RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 SHANK2Q9UPX8 1470 aa19.47■□□□□ 0.71
TVP23A-207ENST00000573360 ABCC1P33527 1531 aa19.46■□□□□ 0.71
TVP23A-207ENST00000573360 ARHGEF5Q12774 1597 aa19.43■□□□□ 0.7
TVP23A-207ENST00000573360 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
TVP23A-207ENST00000573360 TSPOAP1O95153 1857 aa19.43■□□□□ 0.7
TVP23A-207ENST00000573360 NBPF1Q3BBV0 1214 aa19.41■□□□□ 0.7
TVP23A-207ENST00000573360 ADGBQ8N7X0 1667 aa19.4■□□□□ 0.7
TVP23A-207ENST00000573360 FAM135AQ9P2D6 1515 aa19.4■□□□□ 0.7
TVP23A-207ENST00000573360 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
TVP23A-207ENST00000573360 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
TVP23A-207ENST00000573360 RPRD2Q5VT52 1461 aaKnown RBP19.39■□□□□ 0.69
TVP23A-207ENST00000573360 ZNF518AQ6AHZ1 1483 aa19.38■□□□□ 0.69
TVP23A-207ENST00000573360 CROCC2H7BZ55 1655 aa19.37■□□□□ 0.69
TVP23A-207ENST00000573360 YEATS2Q9ULM3 1422 aa19.37■□□□□ 0.69
TVP23A-207ENST00000573360 ABCA9Q8IUA7 1624 aa19.37■□□□□ 0.69
TVP23A-207ENST00000573360 ATP7AQ04656 1500 aa19.37■□□□□ 0.69
TVP23A-207ENST00000573360 DUOX2Q9NRD8 1548 aa19.36■□□□□ 0.69
TVP23A-207ENST00000573360 C11orf95C9JLR9 678 aaPredicted RBP19.35■□□□□ 0.69
TVP23A-207ENST00000573360 BCANQ96GW7 911 aa19.35■□□□□ 0.69
TVP23A-207ENST00000573360 ST20-MTHFSA0A0A6YYL1 179 aa19.34■□□□□ 0.69
TVP23A-207ENST00000573360 ANP32CO43423 234 aa19.34■□□□□ 0.69
TVP23A-207ENST00000573360 POGZQ7Z3K3 1410 aa19.33■□□□□ 0.69
TVP23A-207ENST00000573360 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.69
TVP23A-207ENST00000573360 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.69
TVP23A-207ENST00000573360 ROCK2O75116 1388 aaKnown RBP19.33■□□□□ 0.68
TVP23A-207ENST00000573360 A2MP01023 1474 aa19.32■□□□□ 0.68
TVP23A-207ENST00000573360 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
TVP23A-207ENST00000573360 ERBINQ96RT1 1412 aa19.31■□□□□ 0.68
TVP23A-207ENST00000573360 ZFYVE16Q7Z3T8 1539 aa19.31■□□□□ 0.68
TVP23A-207ENST00000573360 RTEL1-TNFRSF6BF6WH68 1400 aa19.29■□□□□ 0.68
TVP23A-207ENST00000573360 WASHC2AQ641Q2 1341 aa19.29■□□□□ 0.68
TVP23A-207ENST00000573360 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
TVP23A-207ENST00000573360 USP47Q96K76 1375 aa19.27■□□□□ 0.68
TVP23A-207ENST00000573360 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
TVP23A-207ENST00000573360 PLA2R1Q13018 1463 aa19.25■□□□□ 0.67
TVP23A-207ENST00000573360 TEX14Q8IWB6 1497 aa19.24■□□□□ 0.67
TVP23A-207ENST00000573360 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
TVP23A-207ENST00000573360 TMEM132EQ6IEE7 984 aa19.23■□□□□ 0.67
TVP23A-207ENST00000573360 STK26Q9P289 416 aa19.22■□□□□ 0.67
TVP23A-207ENST00000573360 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
TVP23A-207ENST00000573360 NEO1Q92859 1461 aa19.21■□□□□ 0.67
TVP23A-207ENST00000573360 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
TVP23A-207ENST00000573360 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
TVP23A-207ENST00000573360 KIF7Q2M1P5 1343 aa19.19■□□□□ 0.66
TVP23A-207ENST00000573360 IDI1Q13907 227 aa19.19■□□□□ 0.66
TVP23A-207ENST00000573360 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
TVP23A-207ENST00000573360 TRAK1Q9UPV9 953 aa19.19■□□□□ 0.66
TVP23A-207ENST00000573360 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
TVP23A-207ENST00000573360 COL17A1Q9UMD9 1497 aaPredicted RBP19.18■□□□□ 0.66
TVP23A-207ENST00000573360 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
TVP23A-207ENST00000573360 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
TVP23A-207ENST00000573360 DIP2BQ9P265 1576 aa19.15■□□□□ 0.66
TVP23A-207ENST00000573360 MLH3Q9UHC1 1453 aa19.14■□□□□ 0.65
TVP23A-207ENST00000573360 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
TVP23A-207ENST00000573360 FKBP8Q14318 412 aa19.13■□□□□ 0.65
TVP23A-207ENST00000573360 NEFLP07196 543 aa19.13■□□□□ 0.65
TVP23A-207ENST00000573360 MYT1Q01538 1121 aa19.12■□□□□ 0.65
TVP23A-207ENST00000573360 ATP10AO60312 1499 aa19.12■□□□□ 0.65
TVP23A-207ENST00000573360 HECW2Q9P2P5 1572 aa19.12■□□□□ 0.65
TVP23A-207ENST00000573360 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
TVP23A-207ENST00000573360 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
TVP23A-207ENST00000573360 NPATQ14207 1427 aa19.11■□□□□ 0.65
TVP23A-207ENST00000573360 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
TVP23A-207ENST00000573360 KDM5DQ9BY66 1539 aa19.09■□□□□ 0.65
TVP23A-207ENST00000573360 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
TVP23A-207ENST00000573360 TMC1Q8TDI8 760 aa19.08■□□□□ 0.64
TVP23A-207ENST00000573360 UNC13BO14795 1591 aa19.07■□□□□ 0.64
TVP23A-207ENST00000573360 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
TVP23A-207ENST00000573360 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
TVP23A-207ENST00000573360 PRDM15P57071 1507 aaPredicted RBP19.06■□□□□ 0.64
TVP23A-207ENST00000573360 CCDC184Q52MB2 194 aa19.05■□□□□ 0.64
TVP23A-207ENST00000573360 PRAG1Q86YV5 1406 aa19.05■□□□□ 0.64
TVP23A-207ENST00000573360 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
TVP23A-207ENST00000573360 NOS1P29475 1434 aa19.05■□□□□ 0.64
TVP23A-207ENST00000573360 IQGAP3Q86VI3 1631 aa19.05■□□□□ 0.64
TVP23A-207ENST00000573360 TMF1P82094 1093 aa19.03■□□□□ 0.64
TVP23A-207ENST00000573360 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
TVP23A-207ENST00000573360 FRMPD1Q5SYB0 1578 aa19.02■□□□□ 0.64
TVP23A-207ENST00000573360 KDM5CP41229 1560 aa19.02■□□□□ 0.64
TVP23A-207ENST00000573360 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.63
TVP23A-207ENST00000573360 E9PCH4 1651 aa19.01■□□□□ 0.63
TVP23A-207ENST00000573360 DIP2CQ9Y2E4 1556 aa19.01■□□□□ 0.63
TVP23A-207ENST00000573360 VGFO15240 615 aaPredicted RBP19■□□□□ 0.63
TVP23A-207ENST00000573360 HNRNPUQ00839 825 aaKnown RBP eCLIP19■□□□□ 0.63
TVP23A-207ENST00000573360 MAGI2Q86UL8 1455 aa18.99■□□□□ 0.63
TVP23A-207ENST00000573360 SPATA31E1Q6ZUB1 1445 aa18.99■□□□□ 0.63
TVP23A-207ENST00000573360 PANK3Q9H999 370 aa18.98■□□□□ 0.63
TVP23A-207ENST00000573360 CEP152O94986 1710 aa18.98■□□□□ 0.63
TVP23A-207ENST00000573360 POGKQ9P215 609 aa18.98■□□□□ 0.63
TVP23A-207ENST00000573360 SLC52A1Q9NWF4 448 aa18.98■□□□□ 0.63
TVP23A-207ENST00000573360 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
TVP23A-207ENST00000573360 GLI2P10070 1586 aa18.97■□□□□ 0.63
TVP23A-207ENST00000573360 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
TVP23A-207ENST00000573360 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
TVP23A-207ENST00000573360 NUTM2FA1L443 756 aa18.96■□□□□ 0.63
TVP23A-207ENST00000573360 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
TVP23A-207ENST00000573360 ABCC3O15438 1527 aa18.95■□□□□ 0.62
TVP23A-207ENST00000573360 CLTCL1P53675 1640 aa18.95■□□□□ 0.62
TVP23A-207ENST00000573360 DISP3Q9P2K9 1392 aa18.95■□□□□ 0.62
TVP23A-207ENST00000573360 PTPRTO14522 1441 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms