RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 ARHGEF40Q8TER5 1519 aa10.29□□□□□ -0.76
SENP3-206ENST00000581093 POTEFA5A3E0 1075 aa10.29□□□□□ -0.76
SENP3-206ENST00000581093 PDIA4P13667 645 aaKnown RBP10.29□□□□□ -0.76
SENP3-206ENST00000581093 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
SENP3-206ENST00000581093 PTPRTO14522 1441 aa10.29□□□□□ -0.76
SENP3-206ENST00000581093 FANCAO15360 1455 aa10.28□□□□□ -0.76
SENP3-206ENST00000581093 SETD1BQ9UPS6 1966 aaKnown RBP10.28□□□□□ -0.76
SENP3-206ENST00000581093 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.76
SENP3-206ENST00000581093 FER1L4A9Z1Z3 1794 aa10.26□□□□□ -0.77
SENP3-206ENST00000581093 ABCA9Q8IUA7 1624 aa10.26□□□□□ -0.77
SENP3-206ENST00000581093 TMEM132AQ24JP5 1023 aa10.26□□□□□ -0.77
SENP3-206ENST00000581093 ABCA8O94911 1581 aa10.26□□□□□ -0.77
SENP3-206ENST00000581093 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
SENP3-206ENST00000581093 ST18O60284 1047 aa10.25□□□□□ -0.77
SENP3-206ENST00000581093 MLECQ14165 292 aa10.25□□□□□ -0.77
SENP3-206ENST00000581093 MED1Q15648 1581 aaPredicted RBP10.25□□□□□ -0.77
SENP3-206ENST00000581093 AKNAQ7Z591 1439 aa10.24□□□□□ -0.77
SENP3-206ENST00000581093 SIGLEC1Q9BZZ2 1709 aa10.23□□□□□ -0.77
SENP3-206ENST00000581093 CEBPAP49715 358 aaPredicted RBP10.22□□□□□ -0.77
SENP3-206ENST00000581093 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
SENP3-206ENST00000581093 RICTORQ6R327 1708 aa10.21□□□□□ -0.77
SENP3-206ENST00000581093 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.78
SENP3-206ENST00000581093 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
SENP3-206ENST00000581093 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
SENP3-206ENST00000581093 ZFYVE16Q7Z3T8 1539 aa10.18□□□□□ -0.78
SENP3-206ENST00000581093 ARHGEF12Q9NZN5 1544 aa10.18□□□□□ -0.78
SENP3-206ENST00000581093 ATP10BO94823 1461 aa10.18□□□□□ -0.78
SENP3-206ENST00000581093 HSPA1LP34931 641 aa10.18□□□□□ -0.78
SENP3-206ENST00000581093 STAG3Q9UJ98 1225 aa10.18□□□□□ -0.78
SENP3-206ENST00000581093 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
SENP3-206ENST00000581093 ZMYM4Q5VZL5 1548 aa10.17□□□□□ -0.78
SENP3-206ENST00000581093 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
SENP3-206ENST00000581093 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
SENP3-206ENST00000581093 NEFLP07196 543 aa10.16□□□□□ -0.78
SENP3-206ENST00000581093 CDK11AQ9UQ88 783 aaPredicted RBP10.16□□□□□ -0.78
SENP3-206ENST00000581093 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
SENP3-206ENST00000581093 RAPGEF2Q9Y4G8 1499 aa10.15□□□□□ -0.78
SENP3-206ENST00000581093 NCOA1Q15788 1441 aa10.15□□□□□ -0.79
SENP3-206ENST00000581093 ZNF335Q9H4Z2 1342 aaPredicted RBP10.14□□□□□ -0.79
SENP3-206ENST00000581093 BMP2KQ9NSY1 1161 aaPredicted RBP10.14□□□□□ -0.79
SENP3-206ENST00000581093 COLQQ9Y215 455 aaPredicted RBP10.13□□□□□ -0.79
SENP3-206ENST00000581093 HRCP23327 699 aa10.12□□□□□ -0.79
SENP3-206ENST00000581093 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
SENP3-206ENST00000581093 SLAIN1Q8ND83 568 aa10.12□□□□□ -0.79
SENP3-206ENST00000581093 ATP10AO60312 1499 aa10.11□□□□□ -0.79
SENP3-206ENST00000581093 LOC105371045A0A1W2PR82 267 aa10.11□□□□□ -0.79
SENP3-206ENST00000581093 SEC24BO95487 1268 aa10.11□□□□□ -0.79
SENP3-206ENST00000581093 PIP4K2BP78356 416 aa10.11□□□□□ -0.79
SENP3-206ENST00000581093 PDE4CQ08493 712 aa10.11□□□□□ -0.79
SENP3-206ENST00000581093 TRIM26Q12899 539 aaPredicted RBP10.11□□□□□ -0.79
SENP3-206ENST00000581093 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
SENP3-206ENST00000581093 CFAP74Q9C0B2 1584 aa10.1□□□□□ -0.79
SENP3-206ENST00000581093 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
SENP3-206ENST00000581093 C9orf84Q5VXU9 1444 aa10.09□□□□□ -0.79
SENP3-206ENST00000581093 CENPBP07199 599 aaPredicted RBP10.09□□□□□ -0.79
SENP3-206ENST00000581093 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
SENP3-206ENST00000581093 TRAPPC8Q9Y2L5 1435 aa10.08□□□□□ -0.8
SENP3-206ENST00000581093 TOM1O60784 492 aa10.08□□□□□ -0.8
SENP3-206ENST00000581093 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 C3P01024 1663 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 TRPC6Q9Y210 931 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
SENP3-206ENST00000581093 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
SENP3-206ENST00000581093 PKNOX2Q96KN3 472 aa10.06□□□□□ -0.8
SENP3-206ENST00000581093 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
SENP3-206ENST00000581093 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
SENP3-206ENST00000581093 RGS17Q9UGC6 210 aaPredicted RBP10.05□□□□□ -0.8
SENP3-206ENST00000581093 SCAPERQ9BY12 1400 aa10.04□□□□□ -0.8
SENP3-206ENST00000581093 PKD2Q13563 968 aa10.03□□□□□ -0.8
SENP3-206ENST00000581093 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
SENP3-206ENST00000581093 PLEKHD1A6NEE1 506 aa10.02□□□□□ -0.81
SENP3-206ENST00000581093 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
SENP3-206ENST00000581093 TIE1P35590 1138 aa10.02□□□□□ -0.81
SENP3-206ENST00000581093 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
SENP3-206ENST00000581093 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
SENP3-206ENST00000581093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.02□□□□□ -0.81
SENP3-206ENST00000581093 RAPGEF6Q8TEU7 1601 aa10.01□□□□□ -0.81
SENP3-206ENST00000581093 HMGB1P09429 215 aaKnown RBP10.01□□□□□ -0.81
SENP3-206ENST00000581093 CCDC61Q9Y6R9 512 aa10.01□□□□□ -0.81
SENP3-206ENST00000581093 MARVELD3Q96A59 401 aa10□□□□□ -0.81
SENP3-206ENST00000581093 KIF12Q96FN5 646 aa10□□□□□ -0.81
SENP3-206ENST00000581093 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
SENP3-206ENST00000581093 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
SENP3-206ENST00000581093 NPATQ14207 1427 aa9.98□□□□□ -0.81
SENP3-206ENST00000581093 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
SENP3-206ENST00000581093 CPS1P31327 1500 aa9.97□□□□□ -0.81
SENP3-206ENST00000581093 PTPRKQ15262 1439 aa9.97□□□□□ -0.81
SENP3-206ENST00000581093 CNTLNQ9NXG0 1405 aa9.97□□□□□ -0.81
SENP3-206ENST00000581093 TTLL13PA6NNM8 815 aa9.96□□□□□ -0.82
SENP3-206ENST00000581093 POTEAQ6S8J7 498 aa9.96□□□□□ -0.82
SENP3-206ENST00000581093 PLCH2O75038 1416 aa9.96□□□□□ -0.82
SENP3-206ENST00000581093 AGLP35573 1532 aa9.96□□□□□ -0.82
SENP3-206ENST00000581093 REREQ9P2R6 1566 aa9.96□□□□□ -0.82
SENP3-206ENST00000581093 ALKQ9UM73 1620 aa9.95□□□□□ -0.82
SENP3-206ENST00000581093 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
SENP3-206ENST00000581093 DIP2CQ9Y2E4 1556 aa9.94□□□□□ -0.82
SENP3-206ENST00000581093 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms