8NEV4 1616 aa13.27□□□□□ -0.29
SUPT4H1-206ENST00000581204 MROH2AA6NES4 1674 aa13.26□□□□□ -0.29
SUPT4H1-206ENST00000581204 CLIP1P30622 1438 aa13.26□□□□□ -0.29
SUPT4H1-206ENST00000581204 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
SUPT4H1-206ENST00000581204 NUBP1P53384 320 aa13.25□□□□□ -0.29
SUPT4H1-206ENST00000581204 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
SUPT4H1-206ENST00000581204 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
SUPT4H1-206ENST00000581204 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
SUPT4H1-206ENST00000581204 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
SUPT4H1-206ENST00000581204 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
SUPT4H1-206ENST00000581204 CPS1P31327 1500 aa13.23□□□□□ -0.29
SUPT4H1-206ENST00000581204 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
SUPT4H1-206ENST00000581204 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
SUPT4H1-206ENST00000581204 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
SUPT4H1-206ENST00000581204 AFAP1Q8N556 730 aa13.22□□□□□ -0.29
SUPT4H1-206ENST00000581204 TOM1O60784 492 aa13.21□□□□□ -0.29
SUPT4H1-206ENST00000581204 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
SUPT4H1-206ENST00000581204 SUPT6HQ7KZ85 1726 aaKnown RBP13.2□□□□□ -0.3
SUPT4H1-206ENST00000581204 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
SUPT4H1-206ENST00000581204 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
SUPT4H1-206ENST00000581204 KIF14Q15058 1648 aa13.18□□□□□ -0.3
SUPT4H1-206ENST00000581204 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
SUPT4H1-206ENST00000581204 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
SUPT4H1-206ENST00000581204 ZMYM3Q14202 1370 aa13.18□□□□□ -0.3
SUPT4H1-206ENST00000581204 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
SUPT4H1-206ENST00000581204 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
SUPT4H1-206ENST00000581204 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
SUPT4H1-206ENST00000581204 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
SUPT4H1-206ENST00000581204 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
SUPT4H1-206ENST00000581204 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
SUPT4H1-206ENST00000581204 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
SUPT4H1-206ENST00000581204 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
SUPT4H1-206ENST00000581204 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-206ENST00000581204 ABCC1P33527 1531 aa13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 ESF1Q9H501 851 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-206ENST00000581204 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
SUPT4H1-206ENST00000581204 POTEAQ6S8J7 498 aa13.13□□□□□ -0.31
SUPT4H1-206ENST00000581204 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
SUPT4H1-206ENST00000581204 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
SUPT4H1-206ENST00000581204 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
SUPT4H1-206ENST00000581204 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-206ENST00000581204 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-206ENST00000581204 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
SUPT4H1-206ENST00000581204 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-206ENST00000581204 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
SUPT4H1-206ENST00000581204 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
SUPT4H1-206ENST00000581204 LRRC7Q96NW7 1537 aa13.07□□□□□ -0.32
SUPT4H1-206ENST00000581204 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
SUPT4H1-206ENST00000581204 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
SUPT4H1-206ENST00000581204 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
SUPT4H1-206ENST00000581204 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
SUPT4H1-206ENST00000581204 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
SUPT4H1-206ENST00000581204 SYNMO15061 1565 aa13.05□□□□□ -0.32
SUPT4H1-206ENST00000581204 SAMD9LQ8IVG5 1584 aa13.05□□□□□ -0.32
SUPT4H1-206ENST00000581204 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
SUPT4H1-206ENST00000581204 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
SUPT4H1-206ENST00000581204 MED14O60244 1454 aa13.04□□□□□ -0.32
SUPT4H1-206ENST00000581204 BCANQ96GW7 911 aa13.03□□□□□ -0.32
SUPT4H1-206ENST00000581204 DEPDC5O75140 1603 aa13.02□□□□□ -0.32
SUPT4H1-206ENST00000581204 PPARGC1BQ86YN6 1023 aaKnown RBP13.02□□□□□ -0.33
SUPT4H1-206ENST00000581204 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
SUPT4H1-206ENST00000581204 ATP1B4Q9UN42 357 aaPredicted RBP13.01□□□□□ -0.33
SUPT4H1-206ENST00000581204 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
SUPT4H1-206ENST00000581204 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
SUPT4H1-206ENST00000581204 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
SUPT4H1-206ENST00000581204 NPHP4O75161 1426 aaPredicted RBP12.99□□□□□ -0.33
SUPT4H1-206ENST00000581204 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
SUPT4H1-206ENST00000581204 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.333e-10■■□□□ 14.3
SUPT4H1-206ENST00000581204 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
SUPT4H1-206ENST00000581204 ATP7AQ04656 1500 aa12.97□□□□□ -0.33
SUPT4H1-206ENST00000581204 A2MP01023 1474 aa12.97□□□□□ -0.33
SUPT4H1-206ENST00000581204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
SUPT4H1-206ENST00000581204 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.33
SUPT4H1-206ENST00000581204 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms