RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
ERCC4-206ENST00000574781 SPAG9O60271 1321 aaKnown RBP12.86□□□□□ -0.35
ERCC4-206ENST00000574781 KDM5CP41229 1560 aa12.86□□□□□ -0.35
ERCC4-206ENST00000574781 UHRF1BP1Q6BDS2 1440 aa12.85□□□□□ -0.35
ERCC4-206ENST00000574781 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
ERCC4-206ENST00000574781 ABCA6Q8N139 1617 aa12.83□□□□□ -0.36
ERCC4-206ENST00000574781 GGT6Q6P531 493 aa12.82□□□□□ -0.36
ERCC4-206ENST00000574781 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
ERCC4-206ENST00000574781 ABCC1P33527 1531 aa12.82□□□□□ -0.36
ERCC4-206ENST00000574781 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
ERCC4-206ENST00000574781 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
ERCC4-206ENST00000574781 FYCO1Q9BQS8 1478 aa12.81□□□□□ -0.36
ERCC4-206ENST00000574781 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
ERCC4-206ENST00000574781 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
ERCC4-206ENST00000574781 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
ERCC4-206ENST00000574781 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
ERCC4-206ENST00000574781 ZMYM3Q14202 1370 aa12.8□□□□□ -0.36
ERCC4-206ENST00000574781 MTUS2Q5JR59 1369 aa12.8□□□□□ -0.36
ERCC4-206ENST00000574781 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
ERCC4-206ENST00000574781 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
ERCC4-206ENST00000574781 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
ERCC4-206ENST00000574781 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
ERCC4-206ENST00000574781 SETD1BQ9UPS6 1966 aaKnown RBP12.78□□□□□ -0.36
ERCC4-206ENST00000574781 AGLP35573 1532 aa12.78□□□□□ -0.36
ERCC4-206ENST00000574781 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
ERCC4-206ENST00000574781 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.36
ERCC4-206ENST00000574781 REREQ9P2R6 1566 aa12.77□□□□□ -0.36
ERCC4-206ENST00000574781 C3P01024 1663 aa12.77□□□□□ -0.36
ERCC4-206ENST00000574781 STRCQ7RTU9 1775 aa12.77□□□□□ -0.36
ERCC4-206ENST00000574781 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
ERCC4-206ENST00000574781 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
ERCC4-206ENST00000574781 CNTLNQ9NXG0 1405 aa12.75□□□□□ -0.37
ERCC4-206ENST00000574781 KIAA1107Q9UPP5 1409 aa12.74□□□□□ -0.37
ERCC4-206ENST00000574781 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
ERCC4-206ENST00000574781 PTPRTO14522 1441 aa12.73□□□□□ -0.37
ERCC4-206ENST00000574781 A2MP01023 1474 aa12.72□□□□□ -0.37
ERCC4-206ENST00000574781 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
ERCC4-206ENST00000574781 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
ERCC4-206ENST00000574781 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
ERCC4-206ENST00000574781 DISP3Q9P2K9 1392 aa12.71□□□□□ -0.37
ERCC4-206ENST00000574781 KIF3BO15066 747 aa12.71□□□□□ -0.37
ERCC4-206ENST00000574781 CLCN6P51797 869 aa12.71□□□□□ -0.37
ERCC4-206ENST00000574781 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
ERCC4-206ENST00000574781 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
ERCC4-206ENST00000574781 NPATQ14207 1427 aa12.7□□□□□ -0.38
ERCC4-206ENST00000574781 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
ERCC4-206ENST00000574781 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
ERCC4-206ENST00000574781 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
ERCC4-206ENST00000574781 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
ERCC4-206ENST00000574781 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
ERCC4-206ENST00000574781 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
ERCC4-206ENST00000574781 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
ERCC4-206ENST00000574781 UBAP1LF5GYI3 381 aa12.67□□□□□ -0.38
ERCC4-206ENST00000574781 PTPRKQ15262 1439 aa12.67□□□□□ -0.38
ERCC4-206ENST00000574781 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
ERCC4-206ENST00000574781 PKD2Q13563 968 aa12.66□□□□□ -0.38
ERCC4-206ENST00000574781 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
ERCC4-206ENST00000574781 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
ERCC4-206ENST00000574781 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
ERCC4-206ENST00000574781 TSPY4P0CV99 314 aa12.65□□□□□ -0.38
ERCC4-206ENST00000574781 TSPY10P0CW01 314 aa12.65□□□□□ -0.38
ERCC4-206ENST00000574781 PROM2Q8N271 834 aa12.65□□□□□ -0.38
ERCC4-206ENST00000574781 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
ERCC4-206ENST00000574781 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
ERCC4-206ENST00000574781 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
ERCC4-206ENST00000574781 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
ERCC4-206ENST00000574781 NCOA2Q15596 1464 aa12.63□□□□□ -0.39
ERCC4-206ENST00000574781 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
ERCC4-206ENST00000574781 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
ERCC4-206ENST00000574781 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
ERCC4-206ENST00000574781 TNRQ92752 1358 aa12.6□□□□□ -0.39
ERCC4-206ENST00000574781 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
ERCC4-206ENST00000574781 CEP170BQ9Y4F5 1589 aaPredicted RBP12.6□□□□□ -0.39
ERCC4-206ENST00000574781 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
ERCC4-206ENST00000574781 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
ERCC4-206ENST00000574781 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
ERCC4-206ENST00000574781 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
ERCC4-206ENST00000574781 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
ERCC4-206ENST00000574781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
ERCC4-206ENST00000574781 THEMISQ8N1K5 641 aaPredicted RBP12.58□□□□□ -0.4
ERCC4-206ENST00000574781 MYO3AQ8NEV4 1616 aa12.58□□□□□ -0.4
ERCC4-206ENST00000574781 SOCS7O14512 581 aa12.57□□□□□ -0.4
ERCC4-206ENST00000574781 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
ERCC4-206ENST00000574781 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
ERCC4-206ENST00000574781 PLA2R1Q13018 1463 aa12.57□□□□□ -0.4
ERCC4-206ENST00000574781 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
ERCC4-206ENST00000574781 MIA2Q96PC5 1412 aa12.55□□□□□ -0.4
ERCC4-206ENST00000574781 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
ERCC4-206ENST00000574781 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
ERCC4-206ENST00000574781 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
ERCC4-206ENST00000574781 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
ERCC4-206ENST00000574781 HSPA1LP34931 641 aa12.53□□□□□ -0.4
ERCC4-206ENST00000574781 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
ERCC4-206ENST00000574781 ZNF142P52746 1687 aaPredicted RBP12.53□□□□□ -0.4
ERCC4-206ENST00000574781 VPS8Q8N3P4 1428 aa12.53□□□□□ -0.4
ERCC4-206ENST00000574781 PZPP20742 1482 aa12.53□□□□□ -0.4
ERCC4-206ENST00000574781 TOM1O60784 492 aa12.52□□□□□ -0.41
ERCC4-206ENST00000574781 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.41
ERCC4-206ENST00000574781 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
ERCC4-206ENST00000574781 SPATA31D1Q6ZQQ2 1576 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms