RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
RBFOX3-202ENST00000578998 ARID4BQ4LE39 1312 aaPredicted RBP17.6■□□□□ 0.41
RBFOX3-202ENST00000578998 PLIN1O60240 522 aa17.6■□□□□ 0.41
RBFOX3-202ENST00000578998 RALBP1Q15311 655 aa17.6■□□□□ 0.41
RBFOX3-202ENST00000578998 CCDC144AA2RUR9 1427 aa17.6■□□□□ 0.41
RBFOX3-202ENST00000578998 NOP58Q9Y2X3 529 aaKnown RBP17.59■□□□□ 0.41
RBFOX3-202ENST00000578998 ABCC10Q5T3U5 1492 aa17.59■□□□□ 0.41
RBFOX3-202ENST00000578998 CDC42BPAQ5VT25 1732 aa17.59■□□□□ 0.41
RBFOX3-202ENST00000578998 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.41
RBFOX3-202ENST00000578998 POLR1AO95602 1720 aaPredicted RBP17.58■□□□□ 0.4
RBFOX3-202ENST00000578998 PANK3Q9H999 370 aa17.58■□□□□ 0.4
RBFOX3-202ENST00000578998 KTN1Q86UP2 1357 aaKnown RBP17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 UHRF1BP1Q6BDS2 1440 aa17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 CROCC2H7BZ55 1655 aa17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 NUP160Q12769 1436 aa17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 RRP1P56182 461 aaKnown RBP17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
RBFOX3-202ENST00000578998 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
RBFOX3-202ENST00000578998 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
RBFOX3-202ENST00000578998 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
RBFOX3-202ENST00000578998 ADCY10Q96PN6 1610 aa17.54■□□□□ 0.4
RBFOX3-202ENST00000578998 MYT1LQ9UL68 1186 aa17.53■□□□□ 0.4
RBFOX3-202ENST00000578998 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.4
RBFOX3-202ENST00000578998 ABCA8O94911 1581 aa17.52■□□□□ 0.39
RBFOX3-202ENST00000578998 FAM135AQ9P2D6 1515 aa17.52■□□□□ 0.39
RBFOX3-202ENST00000578998 CCDC141Q6ZP82 1450 aa17.51■□□□□ 0.39
RBFOX3-202ENST00000578998 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
RBFOX3-202ENST00000578998 SHANK2Q9UPX8 1470 aa17.5■□□□□ 0.39
RBFOX3-202ENST00000578998 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 ARHGEF12Q9NZN5 1544 aa17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 PLEKHH2Q8IVE3 1493 aa17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 DEKP35659 375 aaKnown RBP17.49■□□□□ 0.39
RBFOX3-202ENST00000578998 SYCP2Q9BX26 1530 aa17.48■□□□□ 0.39
RBFOX3-202ENST00000578998 TMF1P82094 1093 aa17.48■□□□□ 0.39
RBFOX3-202ENST00000578998 TESK2Q96S53 571 aa17.47■□□□□ 0.39
RBFOX3-202ENST00000578998 IPO9Q96P70 1041 aaKnown RBP17.46■□□□□ 0.39
RBFOX3-202ENST00000578998 SAMD9LQ8IVG5 1584 aa17.46■□□□□ 0.39
RBFOX3-202ENST00000578998 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
RBFOX3-202ENST00000578998 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
RBFOX3-202ENST00000578998 A2MP01023 1474 aa17.44■□□□□ 0.38
RBFOX3-202ENST00000578998 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
RBFOX3-202ENST00000578998 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
RBFOX3-202ENST00000578998 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
RBFOX3-202ENST00000578998 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
RBFOX3-202ENST00000578998 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
RBFOX3-202ENST00000578998 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
RBFOX3-202ENST00000578998 C20orf194Q5TEA3 1177 aa17.41■□□□□ 0.38
RBFOX3-202ENST00000578998 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
RBFOX3-202ENST00000578998 ERBINQ96RT1 1412 aa17.41■□□□□ 0.38
RBFOX3-202ENST00000578998 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
RBFOX3-202ENST00000578998 PDE4AP27815 886 aa17.4■□□□□ 0.38
RBFOX3-202ENST00000578998 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
RBFOX3-202ENST00000578998 CDC42BPBQ9Y5S2 1711 aa17.4■□□□□ 0.38
RBFOX3-202ENST00000578998 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
RBFOX3-202ENST00000578998 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
RBFOX3-202ENST00000578998 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
RBFOX3-202ENST00000578998 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
RBFOX3-202ENST00000578998 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
RBFOX3-202ENST00000578998 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
RBFOX3-202ENST00000578998 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
RBFOX3-202ENST00000578998 COL17A1Q9UMD9 1497 aaPredicted RBP17.35■□□□□ 0.37
RBFOX3-202ENST00000578998 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
RBFOX3-202ENST00000578998 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
RBFOX3-202ENST00000578998 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
RBFOX3-202ENST00000578998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.33■□□□□ 0.37
RBFOX3-202ENST00000578998 PREX2Q70Z35 1606 aa17.33■□□□□ 0.36
RBFOX3-202ENST00000578998 SPAG9O60271 1321 aaKnown RBP17.33■□□□□ 0.36
RBFOX3-202ENST00000578998 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
RBFOX3-202ENST00000578998 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
RBFOX3-202ENST00000578998 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
RBFOX3-202ENST00000578998 E9PCH4 1651 aa17.3■□□□□ 0.36
RBFOX3-202ENST00000578998 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
RBFOX3-202ENST00000578998 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
RBFOX3-202ENST00000578998 KIF3BO15066 747 aa17.29■□□□□ 0.36
RBFOX3-202ENST00000578998 SLC4A3P48751 1232 aa17.29■□□□□ 0.36
RBFOX3-202ENST00000578998 RGS3P49796 1198 aa17.28■□□□□ 0.36
RBFOX3-202ENST00000578998 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
RBFOX3-202ENST00000578998 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
RBFOX3-202ENST00000578998 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
RBFOX3-202ENST00000578998 MAGI2Q86UL8 1455 aa17.27■□□□□ 0.35
RBFOX3-202ENST00000578998 APAF1O14727 1248 aa17.27■□□□□ 0.35
RBFOX3-202ENST00000578998 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
RBFOX3-202ENST00000578998 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
RBFOX3-202ENST00000578998 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
RBFOX3-202ENST00000578998 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
RBFOX3-202ENST00000578998 NEFMP07197 916 aa17.25■□□□□ 0.35
RBFOX3-202ENST00000578998 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
RBFOX3-202ENST00000578998 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
RBFOX3-202ENST00000578998 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
RBFOX3-202ENST00000578998 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
RBFOX3-202ENST00000578998 CHD1O14646 1710 aa17.22■□□□□ 0.35
RBFOX3-202ENST00000578998 MYO5CQ9NQX4 1742 aa17.22■□□□□ 0.35
RBFOX3-202ENST00000578998 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
RBFOX3-202ENST00000578998 UNC13BO14795 1591 aa17.22■□□□□ 0.35
RBFOX3-202ENST00000578998 BCAR3O75815 825 aa17.21■□□□□ 0.35
RBFOX3-202ENST00000578998 PLCH2O75038 1416 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms