RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 EPAS1Q99814 870 aa13.78□□□□□ -0.2
VNN3-214ENST00000580813 GOLGA8CPA6NN73 597 aa13.76□□□□□ -0.21
VNN3-214ENST00000580813 BHMG1C9JSJ3 638 aaPredicted RBP13.76□□□□□ -0.21
VNN3-214ENST00000580813 COL9A1P20849 921 aa13.76□□□□□ -0.21
VNN3-214ENST00000580813 MRPL50Q8N5N7 158 aaKnown RBP13.76□□□□□ -0.21
VNN3-214ENST00000580813 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
VNN3-214ENST00000580813 PDIA6Q15084 440 aa13.74□□□□□ -0.21
VNN3-214ENST00000580813 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
VNN3-214ENST00000580813 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
VNN3-214ENST00000580813 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
VNN3-214ENST00000580813 PTPN5P54829 565 aa13.72□□□□□ -0.21
VNN3-214ENST00000580813 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
VNN3-214ENST00000580813 NBR1Q14596 966 aa13.71□□□□□ -0.21
VNN3-214ENST00000580813 PLA2G2EQ9NZK7 142 aa13.7□□□□□ -0.22
VNN3-214ENST00000580813 WNT2BQ93097 391 aa13.69□□□□□ -0.22
VNN3-214ENST00000580813 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
VNN3-214ENST00000580813 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
VNN3-214ENST00000580813 MAP3K7O43318 606 aa13.66□□□□□ -0.22
VNN3-214ENST00000580813 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
VNN3-214ENST00000580813 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
VNN3-214ENST00000580813 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
VNN3-214ENST00000580813 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
VNN3-214ENST00000580813 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
VNN3-214ENST00000580813 TSR1Q2NL82 804 aaKnown RBP13.63□□□□□ -0.23
VNN3-214ENST00000580813 TRIM6-TRIM34B2RNG4 842 aa13.59□□□□□ -0.23
VNN3-214ENST00000580813 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.24
VNN3-214ENST00000580813 ANKK1Q8NFD2 765 aa13.58□□□□□ -0.24
VNN3-214ENST00000580813 SEPT9Q9UHD8 586 aaPredicted RBP13.58□□□□□ -0.24
VNN3-214ENST00000580813 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
VNN3-214ENST00000580813 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
VNN3-214ENST00000580813 ZFRQ96KR1 1074 aaKnown RBP13.54□□□□□ -0.24
VNN3-214ENST00000580813 BCAMP50895 628 aa13.52□□□□□ -0.25
VNN3-214ENST00000580813 PACS2Q86VP3 889 aa13.52□□□□□ -0.25
VNN3-214ENST00000580813 OSBPP22059 807 aa13.51□□□□□ -0.25
VNN3-214ENST00000580813 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
VNN3-214ENST00000580813 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
VNN3-214ENST00000580813 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
VNN3-214ENST00000580813 SOWAHBA6NEL2 793 aa13.48□□□□□ -0.25
VNN3-214ENST00000580813 CERKQ8TCT0 537 aa13.48□□□□□ -0.25
VNN3-214ENST00000580813 PRSS12P56730 875 aa13.47□□□□□ -0.25
VNN3-214ENST00000580813 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
VNN3-214ENST00000580813 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
VNN3-214ENST00000580813 CDHR5Q9HBB8 845 aa13.47□□□□□ -0.25
VNN3-214ENST00000580813 SMAPO00193 183 aa13.43□□□□□ -0.26
VNN3-214ENST00000580813 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
VNN3-214ENST00000580813 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
VNN3-214ENST00000580813 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
VNN3-214ENST00000580813 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
VNN3-214ENST00000580813 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
VNN3-214ENST00000580813 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
VNN3-214ENST00000580813 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
VNN3-214ENST00000580813 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
VNN3-214ENST00000580813 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
VNN3-214ENST00000580813 TATDN2Q93075 761 aa13.38□□□□□ -0.27
VNN3-214ENST00000580813 TSR3Q9UJK0 312 aaKnown RBP13.37□□□□□ -0.27
VNN3-214ENST00000580813 C3orf80F5H4A9 247 aa13.36□□□□□ -0.27
VNN3-214ENST00000580813 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
VNN3-214ENST00000580813 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
VNN3-214ENST00000580813 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
VNN3-214ENST00000580813 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
VNN3-214ENST00000580813 SAMD7Q7Z3H4 446 aa13.34□□□□□ -0.27
VNN3-214ENST00000580813 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
VNN3-214ENST00000580813 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
VNN3-214ENST00000580813 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
VNN3-214ENST00000580813 PPP4CP60510 307 aa13.32□□□□□ -0.28
VNN3-214ENST00000580813 ITGBL1O95965 494 aaPredicted RBP13.29□□□□□ -0.28
VNN3-214ENST00000580813 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
VNN3-214ENST00000580813 A0A0G2JS52 829 aa13.28□□□□□ -0.28
VNN3-214ENST00000580813 RNF40O75150 1001 aa13.28□□□□□ -0.28
VNN3-214ENST00000580813 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
VNN3-214ENST00000580813 SEMA3EO15041 775 aa13.26□□□□□ -0.29
VNN3-214ENST00000580813 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
VNN3-214ENST00000580813 NUTM2FA1L443 756 aa13.25□□□□□ -0.29
VNN3-214ENST00000580813 KCNC4Q03721 635 aa13.25□□□□□ -0.29
VNN3-214ENST00000580813 PTGDRQ13258 359 aa13.23□□□□□ -0.29
VNN3-214ENST00000580813 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
VNN3-214ENST00000580813 RGS20O76081 388 aa13.19□□□□□ -0.3
VNN3-214ENST00000580813 EYA1Q99502 592 aa13.18□□□□□ -0.3
VNN3-214ENST00000580813 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
VNN3-214ENST00000580813 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
VNN3-214ENST00000580813 FCHSD2O94868 740 aa13.14□□□□□ -0.31
VNN3-214ENST00000580813 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
VNN3-214ENST00000580813 APLP1P51693 650 aa13.12□□□□□ -0.31
VNN3-214ENST00000580813 TJAP1Q5JTD0 557 aa13.12□□□□□ -0.31
VNN3-214ENST00000580813 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
VNN3-214ENST00000580813 MTRQ99707 1265 aa13.12□□□□□ -0.31
VNN3-214ENST00000580813 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
VNN3-214ENST00000580813 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
VNN3-214ENST00000580813 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
VNN3-214ENST00000580813 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
VNN3-214ENST00000580813 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
VNN3-214ENST00000580813 DNAJB2P25686 324 aa13.09□□□□□ -0.31
VNN3-214ENST00000580813 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
VNN3-214ENST00000580813 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
VNN3-214ENST00000580813 RCCD1A6NED2 376 aa13.05□□□□□ -0.32
VNN3-214ENST00000580813 ZNF516Q92618 1163 aa13.05□□□□□ -0.32
VNN3-214ENST00000580813 IRX2Q9BZI1 471 aaPredicted RBP13.05□□□□□ -0.32
VNN3-214ENST00000580813 COPS2P61201 443 aa13.04□□□□□ -0.32
VNN3-214ENST00000580813 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
VNN3-214ENST00000580813 HIC1Q14526 733 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms