RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
TOP2A-203ENST00000577706 PHF14O94880 888 aa10.1□□□□□ -0.79
TOP2A-203ENST00000577706 FBXW7Q969H0 707 aa10.1□□□□□ -0.79
TOP2A-203ENST00000577706 COL9A1P20849 921 aa10.09□□□□□ -0.79
TOP2A-203ENST00000577706 ANKK1Q8NFD2 765 aa10.09□□□□□ -0.79
TOP2A-203ENST00000577706 CADPS2Q86UW7 1296 aa10.08□□□□□ -0.8
TOP2A-203ENST00000577706 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
TOP2A-203ENST00000577706 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
TOP2A-203ENST00000577706 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
TOP2A-203ENST00000577706 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
TOP2A-203ENST00000577706 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
TOP2A-203ENST00000577706 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
TOP2A-203ENST00000577706 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
TOP2A-203ENST00000577706 EPAS1Q99814 870 aa10.04□□□□□ -0.8
TOP2A-203ENST00000577706 ONECUT3O60422 494 aaPredicted RBP10.03□□□□□ -0.8
TOP2A-203ENST00000577706 BCAMP50895 628 aa10.03□□□□□ -0.8
TOP2A-203ENST00000577706 C6orf132Q5T0Z8 1188 aa10.03□□□□□ -0.8
TOP2A-203ENST00000577706 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
TOP2A-203ENST00000577706 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
TOP2A-203ENST00000577706 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
TOP2A-203ENST00000577706 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
TOP2A-203ENST00000577706 ZFRQ96KR1 1074 aaKnown RBP10.02□□□□□ -0.81
TOP2A-203ENST00000577706 DPYSL4O14531 572 aa10.01□□□□□ -0.81
TOP2A-203ENST00000577706 SEPT9Q9UHD8 586 aaPredicted RBP9.99□□□□□ -0.81
TOP2A-203ENST00000577706 TRIM6-TRIM34B2RNG4 842 aa9.97□□□□□ -0.81
TOP2A-203ENST00000577706 RBM33Q96EV2 1170 aaKnown RBP9.97□□□□□ -0.81
TOP2A-203ENST00000577706 WBP1LQ9NX94 342 aa9.97□□□□□ -0.81
TOP2A-203ENST00000577706 DDX12PQ92771 950 aa9.96□□□□□ -0.82
TOP2A-203ENST00000577706 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
TOP2A-203ENST00000577706 KCNC4Q03721 635 aa9.94□□□□□ -0.82
TOP2A-203ENST00000577706 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
TOP2A-203ENST00000577706 TSR3Q9UJK0 312 aaKnown RBP9.92□□□□□ -0.82
TOP2A-203ENST00000577706 LRCH3Q96II8 777 aa9.91□□□□□ -0.82
TOP2A-203ENST00000577706 HPS5Q9UPZ3 1129 aa9.91□□□□□ -0.82
TOP2A-203ENST00000577706 NBR1Q14596 966 aa9.9□□□□□ -0.82
TOP2A-203ENST00000577706 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
TOP2A-203ENST00000577706 MAP3K7O43318 606 aa9.89□□□□□ -0.83
TOP2A-203ENST00000577706 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
TOP2A-203ENST00000577706 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
TOP2A-203ENST00000577706 PDIA6Q15084 440 aa9.87□□□□□ -0.83
TOP2A-203ENST00000577706 TSKSQ9UJT2 592 aa9.87□□□□□ -0.83
TOP2A-203ENST00000577706 TSHZ2Q9NRE2 1034 aa9.86□□□□□ -0.83
TOP2A-203ENST00000577706 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
TOP2A-203ENST00000577706 Q6ZNB5 142 aa9.85□□□□□ -0.83
TOP2A-203ENST00000577706 PPP4CP60510 307 aa9.84□□□□□ -0.83
TOP2A-203ENST00000577706 LAPTM4AQ15012 233 aa9.84□□□□□ -0.83
TOP2A-203ENST00000577706 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
TOP2A-203ENST00000577706 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
TOP2A-203ENST00000577706 PRSS12P56730 875 aa9.81□□□□□ -0.84
TOP2A-203ENST00000577706 SMAPO00193 183 aa9.8□□□□□ -0.84
TOP2A-203ENST00000577706 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
TOP2A-203ENST00000577706 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
TOP2A-203ENST00000577706 E2F4Q16254 413 aa9.79□□□□□ -0.84
TOP2A-203ENST00000577706 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
TOP2A-203ENST00000577706 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
TOP2A-203ENST00000577706 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
TOP2A-203ENST00000577706 TATDN2Q93075 761 aa9.77□□□□□ -0.85
TOP2A-203ENST00000577706 NBPF26B4DH59 902 aa9.76□□□□□ -0.85
TOP2A-203ENST00000577706 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
TOP2A-203ENST00000577706 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
TOP2A-203ENST00000577706 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
TOP2A-203ENST00000577706 ARIH1Q9Y4X5 557 aaPredicted RBP9.74□□□□□ -0.85
TOP2A-203ENST00000577706 C3orf80F5H4A9 247 aa9.73□□□□□ -0.85
TOP2A-203ENST00000577706 GFRA3O60609 400 aa9.73□□□□□ -0.85
TOP2A-203ENST00000577706 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
TOP2A-203ENST00000577706 MTRQ99707 1265 aa9.73□□□□□ -0.85
TOP2A-203ENST00000577706 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
TOP2A-203ENST00000577706 OSBPP22059 807 aa9.71□□□□□ -0.86
TOP2A-203ENST00000577706 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
TOP2A-203ENST00000577706 NUDT18Q6ZVK8 323 aa9.71□□□□□ -0.86
TOP2A-203ENST00000577706 PRKD2Q9BZL6 878 aa9.71□□□□□ -0.86
TOP2A-203ENST00000577706 RNF40O75150 1001 aa9.7□□□□□ -0.86
TOP2A-203ENST00000577706 PPP1R18Q6NYC8 613 aa9.7□□□□□ -0.86
TOP2A-203ENST00000577706 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
TOP2A-203ENST00000577706 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
TOP2A-203ENST00000577706 TRAF7Q6Q0C0 670 aa9.68□□□□□ -0.86
TOP2A-203ENST00000577706 ZNF516Q92618 1163 aa9.68□□□□□ -0.86
TOP2A-203ENST00000577706 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
TOP2A-203ENST00000577706 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
TOP2A-203ENST00000577706 APLP1P51693 650 aa9.66□□□□□ -0.86
TOP2A-203ENST00000577706 NECTIN2Q92692 538 aa9.66□□□□□ -0.86
TOP2A-203ENST00000577706 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
TOP2A-203ENST00000577706 LCE2BO14633 110 aa9.64□□□□□ -0.87
TOP2A-203ENST00000577706 SWT1Q5T5J6 900 aaKnown RBP9.63□□□□□ -0.87
TOP2A-203ENST00000577706 PADI6Q6TGC4 694 aa9.63□□□□□ -0.87
TOP2A-203ENST00000577706 TTC13Q8NBP0 860 aa9.63□□□□□ -0.87
TOP2A-203ENST00000577706 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
TOP2A-203ENST00000577706 NKX2-3Q8TAU0 364 aa9.61□□□□□ -0.87
TOP2A-203ENST00000577706 NPDC1Q9NQX5 325 aaPredicted RBP9.61□□□□□ -0.87
TOP2A-203ENST00000577706 GGCXP38435 758 aa9.6□□□□□ -0.87
TOP2A-203ENST00000577706 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
TOP2A-203ENST00000577706 COPS2P61201 443 aa9.6□□□□□ -0.87
TOP2A-203ENST00000577706 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
TOP2A-203ENST00000577706 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
TOP2A-203ENST00000577706 EYA1Q99502 592 aa9.57□□□□□ -0.88
TOP2A-203ENST00000577706 TMUB1Q9BVT8 246 aa9.56□□□□□ -0.88
TOP2A-203ENST00000577706 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
TOP2A-203ENST00000577706 ZPR1O75312 459 aa9.55□□□□□ -0.88
TOP2A-203ENST00000577706 PRR14Q9BWN1 585 aa9.55□□□□□ -0.88
TOP2A-203ENST00000577706 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms