RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 SPDYE16A6NNV3 312 aaPredicted RBP7.67□□□□□ -1.18
CDH8-204ENST00000577536 EPAS1Q99814 870 aa7.67□□□□□ -1.18
CDH8-204ENST00000577536 ZBED2Q9BTP6 218 aa7.67□□□□□ -1.18
CDH8-204ENST00000577536 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
CDH8-204ENST00000577536 STAC3Q96MF2 364 aa7.66□□□□□ -1.18
CDH8-204ENST00000577536 PPP1R3GB7ZBB8 358 aa7.65□□□□□ -1.18
CDH8-204ENST00000577536 PTPN5P54829 565 aa7.65□□□□□ -1.18
CDH8-204ENST00000577536 DDX12PQ92771 950 aa7.65□□□□□ -1.18
CDH8-204ENST00000577536 BHMG1C9JSJ3 638 aaPredicted RBP7.63□□□□□ -1.19
CDH8-204ENST00000577536 COL9A1P20849 921 aa7.63□□□□□ -1.19
CDH8-204ENST00000577536 C6orf132Q5T0Z8 1188 aa7.62□□□□□ -1.19
CDH8-204ENST00000577536 RBM33Q96EV2 1170 aaKnown RBP7.62□□□□□ -1.19
CDH8-204ENST00000577536 NBR1Q14596 966 aa7.61□□□□□ -1.19
CDH8-204ENST00000577536 EN1Q05925 392 aaPredicted RBP7.6□□□□□ -1.19
CDH8-204ENST00000577536 PROX2Q3B8N5 592 aa7.6□□□□□ -1.19
CDH8-204ENST00000577536 PLCB2Q00722 1185 aa7.59□□□□□ -1.19
CDH8-204ENST00000577536 Q6ZNB5 142 aa7.59□□□□□ -1.19
CDH8-204ENST00000577536 MRPL50Q8N5N7 158 aaKnown RBP7.59□□□□□ -1.19
CDH8-204ENST00000577536 NBPF3Q9H094 633 aa7.59□□□□□ -1.19
CDH8-204ENST00000577536 RABGEF1Q9UJ41 708 aa7.59□□□□□ -1.19
CDH8-204ENST00000577536 A0A0G2JS52 829 aa7.58□□□□□ -1.2
CDH8-204ENST00000577536 RGS20O76081 388 aa7.58□□□□□ -1.2
CDH8-204ENST00000577536 GRXCR2A6NFK2 248 aa7.57□□□□□ -1.2
CDH8-204ENST00000577536 MAP3K7O43318 606 aa7.57□□□□□ -1.2
CDH8-204ENST00000577536 GOLGA8CPA6NN73 597 aa7.56□□□□□ -1.2
CDH8-204ENST00000577536 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
CDH8-204ENST00000577536 TSR1Q2NL82 804 aaKnown RBP7.56□□□□□ -1.2
CDH8-204ENST00000577536 KCNV2Q8TDN2 545 aa7.56□□□□□ -1.2
CDH8-204ENST00000577536 ARHGEF1Q92888 912 aaKnown RBP7.56□□□□□ -1.2
CDH8-204ENST00000577536 PRIM1P49642 420 aaKnown RBP7.55□□□□□ -1.2
CDH8-204ENST00000577536 WNT2BQ93097 391 aa7.55□□□□□ -1.2
CDH8-204ENST00000577536 TRIM6-TRIM34B2RNG4 842 aa7.54□□□□□ -1.2
CDH8-204ENST00000577536 OSBPP22059 807 aa7.54□□□□□ -1.2
CDH8-204ENST00000577536 KIAA1468Q9P260 1216 aa7.54□□□□□ -1.2
CDH8-204ENST00000577536 THSD4Q6ZMP0 1018 aa7.53□□□□□ -1.2
CDH8-204ENST00000577536 LAPTM4BQ86VI4 370 aa7.52□□□□□ -1.21
CDH8-204ENST00000577536 P3H3Q8IVL6 736 aa7.51□□□□□ -1.21
CDH8-204ENST00000577536 CERKQ8TCT0 537 aa7.51□□□□□ -1.21
CDH8-204ENST00000577536 TSKSQ9UJT2 592 aa7.51□□□□□ -1.21
CDH8-204ENST00000577536 IFFO2Q5TF58 517 aa7.5□□□□□ -1.21
CDH8-204ENST00000577536 ANKK1Q8NFD2 765 aa7.5□□□□□ -1.21
CDH8-204ENST00000577536 SEPT9Q9UHD8 586 aaPredicted RBP7.5□□□□□ -1.21
CDH8-204ENST00000577536 MLLT3P42568 568 aaPredicted RBP7.49□□□□□ -1.21
CDH8-204ENST00000577536 PRSS12P56730 875 aa7.49□□□□□ -1.21
CDH8-204ENST00000577536 PACS2Q86VP3 889 aa7.49□□□□□ -1.21
CDH8-204ENST00000577536 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
CDH8-204ENST00000577536 ZFRQ96KR1 1074 aaKnown RBP7.49□□□□□ -1.21
CDH8-204ENST00000577536 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
CDH8-204ENST00000577536 FAM98CQ17RN3 349 aaKnown RBP7.48□□□□□ -1.21
CDH8-204ENST00000577536 HAP1P54257 671 aaPredicted RBP7.47□□□□□ -1.21
CDH8-204ENST00000577536 SOWAHBA6NEL2 793 aa7.46□□□□□ -1.22
CDH8-204ENST00000577536 BCAMP50895 628 aa7.46□□□□□ -1.22
CDH8-204ENST00000577536 FAM198AQ9UFP1 575 aa7.46□□□□□ -1.22
CDH8-204ENST00000577536 RBM27Q9P2N5 1060 aaKnown RBP7.45□□□□□ -1.22
CDH8-204ENST00000577536 NPDC1Q9NQX5 325 aaPredicted RBP7.44□□□□□ -1.22
CDH8-204ENST00000577536 NBPF26B4DH59 902 aa7.43□□□□□ -1.22
CDH8-204ENST00000577536 TATDN2Q93075 761 aa7.43□□□□□ -1.22
CDH8-204ENST00000577536 C3orf80F5H4A9 247 aa7.42□□□□□ -1.22
CDH8-204ENST00000577536 SMAPO00193 183 aa7.42□□□□□ -1.22
CDH8-204ENST00000577536 SEMA3EO15041 775 aa7.42□□□□□ -1.22
CDH8-204ENST00000577536 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
CDH8-204ENST00000577536 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.42□□□□□ -1.22
CDH8-204ENST00000577536 PNMA3Q9UL41 463 aa7.42□□□□□ -1.22
CDH8-204ENST00000577536 LCE2BO14633 110 aa7.41□□□□□ -1.22
CDH8-204ENST00000577536 PADI6Q6TGC4 694 aa7.41□□□□□ -1.22
CDH8-204ENST00000577536 TTC13Q8NBP0 860 aa7.41□□□□□ -1.22
CDH8-204ENST00000577536 NYAP1Q6ZVC0 841 aa7.4□□□□□ -1.22
CDH8-204ENST00000577536 NUDT18Q6ZVK8 323 aa7.4□□□□□ -1.22
CDH8-204ENST00000577536 WBP1LQ9NX94 342 aa7.4□□□□□ -1.22
CDH8-204ENST00000577536 TSR3Q9UJK0 312 aaKnown RBP7.4□□□□□ -1.22
CDH8-204ENST00000577536 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.22
CDH8-204ENST00000577536 KDM2AQ9Y2K7 1162 aa7.4□□□□□ -1.22
CDH8-204ENST00000577536 PTGDRQ13258 359 aa7.39□□□□□ -1.23
CDH8-204ENST00000577536 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
CDH8-204ENST00000577536 NUTM2FA1L443 756 aa7.37□□□□□ -1.23
CDH8-204ENST00000577536 TESPA1A2RU30 521 aaPredicted RBP7.37□□□□□ -1.23
CDH8-204ENST00000577536 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
CDH8-204ENST00000577536 PPP4CP60510 307 aa7.35□□□□□ -1.23
CDH8-204ENST00000577536 TRAF7Q6Q0C0 670 aa7.35□□□□□ -1.23
CDH8-204ENST00000577536 HDGFP51858 240 aaKnown RBP7.34□□□□□ -1.23
CDH8-204ENST00000577536 SMYD5Q6GMV2 418 aa7.34□□□□□ -1.23
CDH8-204ENST00000577536 VSIG10Q8N0Z9 540 aa7.34□□□□□ -1.23
CDH8-204ENST00000577536 EYA1Q99502 592 aa7.34□□□□□ -1.23
CDH8-204ENST00000577536 FCHSD2O94868 740 aa7.33□□□□□ -1.24
CDH8-204ENST00000577536 GFRA3O60609 400 aa7.32□□□□□ -1.24
CDH8-204ENST00000577536 RNF40O75150 1001 aa7.32□□□□□ -1.24
CDH8-204ENST00000577536 SWT1Q5T5J6 900 aaKnown RBP7.32□□□□□ -1.24
CDH8-204ENST00000577536 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
CDH8-204ENST00000577536 ADGRG1Q9Y653 693 aa7.31□□□□□ -1.24
CDH8-204ENST00000577536 KCNC4Q03721 635 aa7.3□□□□□ -1.24
CDH8-204ENST00000577536 LAPTM4AQ15012 233 aa7.3□□□□□ -1.24
CDH8-204ENST00000577536 SLF2Q8IX21 1173 aa7.3□□□□□ -1.24
CDH8-204ENST00000577536 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
CDH8-204ENST00000577536 HIC1Q14526 733 aa7.29□□□□□ -1.24
CDH8-204ENST00000577536 FAM161AQ3B820 660 aa7.29□□□□□ -1.24
CDH8-204ENST00000577536 DNAJB2P25686 324 aa7.28□□□□□ -1.24
CDH8-204ENST00000577536 SLC4A3P48751 1232 aa7.28□□□□□ -1.24
CDH8-204ENST00000577536 APLP1P51693 650 aa7.28□□□□□ -1.24
CDH8-204ENST00000577536 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
CDH8-204ENST00000577536 RCCD1A6NED2 376 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms