RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 RGL3Q3MIN7 710 aa10.94□□□□□ -0.66
CDH8-203ENST00000577390 CCDC70Q6NSX1 233 aa10.94□□□□□ -0.66
CDH8-203ENST00000577390 PAXIP1Q6ZW49 1069 aaPredicted RBP10.93□□□□□ -0.66
CDH8-203ENST00000577390 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
CDH8-203ENST00000577390 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
CDH8-203ENST00000577390 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
CDH8-203ENST00000577390 CLIP1P30622 1438 aa10.93□□□□□ -0.66
CDH8-203ENST00000577390 TMEM87AQ8NBN3 555 aa10.93□□□□□ -0.66
CDH8-203ENST00000577390 CCDC66A2RUB6 948 aa10.92□□□□□ -0.66
CDH8-203ENST00000577390 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
CDH8-203ENST00000577390 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
CDH8-203ENST00000577390 CBX1P83916 185 aa10.92□□□□□ -0.66
CDH8-203ENST00000577390 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
CDH8-203ENST00000577390 BRD2P25440 801 aaKnown RBP10.92□□□□□ -0.66
CDH8-203ENST00000577390 HOMER1Q86YM7 354 aa10.92□□□□□ -0.66
CDH8-203ENST00000577390 PLCD3Q8N3E9 789 aa10.91□□□□□ -0.66
CDH8-203ENST00000577390 HMMRO75330 724 aa10.91□□□□□ -0.66
CDH8-203ENST00000577390 AAMPQ13685 434 aa10.91□□□□□ -0.66
CDH8-203ENST00000577390 GPATCH3Q96I76 525 aa10.91□□□□□ -0.66
CDH8-203ENST00000577390 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
CDH8-203ENST00000577390 AKAP17AQ02040 695 aaKnown RBP10.9□□□□□ -0.66
CDH8-203ENST00000577390 GBP4Q96PP9 640 aa10.9□□□□□ -0.66
CDH8-203ENST00000577390 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
CDH8-203ENST00000577390 PDE4AP27815 886 aa10.89□□□□□ -0.67
CDH8-203ENST00000577390 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
CDH8-203ENST00000577390 HOMEZQ8IX15 550 aa10.89□□□□□ -0.67
CDH8-203ENST00000577390 FOXD1Q16676 465 aa10.89□□□□□ -0.67
CDH8-203ENST00000577390 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
CDH8-203ENST00000577390 VPS37DQ86XT2 251 aa10.88□□□□□ -0.67
CDH8-203ENST00000577390 HMGN5P82970 282 aaKnown RBP10.88□□□□□ -0.67
CDH8-203ENST00000577390 EVA1CP58658 441 aa10.88□□□□□ -0.67
CDH8-203ENST00000577390 IRX3P78415 501 aaPredicted RBP10.87□□□□□ -0.67
CDH8-203ENST00000577390 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
CDH8-203ENST00000577390 WASHC2AQ641Q2 1341 aa10.87□□□□□ -0.67
CDH8-203ENST00000577390 TSPYL1Q9H0U9 437 aa10.87□□□□□ -0.67
CDH8-203ENST00000577390 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
CDH8-203ENST00000577390 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CDH8-203ENST00000577390 BCCIPQ9P287 314 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDH8-203ENST00000577390 TPM1P09493 284 aa10.86□□□□□ -0.67
CDH8-203ENST00000577390 NAP1L1P55209 391 aaKnown RBP10.86□□□□□ -0.67
CDH8-203ENST00000577390 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
CDH8-203ENST00000577390 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
CDH8-203ENST00000577390 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
CDH8-203ENST00000577390 ZRSR2Q15696 482 aaKnown RBP10.85□□□□□ -0.67
CDH8-203ENST00000577390 MRE11P49959 708 aa10.85□□□□□ -0.67
CDH8-203ENST00000577390 RDXP35241 583 aaKnown RBP10.85□□□□□ -0.67
CDH8-203ENST00000577390 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
CDH8-203ENST00000577390 HDGFP51858 240 aaKnown RBP10.85□□□□□ -0.67
CDH8-203ENST00000577390 EPS15P42566 896 aa10.85□□□□□ -0.67
CDH8-203ENST00000577390 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
CDH8-203ENST00000577390 SYTL4Q96C24 671 aaPredicted RBP10.84□□□□□ -0.67
CDH8-203ENST00000577390 SF3B2Q13435 895 aaKnown RBP10.84□□□□□ -0.67
CDH8-203ENST00000577390 PLCD4Q9BRC7 762 aa10.84□□□□□ -0.67
CDH8-203ENST00000577390 SAFB2Q14151 953 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDH8-203ENST00000577390 ANKRD62A6NC57 917 aa10.83□□□□□ -0.68
CDH8-203ENST00000577390 WASHC2CQ9Y4E1 1318 aa10.83□□□□□ -0.68
CDH8-203ENST00000577390 IKQ13123 557 aaPredicted RBP10.83□□□□□ -0.68
CDH8-203ENST00000577390 ESPNB1AK53 854 aa10.83□□□□□ -0.68
CDH8-203ENST00000577390 CDCA8Q53HL2 280 aa10.83□□□□□ -0.68
CDH8-203ENST00000577390 IPO7O95373 1038 aaKnown RBP10.82□□□□□ -0.68
CDH8-203ENST00000577390 MYCNP04198 464 aaPredicted RBP10.82□□□□□ -0.68
CDH8-203ENST00000577390 SYAP1Q96A49 352 aaPredicted RBP10.82□□□□□ -0.68
CDH8-203ENST00000577390 NEFHP12036 1026 aa10.81□□□□□ -0.68
CDH8-203ENST00000577390 IPO4Q8TEX9 1081 aaKnown RBP10.81□□□□□ -0.68
CDH8-203ENST00000577390 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
CDH8-203ENST00000577390 NEBLO76041 1014 aa10.81□□□□□ -0.68
CDH8-203ENST00000577390 GRIPAP1Q4V328 841 aa10.8□□□□□ -0.68
CDH8-203ENST00000577390 CLCN1P35523 988 aa10.8□□□□□ -0.68
CDH8-203ENST00000577390 RUFY1Q96T51 708 aa10.8□□□□□ -0.68
CDH8-203ENST00000577390 NOL8Q76FK4 1167 aaKnown RBP10.79□□□□□ -0.68
CDH8-203ENST00000577390 SMAP1Q8IYB5 467 aaPredicted RBP10.79□□□□□ -0.68
CDH8-203ENST00000577390 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
CDH8-203ENST00000577390 H3BQV1 296 aa10.79□□□□□ -0.68
CDH8-203ENST00000577390 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
CDH8-203ENST00000577390 GPS2Q13227 327 aa10.79□□□□□ -0.68
CDH8-203ENST00000577390 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
CDH8-203ENST00000577390 SKIDA1Q1XH10 827 aa10.78□□□□□ -0.68
CDH8-203ENST00000577390 AXDND1Q5T1B0 1012 aaPredicted RBP10.78□□□□□ -0.68
CDH8-203ENST00000577390 NOM1Q5C9Z4 860 aaKnown RBP10.78□□□□□ -0.68
CDH8-203ENST00000577390 SYNE3Q6ZMZ3 975 aa10.78□□□□□ -0.68
CDH8-203ENST00000577390 LETM1O95202 739 aaPredicted RBP10.78□□□□□ -0.68
CDH8-203ENST00000577390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.77□□□□□ -0.68
CDH8-203ENST00000577390 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.68
CDH8-203ENST00000577390 FAM161AQ3B820 660 aa10.77□□□□□ -0.68
CDH8-203ENST00000577390 RBM33Q96EV2 1170 aaKnown RBP10.77□□□□□ -0.68
CDH8-203ENST00000577390 CCDC47Q96A33 483 aaKnown RBP10.77□□□□□ -0.69
CDH8-203ENST00000577390 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
CDH8-203ENST00000577390 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.69
CDH8-203ENST00000577390 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
CDH8-203ENST00000577390 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
CDH8-203ENST00000577390 UQCRHP07919 91 aa10.76□□□□□ -0.69
CDH8-203ENST00000577390 CA8P35219 290 aa10.76□□□□□ -0.69
CDH8-203ENST00000577390 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
CDH8-203ENST00000577390 CDR1P51861 262 aa10.75□□□□□ -0.69
CDH8-203ENST00000577390 PSMD1Q99460 953 aa10.75□□□□□ -0.69
CDH8-203ENST00000577390 HSP90AB4PQ58FF6 505 aa10.75□□□□□ -0.69
CDH8-203ENST00000577390 ANKRD20A12PQ8NF67 263 aa10.75□□□□□ -0.69
CDH8-203ENST00000577390 SPAG9O60271 1321 aaKnown RBP10.75□□□□□ -0.69
CDH8-203ENST00000577390 CCDC173Q0VFZ6 552 aa10.75□□□□□ -0.69
CDH8-203ENST00000577390 NASPP49321 788 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms