RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 PBX2P40425 430 aa9.11□□□□□ -0.95
NCBP3-202ENST00000572988 PDIA6Q15084 440 aa9.11□□□□□ -0.95
NCBP3-202ENST00000572988 PPP4R3BQ5MIZ7 849 aa9.1□□□□□ -0.95
NCBP3-202ENST00000572988 DDX12PQ92771 950 aa9.09□□□□□ -0.95
NCBP3-202ENST00000572988 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
NCBP3-202ENST00000572988 NESP48681 1621 aa9.07□□□□□ -0.96
NCBP3-202ENST00000572988 GRXCR2A6NFK2 248 aa9.07□□□□□ -0.96
NCBP3-202ENST00000572988 ERCC6Q03468 1493 aa9.07□□□□□ -0.96
NCBP3-202ENST00000572988 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
NCBP3-202ENST00000572988 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
NCBP3-202ENST00000572988 BAZ1AQ9NRL2 1556 aaPredicted RBP9.07□□□□□ -0.96
NCBP3-202ENST00000572988 ARHGAP33O14559 1287 aa9.06□□□□□ -0.96
NCBP3-202ENST00000572988 FOSBP53539 338 aa9.06□□□□□ -0.96
NCBP3-202ENST00000572988 JPH4Q96JJ6 628 aa9.06□□□□□ -0.96
NCBP3-202ENST00000572988 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
NCBP3-202ENST00000572988 PHF14O94880 888 aa9.05□□□□□ -0.96
NCBP3-202ENST00000572988 PSEN2P49810 448 aa9.05□□□□□ -0.96
NCBP3-202ENST00000572988 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
NCBP3-202ENST00000572988 ADGRD1Q6QNK2 874 aa9.05□□□□□ -0.96
NCBP3-202ENST00000572988 ZDHHC16Q969W1 377 aa9.04□□□□□ -0.96
NCBP3-202ENST00000572988 PCDHGA10Q9Y5H3 936 aa9.04□□□□□ -0.96
NCBP3-202ENST00000572988 NBR1Q14596 966 aa9.03□□□□□ -0.96
NCBP3-202ENST00000572988 TYW1BQ6NUM6 668 aa9.03□□□□□ -0.96
NCBP3-202ENST00000572988 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
NCBP3-202ENST00000572988 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
NCBP3-202ENST00000572988 EPAS1Q99814 870 aa9.03□□□□□ -0.96
NCBP3-202ENST00000572988 HMGXB3Q12766 1538 aa9.03□□□□□ -0.96
NCBP3-202ENST00000572988 SEMA3EO15041 775 aa9.02□□□□□ -0.97
NCBP3-202ENST00000572988 FBXW7Q969H0 707 aa9.01□□□□□ -0.97
NCBP3-202ENST00000572988 CUX2O14529 1486 aa9.01□□□□□ -0.97
NCBP3-202ENST00000572988 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
NCBP3-202ENST00000572988 KCNK17Q96T54 332 aa9□□□□□ -0.97
NCBP3-202ENST00000572988 ADAM33Q9BZ11 813 aa9□□□□□ -0.97
NCBP3-202ENST00000572988 HRO43593 1189 aa8.99□□□□□ -0.97
NCBP3-202ENST00000572988 PTPREP23469 700 aa8.99□□□□□ -0.97
NCBP3-202ENST00000572988 BCL2L12Q9HB09 334 aa8.99□□□□□ -0.97
NCBP3-202ENST00000572988 PLA2G2EQ9NZK7 142 aa8.99□□□□□ -0.97
NCBP3-202ENST00000572988 HCSTQ9UBK5 93 aa8.99□□□□□ -0.97
NCBP3-202ENST00000572988 PEG3Q9GZU2 1588 aa8.99□□□□□ -0.97
NCBP3-202ENST00000572988 MAP3K7O43318 606 aa8.98□□□□□ -0.97
NCBP3-202ENST00000572988 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
NCBP3-202ENST00000572988 TK2O00142 265 aa8.96□□□□□ -0.98
NCBP3-202ENST00000572988 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
NCBP3-202ENST00000572988 OSBPP22059 807 aa8.95□□□□□ -0.98
NCBP3-202ENST00000572988 EN1Q05925 392 aaPredicted RBP8.95□□□□□ -0.98
NCBP3-202ENST00000572988 C6orf132Q5T0Z8 1188 aa8.95□□□□□ -0.98
NCBP3-202ENST00000572988 TESPA1A2RU30 521 aaPredicted RBP8.94□□□□□ -0.98
NCBP3-202ENST00000572988 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
NCBP3-202ENST00000572988 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
NCBP3-202ENST00000572988 RSF1Q96T23 1441 aaPredicted RBP8.92□□□□□ -0.98
NCBP3-202ENST00000572988 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
NCBP3-202ENST00000572988 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
NCBP3-202ENST00000572988 TSR1Q2NL82 804 aaKnown RBP8.92□□□□□ -0.98
NCBP3-202ENST00000572988 WIZO95785 1651 aa8.91□□□□□ -0.98
NCBP3-202ENST00000572988 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.98
NCBP3-202ENST00000572988 NUTM2FA1L443 756 aa8.9□□□□□ -0.98
NCBP3-202ENST00000572988 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
NCBP3-202ENST00000572988 COL9A1P20849 921 aa8.89□□□□□ -0.99
NCBP3-202ENST00000572988 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
NCBP3-202ENST00000572988 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
NCBP3-202ENST00000572988 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
NCBP3-202ENST00000572988 CDHR5Q9HBB8 845 aa8.87□□□□□ -0.99
NCBP3-202ENST00000572988 PTPN5P54829 565 aa8.86□□□□□ -0.99
NCBP3-202ENST00000572988 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
NCBP3-202ENST00000572988 PROX2Q3B8N5 592 aa8.85□□□□□ -0.99
NCBP3-202ENST00000572988 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
NCBP3-202ENST00000572988 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
NCBP3-202ENST00000572988 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
NCBP3-202ENST00000572988 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
NCBP3-202ENST00000572988 CDCA7LQ96GN5 454 aa8.82□□□□□ -1
NCBP3-202ENST00000572988 BCANQ96GW7 911 aa8.82□□□□□ -1
NCBP3-202ENST00000572988 CFTRP13569 1480 aa8.82□□□□□ -1
NCBP3-202ENST00000572988 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
NCBP3-202ENST00000572988 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
NCBP3-202ENST00000572988 FCHSD2O94868 740 aa8.81□□□□□ -1
NCBP3-202ENST00000572988 PRSS12P56730 875 aa8.81□□□□□ -1
NCBP3-202ENST00000572988 NPDC1Q9NQX5 325 aaPredicted RBP8.81□□□□□ -1
NCBP3-202ENST00000572988 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
NCBP3-202ENST00000572988 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
NCBP3-202ENST00000572988 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
NCBP3-202ENST00000572988 PTGDRQ13258 359 aa8.8□□□□□ -1
NCBP3-202ENST00000572988 PACS2Q86VP3 889 aa8.8□□□□□ -1
NCBP3-202ENST00000572988 GPIHBP1Q8IV16 184 aa8.8□□□□□ -1
NCBP3-202ENST00000572988 RABGEF1Q9UJ41 708 aa8.8□□□□□ -1
NCBP3-202ENST00000572988 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
NCBP3-202ENST00000572988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
NCBP3-202ENST00000572988 NBPF3Q9H094 633 aa8.79□□□□□ -1
NCBP3-202ENST00000572988 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
NCBP3-202ENST00000572988 GOLGA8CPA6NN73 597 aa8.78□□□□□ -1
NCBP3-202ENST00000572988 LMOD2Q6P5Q4 547 aa8.78□□□□□ -1
NCBP3-202ENST00000572988 PADI6Q6TGC4 694 aa8.78□□□□□ -1
NCBP3-202ENST00000572988 MRPL50Q8N5N7 158 aaKnown RBP8.78□□□□□ -1
NCBP3-202ENST00000572988 TSKSQ9UJT2 592 aa8.78□□□□□ -1
NCBP3-202ENST00000572988 CCDC88BA6NC98 1476 aa8.77□□□□□ -1
NCBP3-202ENST00000572988 TOP2AP11388 1531 aaKnown RBP8.77□□□□□ -1.01
NCBP3-202ENST00000572988 WDR62O43379 1518 aa8.76□□□□□ -1.01
NCBP3-202ENST00000572988 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
NCBP3-202ENST00000572988 SUPT5HO00267 1087 aaKnown RBP8.75□□□□□ -1.01
NCBP3-202ENST00000572988 HIC1Q14526 733 aa8.75□□□□□ -1.01
NCBP3-202ENST00000572988 WNT2BQ93097 391 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms