RNA–Protein interactions for RNA: ENST00000576024.1

TP53-216, Transcript of tumor protein p53, humanhuman

TSL 1 (best)

Gene TP53, Length 175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-216ENST00000576024 POTEMA6NI47 508 aa6.42□□□□□ -1.38
TP53-216ENST00000576024 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
TP53-216ENST00000576024 RBM26Q5T8P6 1007 aaKnown RBP6.42□□□□□ -1.38
TP53-216ENST00000576024 PPP1R3GB7ZBB8 358 aa6.41□□□□□ -1.38
TP53-216ENST00000576024 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
TP53-216ENST00000576024 KCNK17Q96T54 332 aa6.41□□□□□ -1.38
TP53-216ENST00000576024 FCHSD2O94868 740 aa6.4□□□□□ -1.38
TP53-216ENST00000576024 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.38
TP53-216ENST00000576024 POTEB3A0JP26 581 aa6.39□□□□□ -1.39
TP53-216ENST00000576024 PRIM1P49642 420 aaKnown RBP6.39□□□□□ -1.39
TP53-216ENST00000576024 POTEBQ6S5H4 581 aa6.39□□□□□ -1.39
TP53-216ENST00000576024 PTGDRQ13258 359 aa6.38□□□□□ -1.39
TP53-216ENST00000576024 HIC1Q14526 733 aa6.38□□□□□ -1.39
TP53-216ENST00000576024 RBM27Q9P2N5 1060 aaKnown RBP6.38□□□□□ -1.39
TP53-216ENST00000576024 CDHR5Q9HBB8 845 aa6.37□□□□□ -1.39
TP53-216ENST00000576024 PSEN2P49810 448 aa6.36□□□□□ -1.39
TP53-216ENST00000576024 LSM11P83369 360 aaKnown RBP eCLIP6.36□□□□□ -1.39
TP53-216ENST00000576024 CDAN1Q8IWY9 1227 aa6.36□□□□□ -1.39
TP53-216ENST00000576024 SLC4A5Q9BY07 1137 aa6.36□□□□□ -1.39
TP53-216ENST00000576024 PCDH10Q9P2E7 1040 aa6.36□□□□□ -1.39
TP53-216ENST00000576024 AXIN2Q9Y2T1 843 aa6.36□□□□□ -1.39
TP53-216ENST00000576024 TK2O00142 265 aa6.35□□□□□ -1.39
TP53-216ENST00000576024 GNPATO15228 680 aa6.35□□□□□ -1.39
TP53-216ENST00000576024 COL9A1P20849 921 aa6.35□□□□□ -1.39
TP53-216ENST00000576024 PRSS12P56730 875 aa6.35□□□□□ -1.39
TP53-216ENST00000576024 POTEEQ6S8J3 1075 aa6.35□□□□□ -1.39
TP53-216ENST00000576024 GPR37O15354 613 aa6.34□□□□□ -1.39
TP53-216ENST00000576024 ONECUT3O60422 494 aaPredicted RBP6.34□□□□□ -1.39
TP53-216ENST00000576024 ZC3H15Q8WU90 426 aaKnown RBP6.34□□□□□ -1.39
TP53-216ENST00000576024 CDCA7LQ96GN5 454 aa6.34□□□□□ -1.39
TP53-216ENST00000576024 ZBED2Q9BTP6 218 aa6.34□□□□□ -1.39
TP53-216ENST00000576024 NPDC1Q9NQX5 325 aaPredicted RBP6.34□□□□□ -1.39
TP53-216ENST00000576024 TRIM6-TRIM34B2RNG4 842 aa6.33□□□□□ -1.4
TP53-216ENST00000576024 DMRTA1Q5VZB9 504 aa6.33□□□□□ -1.4
TP53-216ENST00000576024 PACS2Q86VP3 889 aa6.33□□□□□ -1.4
TP53-216ENST00000576024 NBPF26B4DH59 902 aa6.32□□□□□ -1.4
TP53-216ENST00000576024 PADI6Q6TGC4 694 aa6.32□□□□□ -1.4
TP53-216ENST00000576024 NBPF3Q9H094 633 aa6.32□□□□□ -1.4
TP53-216ENST00000576024 ZMYND10O75800 440 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 MAP2K5Q13163 448 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 PROX2Q3B8N5 592 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 ADGRD1Q6QNK2 874 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 ANKRD13DQ6ZTN6 518 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 RABGEF1Q9UJ41 708 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 VPS9D1Q9Y2B5 631 aa6.31□□□□□ -1.4
TP53-216ENST00000576024 BARGINQ6ZT62 677 aa6.3□□□□□ -1.4
TP53-216ENST00000576024 TTC13Q8NBP0 860 aa6.3□□□□□ -1.4
TP53-216ENST00000576024 STAC3Q96MF2 364 aa6.3□□□□□ -1.4
TP53-216ENST00000576024 MINK1Q8N4C8 1332 aaPredicted RBP6.29□□□□□ -1.4
TP53-216ENST00000576024 OATP04181 439 aa6.29□□□□□ -1.4
TP53-216ENST00000576024 TPRNQ4KMQ1 711 aa6.29□□□□□ -1.4
TP53-216ENST00000576024 KRI1Q8N9T8 703 aaKnown RBP6.29□□□□□ -1.4
TP53-216ENST00000576024 KIAA1468Q9P260 1216 aa6.29□□□□□ -1.4
TP53-216ENST00000576024 TSKSQ9UJT2 592 aa6.29□□□□□ -1.4
TP53-216ENST00000576024 RBM46Q8TBY0 533 aaKnown RBP6.28□□□□□ -1.4
TP53-216ENST00000576024 LAPTM4BQ86VI4 370 aa6.27□□□□□ -1.41
TP53-216ENST00000576024 MRPL50Q8N5N7 158 aaKnown RBP6.27□□□□□ -1.41
TP53-216ENST00000576024 TATDN2Q93075 761 aa6.27□□□□□ -1.41
TP53-216ENST00000576024 PNMA3Q9UL41 463 aa6.27□□□□□ -1.41
TP53-216ENST00000576024 IRF6O14896 467 aa6.26□□□□□ -1.41
TP53-216ENST00000576024 HRO43593 1189 aa6.26□□□□□ -1.41
TP53-216ENST00000576024 FECHP22830 423 aa6.26□□□□□ -1.41
TP53-216ENST00000576024 NUDT18Q6ZVK8 323 aa6.26□□□□□ -1.41
TP53-216ENST00000576024 FAM198AQ9UFP1 575 aa6.26□□□□□ -1.41
TP53-216ENST00000576024 ADGRG1Q9Y653 693 aa6.26□□□□□ -1.41
TP53-216ENST00000576024 GOLGA8CPA6NN73 597 aa6.25□□□□□ -1.41
TP53-216ENST00000576024 BHMG1C9JSJ3 638 aaPredicted RBP6.25□□□□□ -1.41
TP53-216ENST00000576024 FAM98CQ17RN3 349 aaKnown RBP6.25□□□□□ -1.41
TP53-216ENST00000576024 CCDC102AQ96A19 550 aa6.25□□□□□ -1.41
TP53-216ENST00000576024 AK7Q96M32 723 aa6.25□□□□□ -1.41
TP53-216ENST00000576024 METTL3Q86U44 580 aaKnown RBP6.24□□□□□ -1.41
TP53-216ENST00000576024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.23□□□□□ -1.41
TP53-216ENST00000576024 DNAJB2P25686 324 aa6.23□□□□□ -1.41
TP53-216ENST00000576024 SLC4A3P48751 1232 aa6.23□□□□□ -1.41
TP53-216ENST00000576024 HDGFP51858 240 aaKnown RBP6.23□□□□□ -1.41
TP53-216ENST00000576024 PXYLP1Q8TE99 480 aa6.23□□□□□ -1.41
TP53-216ENST00000576024 EYA1Q99502 592 aa6.23□□□□□ -1.41
TP53-216ENST00000576024 SEPT9Q9UHD8 586 aaPredicted RBP6.23□□□□□ -1.41
TP53-216ENST00000576024 SMAPO00193 183 aa6.22□□□□□ -1.41
TP53-216ENST00000576024 SLC24A3Q9HC58 644 aa6.22□□□□□ -1.41
TP53-216ENST00000576024 FAM161AQ3B820 660 aa6.21□□□□□ -1.42
TP53-216ENST00000576024 ANKK1Q8NFD2 765 aa6.21□□□□□ -1.42
TP53-216ENST00000576024 ZFRQ96KR1 1074 aaKnown RBP6.21□□□□□ -1.42
TP53-216ENST00000576024 RCCD1A6NED2 376 aa6.2□□□□□ -1.42
TP53-216ENST00000576024 NECTIN2Q92692 538 aa6.2□□□□□ -1.42
TP53-216ENST00000576024 MYT1LQ9UL68 1186 aa6.2□□□□□ -1.42
TP53-216ENST00000576024 C3orf80F5H4A9 247 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 TRIM66O15016 1216 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 CLCN1P35523 988 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 AMHR2Q16671 573 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 WNT2BQ93097 391 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 LRCH3Q96II8 777 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 TMEM134Q9H6X4 195 aa6.19□□□□□ -1.42
TP53-216ENST00000576024 TTLL12Q14166 644 aaPredicted RBP6.18□□□□□ -1.42
TP53-216ENST00000576024 SPNS2Q8IVW8 549 aa6.18□□□□□ -1.42
TP53-216ENST00000576024 SLF2Q8IX21 1173 aa6.18□□□□□ -1.42
TP53-216ENST00000576024 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.18□□□□□ -1.42
TP53-216ENST00000576024 PRKCSHP14314 528 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms