RNA–Protein interactions for RNA: ENST00000579796.1

ARHGAP28-211, Transcript of Rho GTPase activating protein 28, humanhuman

Gene ARHGAP28, Length 1,960 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-211ENST00000579796 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
ARHGAP28-211ENST00000579796 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
ARHGAP28-211ENST00000579796 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
ARHGAP28-211ENST00000579796 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
ARHGAP28-211ENST00000579796 HIC1Q14526 733 aa13.02□□□□□ -0.32
ARHGAP28-211ENST00000579796 OSBPP22059 807 aa13□□□□□ -0.33
ARHGAP28-211ENST00000579796 DSG2Q14126 1118 aa13□□□□□ -0.33
ARHGAP28-211ENST00000579796 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
ARHGAP28-211ENST00000579796 SNRKQ9NRH2 765 aa13□□□□□ -0.33
ARHGAP28-211ENST00000579796 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
ARHGAP28-211ENST00000579796 MAP3K13O43283 966 aa12.99□□□□□ -0.33
ARHGAP28-211ENST00000579796 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
ARHGAP28-211ENST00000579796 PPP1R15AO75807 674 aaPredicted RBP12.97□□□□□ -0.33
ARHGAP28-211ENST00000579796 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.33
ARHGAP28-211ENST00000579796 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.34
ARHGAP28-211ENST00000579796 FCHSD2O94868 740 aa12.95□□□□□ -0.34
ARHGAP28-211ENST00000579796 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
ARHGAP28-211ENST00000579796 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
ARHGAP28-211ENST00000579796 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
ARHGAP28-211ENST00000579796 CARNS1A5YM72 827 aa12.93□□□□□ -0.34
ARHGAP28-211ENST00000579796 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
ARHGAP28-211ENST00000579796 HSP90B1P14625 803 aaKnown RBP12.9□□□□□ -0.34
ARHGAP28-211ENST00000579796 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
ARHGAP28-211ENST00000579796 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
ARHGAP28-211ENST00000579796 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
ARHGAP28-211ENST00000579796 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
ARHGAP28-211ENST00000579796 ATP1B4Q9UN42 357 aaPredicted RBP12.9□□□□□ -0.34
ARHGAP28-211ENST00000579796 POM121CA8CG34 1229 aa12.89□□□□□ -0.35
ARHGAP28-211ENST00000579796 PUS7Q96PZ0 661 aaKnown RBP12.89□□□□□ -0.35
ARHGAP28-211ENST00000579796 PTGDRQ13258 359 aa12.89□□□□□ -0.35
ARHGAP28-211ENST00000579796 CALR3Q96L12 384 aaKnown RBP12.89□□□□□ -0.35
ARHGAP28-211ENST00000579796 GDPD2Q9HCC8 539 aa12.89□□□□□ -0.35
ARHGAP28-211ENST00000579796 BRD1O95696 1058 aa12.88□□□□□ -0.35
ARHGAP28-211ENST00000579796 CDK11BP21127 795 aaKnown RBP12.88□□□□□ -0.35
ARHGAP28-211ENST00000579796 CDK11AQ9UQ88 783 aaPredicted RBP12.88□□□□□ -0.35
ARHGAP28-211ENST00000579796 KCNA1Q09470 495 aa12.87□□□□□ -0.35
ARHGAP28-211ENST00000579796 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
ARHGAP28-211ENST00000579796 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
ARHGAP28-211ENST00000579796 BEGAINQ9BUH8 593 aa12.87□□□□□ -0.35
ARHGAP28-211ENST00000579796 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
ARHGAP28-211ENST00000579796 MDM2Q00987 491 aaPredicted RBP12.86□□□□□ -0.35
ARHGAP28-211ENST00000579796 GLMNQ92990 594 aa12.85□□□□□ -0.35
ARHGAP28-211ENST00000579796 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
ARHGAP28-211ENST00000579796 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
ARHGAP28-211ENST00000579796 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
ARHGAP28-211ENST00000579796 DDX12PQ92771 950 aa12.84□□□□□ -0.35
ARHGAP28-211ENST00000579796 NESP48681 1621 aa12.84□□□□□ -0.35
ARHGAP28-211ENST00000579796 CCDC27Q2M243 656 aa12.83□□□□□ -0.35
ARHGAP28-211ENST00000579796 RFC5P40937 340 aa12.83□□□□□ -0.36
ARHGAP28-211ENST00000579796 GPCPD1Q9NPB8 672 aa12.83□□□□□ -0.36
ARHGAP28-211ENST00000579796 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.82□□□□□ -0.36
ARHGAP28-211ENST00000579796 TBC1D12O60347 775 aa12.82□□□□□ -0.36
ARHGAP28-211ENST00000579796 FOXK1P85037 733 aa12.82□□□□□ -0.36
ARHGAP28-211ENST00000579796 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
ARHGAP28-211ENST00000579796 MTMR14Q8NCE2 650 aa12.82□□□□□ -0.36
ARHGAP28-211ENST00000579796 PATL2C9JE40 543 aaKnown RBP12.81□□□□□ -0.36
ARHGAP28-211ENST00000579796 CLCN1P35523 988 aa12.81□□□□□ -0.36
ARHGAP28-211ENST00000579796 BANK1Q8NDB2 785 aa12.81□□□□□ -0.36
ARHGAP28-211ENST00000579796 PDE4CQ08493 712 aa12.8□□□□□ -0.36
ARHGAP28-211ENST00000579796 IVNS1ABPQ9Y6Y0 642 aa12.8□□□□□ -0.36
ARHGAP28-211ENST00000579796 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
ARHGAP28-211ENST00000579796 RFX1P22670 979 aa12.78□□□□□ -0.36
ARHGAP28-211ENST00000579796 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.37
ARHGAP28-211ENST00000579796 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
ARHGAP28-211ENST00000579796 PLPP6Q8IY26 295 aa12.76□□□□□ -0.37
ARHGAP28-211ENST00000579796 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 ABL2P42684 1182 aa12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 SND1Q7KZF4 910 aaKnown RBP eCLIP12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 NLRP7Q8WX94 980 aa12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 IGSF5Q9NSI5 407 aa12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 USTQ9Y2C2 406 aa12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 LAMC3Q9Y6N6 1575 aa12.75□□□□□ -0.37
ARHGAP28-211ENST00000579796 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
ARHGAP28-211ENST00000579796 PTGER2P43116 358 aa12.74□□□□□ -0.37
ARHGAP28-211ENST00000579796 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
ARHGAP28-211ENST00000579796 ADAMTS19Q8TE59 1207 aa12.74□□□□□ -0.37
ARHGAP28-211ENST00000579796 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
ARHGAP28-211ENST00000579796 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
ARHGAP28-211ENST00000579796 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
ARHGAP28-211ENST00000579796 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
ARHGAP28-211ENST00000579796 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
ARHGAP28-211ENST00000579796 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
ARHGAP28-211ENST00000579796 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
ARHGAP28-211ENST00000579796 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
ARHGAP28-211ENST00000579796 CFTRP13569 1480 aa12.71□□□□□ -0.37
ARHGAP28-211ENST00000579796 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
ARHGAP28-211ENST00000579796 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
ARHGAP28-211ENST00000579796 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
ARHGAP28-211ENST00000579796 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
ARHGAP28-211ENST00000579796 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
ARHGAP28-211ENST00000579796 CDHR5Q9HBB8 845 aa12.7□□□□□ -0.38
ARHGAP28-211ENST00000579796 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
ARHGAP28-211ENST00000579796 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
ARHGAP28-211ENST00000579796 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
ARHGAP28-211ENST00000579796 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
ARHGAP28-211ENST00000579796 TMC2Q8TDI7 906 aa12.68□□□□□ -0.38
ARHGAP28-211ENST00000579796 TMEM259Q4ZIN3 620 aa12.67□□□□□ -0.38
ARHGAP28-211ENST00000579796 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
ARHGAP28-211ENST00000579796 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
ARHGAP28-211ENST00000579796 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms