RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 MRRFQ96E11 262 aaKnown RBP13.23□□□□□ -0.29
PCAT18-201ENST00000579458 GORABQ5T7V8 394 aa13.22□□□□□ -0.29
PCAT18-201ENST00000579458 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
PCAT18-201ENST00000579458 TRIM66O15016 1216 aa13.21□□□□□ -0.29
PCAT18-201ENST00000579458 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
PCAT18-201ENST00000579458 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
PCAT18-201ENST00000579458 IVNS1ABPQ9Y6Y0 642 aa13.2□□□□□ -0.3
PCAT18-201ENST00000579458 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
PCAT18-201ENST00000579458 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
PCAT18-201ENST00000579458 NME8Q8N427 588 aa13.19□□□□□ -0.3
PCAT18-201ENST00000579458 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
PCAT18-201ENST00000579458 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
PCAT18-201ENST00000579458 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
PCAT18-201ENST00000579458 SKIV2LQ15477 1246 aaKnown RBP13.15□□□□□ -0.3
PCAT18-201ENST00000579458 KLHL42Q9P2K6 505 aa13.15□□□□□ -0.3
PCAT18-201ENST00000579458 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
PCAT18-201ENST00000579458 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
PCAT18-201ENST00000579458 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
PCAT18-201ENST00000579458 SND1Q7KZF4 910 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCAT18-201ENST00000579458 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
PCAT18-201ENST00000579458 FOXD4Q12950 439 aaPredicted RBP13.13□□□□□ -0.31
PCAT18-201ENST00000579458 RALBP1Q15311 655 aa13.13□□□□□ -0.31
PCAT18-201ENST00000579458 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
PCAT18-201ENST00000579458 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
PCAT18-201ENST00000579458 STK25O00506 426 aa13.12□□□□□ -0.31
PCAT18-201ENST00000579458 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
PCAT18-201ENST00000579458 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
PCAT18-201ENST00000579458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCAT18-201ENST00000579458 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
PCAT18-201ENST00000579458 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
PCAT18-201ENST00000579458 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
PCAT18-201ENST00000579458 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
PCAT18-201ENST00000579458 FAM193AP78312 1265 aa13.09□□□□□ -0.31
PCAT18-201ENST00000579458 KCNA1Q09470 495 aa13.09□□□□□ -0.31
PCAT18-201ENST00000579458 NEFMP07197 916 aa13.08□□□□□ -0.32
PCAT18-201ENST00000579458 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
PCAT18-201ENST00000579458 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
PCAT18-201ENST00000579458 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
PCAT18-201ENST00000579458 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
PCAT18-201ENST00000579458 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
PCAT18-201ENST00000579458 TCF3P15923 654 aa13.05□□□□□ -0.32
PCAT18-201ENST00000579458 HMGXB3Q12766 1538 aa13.05□□□□□ -0.32
PCAT18-201ENST00000579458 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
PCAT18-201ENST00000579458 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
PCAT18-201ENST00000579458 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
PCAT18-201ENST00000579458 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
PCAT18-201ENST00000579458 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
PCAT18-201ENST00000579458 PAX3P23760 479 aa13.02□□□□□ -0.33
PCAT18-201ENST00000579458 PNMA2Q9UL42 364 aa13.02□□□□□ -0.33
PCAT18-201ENST00000579458 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCAT18-201ENST00000579458 GLIPR1L2Q4G1C9 344 aa13□□□□□ -0.33
PCAT18-201ENST00000579458 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
PCAT18-201ENST00000579458 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
PCAT18-201ENST00000579458 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
PCAT18-201ENST00000579458 UBXN4Q92575 508 aa12.97□□□□□ -0.33
PCAT18-201ENST00000579458 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
PCAT18-201ENST00000579458 PMM1Q92871 262 aa12.96□□□□□ -0.33
PCAT18-201ENST00000579458 MORC4Q8TE76 937 aa12.96□□□□□ -0.34
PCAT18-201ENST00000579458 DPH6Q7L8W6 267 aa12.95□□□□□ -0.34
PCAT18-201ENST00000579458 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
PCAT18-201ENST00000579458 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
PCAT18-201ENST00000579458 GABBR1Q9UBS5 961 aa12.94□□□□□ -0.34
PCAT18-201ENST00000579458 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
PCAT18-201ENST00000579458 ZNF16P17020 682 aaPredicted RBP12.94□□□□□ -0.34
PCAT18-201ENST00000579458 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
PCAT18-201ENST00000579458 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
PCAT18-201ENST00000579458 CREB3O43889 395 aa12.93□□□□□ -0.34
PCAT18-201ENST00000579458 DDRGK1Q96HY6 314 aa12.93□□□□□ -0.34
PCAT18-201ENST00000579458 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.92□□□□□ -0.34
PCAT18-201ENST00000579458 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
PCAT18-201ENST00000579458 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
PCAT18-201ENST00000579458 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
PCAT18-201ENST00000579458 LONRF3Q496Y0 759 aa12.92□□□□□ -0.34
PCAT18-201ENST00000579458 RINLQ6ZS11 566 aa12.92□□□□□ -0.34
PCAT18-201ENST00000579458 NESP48681 1621 aa12.91□□□□□ -0.34
PCAT18-201ENST00000579458 WIZO95785 1651 aa12.91□□□□□ -0.34
PCAT18-201ENST00000579458 KIF4AO95239 1232 aa12.91□□□□□ -0.34
PCAT18-201ENST00000579458 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
PCAT18-201ENST00000579458 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
PCAT18-201ENST00000579458 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
PCAT18-201ENST00000579458 NAALADL2Q58DX5 795 aa12.89□□□□□ -0.35
PCAT18-201ENST00000579458 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
PCAT18-201ENST00000579458 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
PCAT18-201ENST00000579458 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
PCAT18-201ENST00000579458 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
PCAT18-201ENST00000579458 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
PCAT18-201ENST00000579458 SOX12O15370 315 aa12.87□□□□□ -0.35
PCAT18-201ENST00000579458 SH3BP5O60239 455 aa12.87□□□□□ -0.35
PCAT18-201ENST00000579458 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
PCAT18-201ENST00000579458 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
PCAT18-201ENST00000579458 RFX1P22670 979 aa12.86□□□□□ -0.35
PCAT18-201ENST00000579458 E2F4Q16254 413 aa12.86□□□□□ -0.35
PCAT18-201ENST00000579458 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
PCAT18-201ENST00000579458 PARP9Q8IXQ6 854 aa12.86□□□□□ -0.35
PCAT18-201ENST00000579458 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
PCAT18-201ENST00000579458 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
PCAT18-201ENST00000579458 CUX2O14529 1486 aa12.85□□□□□ -0.35
PCAT18-201ENST00000579458 PHF14O94880 888 aa12.84□□□□□ -0.35
PCAT18-201ENST00000579458 TSHZ1Q6ZSZ6 1077 aa12.84□□□□□ -0.35
PCAT18-201ENST00000579458 SMC5Q8IY18 1101 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms