RNA–Protein interactions for RNA: ENST00000579796.1

ARHGAP28-211, Transcript of Rho GTPase activating protein 28, humanhuman

Gene ARHGAP28, Length 1,960 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-211ENST00000579796 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
ARHGAP28-211ENST00000579796 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
ARHGAP28-211ENST00000579796 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.07
ARHGAP28-211ENST00000579796 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
ARHGAP28-211ENST00000579796 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
ARHGAP28-211ENST00000579796 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
ARHGAP28-211ENST00000579796 KCNA4P22459 653 aa19.63■□□□□ 0.73
ARHGAP28-211ENST00000579796 ADRA2BP18089 450 aa19.28■□□□□ 0.68
ARHGAP28-211ENST00000579796 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
ARHGAP28-211ENST00000579796 FOXD1Q16676 465 aa19.24■□□□□ 0.67
ARHGAP28-211ENST00000579796 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
ARHGAP28-211ENST00000579796 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
ARHGAP28-211ENST00000579796 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
ARHGAP28-211ENST00000579796 RTN4Q9NQC3 1192 aaKnown RBP18.56■□□□□ 0.56
ARHGAP28-211ENST00000579796 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
ARHGAP28-211ENST00000579796 AMER1Q5JTC6 1135 aaPredicted RBP18.24■□□□□ 0.51
ARHGAP28-211ENST00000579796 ZBTB22O15209 634 aa18.21■□□□□ 0.5
ARHGAP28-211ENST00000579796 PPP4R3CPQ6ZMV5 832 aa18.17■□□□□ 0.5
ARHGAP28-211ENST00000579796 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
ARHGAP28-211ENST00000579796 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
ARHGAP28-211ENST00000579796 MSH5O43196 834 aa17.72■□□□□ 0.43
ARHGAP28-211ENST00000579796 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
ARHGAP28-211ENST00000579796 FKBP8Q14318 412 aa17.23■□□□□ 0.35
ARHGAP28-211ENST00000579796 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
ARHGAP28-211ENST00000579796 NISCHQ9Y2I1 1504 aa17.19■□□□□ 0.34
ARHGAP28-211ENST00000579796 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
ARHGAP28-211ENST00000579796 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
ARHGAP28-211ENST00000579796 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
ARHGAP28-211ENST00000579796 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
ARHGAP28-211ENST00000579796 PLCB2Q00722 1185 aa16.87■□□□□ 0.29
ARHGAP28-211ENST00000579796 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
ARHGAP28-211ENST00000579796 BCANQ96GW7 911 aa16.67■□□□□ 0.26
ARHGAP28-211ENST00000579796 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
ARHGAP28-211ENST00000579796 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
ARHGAP28-211ENST00000579796 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
ARHGAP28-211ENST00000579796 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
ARHGAP28-211ENST00000579796 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
ARHGAP28-211ENST00000579796 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
ARHGAP28-211ENST00000579796 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
ARHGAP28-211ENST00000579796 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
ARHGAP28-211ENST00000579796 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
ARHGAP28-211ENST00000579796 VSIG10Q8N0Z9 540 aa16.32■□□□□ 0.2
ARHGAP28-211ENST00000579796 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
ARHGAP28-211ENST00000579796 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
ARHGAP28-211ENST00000579796 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
ARHGAP28-211ENST00000579796 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
ARHGAP28-211ENST00000579796 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
ARHGAP28-211ENST00000579796 FBLN2P98095 1184 aa16.12■□□□□ 0.17
ARHGAP28-211ENST00000579796 TULP1O00294 542 aaPredicted RBP16.07■□□□□ 0.16
ARHGAP28-211ENST00000579796 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
ARHGAP28-211ENST00000579796 PKD2Q13563 968 aa15.97■□□□□ 0.15
ARHGAP28-211ENST00000579796 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
ARHGAP28-211ENST00000579796 ARXQ96QS3 562 aa15.94■□□□□ 0.14
ARHGAP28-211ENST00000579796 IFNLR1Q8IU57 520 aaPredicted RBP15.91■□□□□ 0.14
ARHGAP28-211ENST00000579796 VASPP50552 380 aaPredicted RBP15.87■□□□□ 0.13
ARHGAP28-211ENST00000579796 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
ARHGAP28-211ENST00000579796 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
ARHGAP28-211ENST00000579796 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
ARHGAP28-211ENST00000579796 BBXQ8WY36 941 aaPredicted RBP15.76■□□□□ 0.11
ARHGAP28-211ENST00000579796 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
ARHGAP28-211ENST00000579796 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
ARHGAP28-211ENST00000579796 TSHZ2Q9NRE2 1034 aa15.69■□□□□ 0.1
ARHGAP28-211ENST00000579796 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
ARHGAP28-211ENST00000579796 PROM2Q8N271 834 aa15.67■□□□□ 0.1
ARHGAP28-211ENST00000579796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
ARHGAP28-211ENST00000579796 HOMEZQ8IX15 550 aa15.53■□□□□ 0.08
ARHGAP28-211ENST00000579796 TMEM132AQ24JP5 1023 aa15.51■□□□□ 0.07
ARHGAP28-211ENST00000579796 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
ARHGAP28-211ENST00000579796 NBR1Q14596 966 aa15.46■□□□□ 0.07
ARHGAP28-211ENST00000579796 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
ARHGAP28-211ENST00000579796 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
ARHGAP28-211ENST00000579796 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
ARHGAP28-211ENST00000579796 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
ARHGAP28-211ENST00000579796 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
ARHGAP28-211ENST00000579796 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
ARHGAP28-211ENST00000579796 RGL2O15211 777 aa15.4■□□□□ 0.06
ARHGAP28-211ENST00000579796 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
ARHGAP28-211ENST00000579796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
ARHGAP28-211ENST00000579796 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
ARHGAP28-211ENST00000579796 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
ARHGAP28-211ENST00000579796 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
ARHGAP28-211ENST00000579796 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
ARHGAP28-211ENST00000579796 KLHL34Q8N239 644 aa15.18■□□□□ 0.02
ARHGAP28-211ENST00000579796 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
ARHGAP28-211ENST00000579796 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
ARHGAP28-211ENST00000579796 APLP2Q06481 763 aa15.13■□□□□ 0.01
ARHGAP28-211ENST00000579796 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
ARHGAP28-211ENST00000579796 PODXL2Q9NZ53 605 aa15.04■□□□□ -0
ARHGAP28-211ENST00000579796 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
ARHGAP28-211ENST00000579796 HS6ST3Q8IZP7 471 aa14.89□□□□□ -0.03
ARHGAP28-211ENST00000579796 NKX1-1Q15270 411 aaPredicted RBP14.87□□□□□ -0.03
ARHGAP28-211ENST00000579796 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
ARHGAP28-211ENST00000579796 CAPN15O75808 1086 aa14.86□□□□□ -0.03
ARHGAP28-211ENST00000579796 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
ARHGAP28-211ENST00000579796 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
ARHGAP28-211ENST00000579796 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
ARHGAP28-211ENST00000579796 BRPF1P55201 1214 aaPredicted RBP14.82□□□□□ -0.04
ARHGAP28-211ENST00000579796 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
ARHGAP28-211ENST00000579796 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
ARHGAP28-211ENST00000579796 GTPBP6O43824 516 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms