RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 OS9Q13438 667 aaPredicted RBP7.25□□□□□ -1.25
BRIP1-202ENST00000577598 GSE1Q14687 1217 aa7.25□□□□□ -1.25
BRIP1-202ENST00000577598 STAG3Q9UJ98 1225 aa7.25□□□□□ -1.25
BRIP1-202ENST00000577598 CCDC85CA6NKD9 419 aa7.24□□□□□ -1.25
BRIP1-202ENST00000577598 CLSTN1O94985 981 aa7.24□□□□□ -1.25
BRIP1-202ENST00000577598 MICAL1Q8TDZ2 1067 aa7.24□□□□□ -1.25
BRIP1-202ENST00000577598 BCL2L13Q9BXK5 485 aa7.24□□□□□ -1.25
BRIP1-202ENST00000577598 ZNF467Q7Z7K2 595 aaPredicted RBP7.24□□□□□ -1.25
BRIP1-202ENST00000577598 ANO2Q9NQ90 1003 aa7.24□□□□□ -1.25
BRIP1-202ENST00000577598 TICAM2Q86XR7 235 aa7.23□□□□□ -1.25
BRIP1-202ENST00000577598 PMFBP1Q8TBY8 1022 aa7.23□□□□□ -1.25
BRIP1-202ENST00000577598 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
BRIP1-202ENST00000577598 DNAJC5BQ9UF47 199 aa7.23□□□□□ -1.25
BRIP1-202ENST00000577598 MDM2Q00987 491 aaPredicted RBP7.23□□□□□ -1.25
BRIP1-202ENST00000577598 LMOD1P29536 600 aaPredicted RBP7.22□□□□□ -1.25
BRIP1-202ENST00000577598 PTMSP20962 102 aa7.22□□□□□ -1.25
BRIP1-202ENST00000577598 GIMAP6Q6P9H5 292 aa7.22□□□□□ -1.25
BRIP1-202ENST00000577598 PLSCR2Q9NRY7 297 aa7.22□□□□□ -1.25
BRIP1-202ENST00000577598 KLHL42Q9P2K6 505 aa7.22□□□□□ -1.25
BRIP1-202ENST00000577598 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.25
BRIP1-202ENST00000577598 UPF1Q92900 1129 aaKnown RBP eCLIP7.21□□□□□ -1.25
BRIP1-202ENST00000577598 GABBR1Q9UBS5 961 aa7.21□□□□□ -1.25
BRIP1-202ENST00000577598 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.25
BRIP1-202ENST00000577598 MS4A1P11836 297 aa7.21□□□□□ -1.26
BRIP1-202ENST00000577598 RAB11FIP3O75154 756 aa7.21□□□□□ -1.26
BRIP1-202ENST00000577598 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
BRIP1-202ENST00000577598 MSH5O43196 834 aa7.2□□□□□ -1.26
BRIP1-202ENST00000577598 DDX12PQ92771 950 aa7.2□□□□□ -1.26
BRIP1-202ENST00000577598 KIAA1522Q9P206 1035 aaPredicted RBP7.2□□□□□ -1.26
BRIP1-202ENST00000577598 BCCIPQ9P287 314 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRIP1-202ENST00000577598 CABP2Q9NPB3 220 aa7.2□□□□□ -1.26
BRIP1-202ENST00000577598 RASEFQ8IZ41 740 aa7.19□□□□□ -1.26
BRIP1-202ENST00000577598 ABL1P00519 1130 aa7.19□□□□□ -1.26
BRIP1-202ENST00000577598 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
BRIP1-202ENST00000577598 CNPY4Q8N129 248 aa7.19□□□□□ -1.26
BRIP1-202ENST00000577598 ANKRD13AQ8IZ07 590 aa7.18□□□□□ -1.26
BRIP1-202ENST00000577598 TCF3P15923 654 aa7.18□□□□□ -1.26
BRIP1-202ENST00000577598 PHF8Q9UPP1 1060 aa7.18□□□□□ -1.26
BRIP1-202ENST00000577598 SERPINB4P48594 390 aa7.18□□□□□ -1.26
BRIP1-202ENST00000577598 GORABQ5T7V8 394 aa7.18□□□□□ -1.26
BRIP1-202ENST00000577598 REPIN1Q9BWE0 567 aaKnown RBP7.18□□□□□ -1.26
BRIP1-202ENST00000577598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.17□□□□□ -1.268e-7■■□□□ 13.2
BRIP1-202ENST00000577598 A6NJR5 290 aa7.17□□□□□ -1.26
BRIP1-202ENST00000577598 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
BRIP1-202ENST00000577598 HDGFL1Q5TGJ6 251 aa7.17□□□□□ -1.26
BRIP1-202ENST00000577598 PLCD4Q9BRC7 762 aa7.17□□□□□ -1.26
BRIP1-202ENST00000577598 FAM161BQ96MY7 647 aa7.17□□□□□ -1.26
BRIP1-202ENST00000577598 DNAJA1P31689 397 aaKnown RBP7.16□□□□□ -1.26
BRIP1-202ENST00000577598 DDX27Q96GQ7 796 aaKnown RBP7.16□□□□□ -1.26
BRIP1-202ENST00000577598 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
BRIP1-202ENST00000577598 EXOC8Q8IYI6 725 aa7.16□□□□□ -1.26
BRIP1-202ENST00000577598 BEGAINQ9BUH8 593 aa7.15□□□□□ -1.26
BRIP1-202ENST00000577598 ENOX2Q16206 610 aaKnown RBP7.15□□□□□ -1.26
BRIP1-202ENST00000577598 DHX38Q92620 1227 aaKnown RBP7.15□□□□□ -1.26
BRIP1-202ENST00000577598 MFRPQ9BY79 579 aa7.15□□□□□ -1.26
BRIP1-202ENST00000577598 MYH16Q9H6N6 1097 aa7.15□□□□□ -1.26
BRIP1-202ENST00000577598 TANGO6Q9C0B7 1094 aa7.15□□□□□ -1.27
BRIP1-202ENST00000577598 SND1Q7KZF4 910 aaKnown RBP eCLIP7.14□□□□□ -1.27
BRIP1-202ENST00000577598 LMOD3Q0VAK6 560 aa7.13□□□□□ -1.27
BRIP1-202ENST00000577598 NAALADL2Q58DX5 795 aa7.13□□□□□ -1.27
BRIP1-202ENST00000577598 AP1G2O75843 785 aa7.13□□□□□ -1.27
BRIP1-202ENST00000577598 VAC14Q08AM6 782 aa7.13□□□□□ -1.27
BRIP1-202ENST00000577598 MAP4K4O95819 1239 aaPredicted RBP7.13□□□□□ -1.27
BRIP1-202ENST00000577598 WWC1Q8IX03 1113 aa7.12□□□□□ -1.27
BRIP1-202ENST00000577598 EFCAB3Q8N7B9 438 aa7.12□□□□□ -1.27
BRIP1-202ENST00000577598 DRC1Q96MC2 740 aa7.12□□□□□ -1.27
BRIP1-202ENST00000577598 ZNF326Q5BKZ1 582 aaKnown RBP7.12□□□□□ -1.27
BRIP1-202ENST00000577598 AXDND1Q5T1B0 1012 aaPredicted RBP7.12□□□□□ -1.27
BRIP1-202ENST00000577598 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
BRIP1-202ENST00000577598 HIRIP3Q9BW71 556 aaPredicted RBP7.12□□□□□ -1.27
BRIP1-202ENST00000577598 ANAPC15P60006 121 aa7.11□□□□□ -1.27
BRIP1-202ENST00000577598 PPME1Q9Y570 386 aa7.11□□□□□ -1.27
BRIP1-202ENST00000577598 WDR75Q8IWA0 830 aaKnown RBP7.11□□□□□ -1.27
BRIP1-202ENST00000577598 SREK1Q8WXA9 508 aaKnown RBP7.11□□□□□ -1.27
BRIP1-202ENST00000577598 SPATA32Q96LK8 384 aa7.11□□□□□ -1.27
BRIP1-202ENST00000577598 NCKAP5LQ9HCH0 1330 aa7.11□□□□□ -1.27
BRIP1-202ENST00000577598 LOC102724159A0A0B4J2E5 919 aa7.1□□□□□ -1.27
BRIP1-202ENST00000577598 MTMR3Q13615 1198 aa7.1□□□□□ -1.27
BRIP1-202ENST00000577598 PWP2Q15269 919 aaKnown RBP7.1□□□□□ -1.27
BRIP1-202ENST00000577598 SIRT1Q96EB6 747 aa7.1□□□□□ -1.27
BRIP1-202ENST00000577598 VRTNQ9H8Y1 702 aa7.1□□□□□ -1.27
BRIP1-202ENST00000577598 FGD1P98174 961 aa7.1□□□□□ -1.27
BRIP1-202ENST00000577598 ZNF16P17020 682 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-202ENST00000577598 APBB1IPQ7Z5R6 666 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-202ENST00000577598 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-202ENST00000577598 BMS1Q14692 1282 aaKnown RBP7.09□□□□□ -1.27
BRIP1-202ENST00000577598 SLFNL1Q499Z3 407 aa7.09□□□□□ -1.27
BRIP1-202ENST00000577598 TPD52L2O43399 206 aaKnown RBP7.09□□□□□ -1.28
BRIP1-202ENST00000577598 NUBP1P53384 320 aa7.09□□□□□ -1.28
BRIP1-202ENST00000577598 IRF6O14896 467 aa7.08□□□□□ -1.28
BRIP1-202ENST00000577598 DPH6Q7L8W6 267 aa7.08□□□□□ -1.28
BRIP1-202ENST00000577598 PBXIP1Q96AQ6 731 aa7.08□□□□□ -1.28
BRIP1-202ENST00000577598 ZSWIM4Q9H7M6 989 aa7.08□□□□□ -1.28
BRIP1-202ENST00000577598 GAS2L2Q8NHY3 880 aa7.08□□□□□ -1.28
BRIP1-202ENST00000577598 hCG_2014768A0A024R1R8 64 aa7.07□□□□□ -1.28
BRIP1-202ENST00000577598 PNMA2Q9UL42 364 aa7.07□□□□□ -1.28
BRIP1-202ENST00000577598 MKNK1Q9BUB5 465 aa7.06□□□□□ -1.28
BRIP1-202ENST00000577598 SH3BP5O60239 455 aa7.06□□□□□ -1.28
BRIP1-202ENST00000577598 ZNF211Q13398 564 aaPredicted RBP7.06□□□□□ -1.28
BRIP1-202ENST00000577598 GPATCH11Q8N954 259 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms