RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
USP6-204ENST00000572949 WASHC2AQ641Q2 1341 aa11.76□□□□□ -0.53
USP6-204ENST00000572949 WWC2Q6AWC2 1192 aa11.76□□□□□ -0.53
USP6-204ENST00000572949 MIER1Q8N108 512 aa11.75□□□□□ -0.53
USP6-204ENST00000572949 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
USP6-204ENST00000572949 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
USP6-204ENST00000572949 GBP4Q96PP9 640 aa11.75□□□□□ -0.53
USP6-204ENST00000572949 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
USP6-204ENST00000572949 KIF16BQ96L93 1317 aa11.75□□□□□ -0.53
USP6-204ENST00000572949 PTMSP20962 102 aa11.74□□□□□ -0.53
USP6-204ENST00000572949 H3BQV1 296 aa11.74□□□□□ -0.53
USP6-204ENST00000572949 KIF3BO15066 747 aa11.74□□□□□ -0.53
USP6-204ENST00000572949 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
USP6-204ENST00000572949 PSME1Q06323 249 aa11.72□□□□□ -0.53
USP6-204ENST00000572949 NEXNQ0ZGT2 675 aa11.72□□□□□ -0.53
USP6-204ENST00000572949 KTN1Q86UP2 1357 aaKnown RBP11.72□□□□□ -0.53
USP6-204ENST00000572949 APPP05067 770 aa11.72□□□□□ -0.53
USP6-204ENST00000572949 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
USP6-204ENST00000572949 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
USP6-204ENST00000572949 ROCK2O75116 1388 aaKnown RBP11.72□□□□□ -0.53
USP6-204ENST00000572949 NOL8Q76FK4 1167 aaKnown RBP11.72□□□□□ -0.53
USP6-204ENST00000572949 TEFQ10587 303 aa11.72□□□□□ -0.53
USP6-204ENST00000572949 ODF2Q5BJF6 829 aa11.72□□□□□ -0.53
USP6-204ENST00000572949 ATF3P18847 181 aa11.71□□□□□ -0.53
USP6-204ENST00000572949 CCDC180Q9P1Z9 1646 aa11.71□□□□□ -0.53
USP6-204ENST00000572949 TPM1P09493 284 aa11.71□□□□□ -0.54
USP6-204ENST00000572949 PCMTD1Q96MG8 357 aaPredicted RBP11.71□□□□□ -0.54
USP6-204ENST00000572949 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.54
USP6-204ENST00000572949 TMEM132AQ24JP5 1023 aa11.7□□□□□ -0.54
USP6-204ENST00000572949 CCDC47Q96A33 483 aaKnown RBP11.7□□□□□ -0.54
USP6-204ENST00000572949 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
USP6-204ENST00000572949 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
USP6-204ENST00000572949 TRIM29Q14134 588 aa11.69□□□□□ -0.54
USP6-204ENST00000572949 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
USP6-204ENST00000572949 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
USP6-204ENST00000572949 CT47A1Q5JQC4 288 aaPredicted RBP11.68□□□□□ -0.54
USP6-204ENST00000572949 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP6-204ENST00000572949 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
USP6-204ENST00000572949 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
USP6-204ENST00000572949 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
USP6-204ENST00000572949 CCDC70Q6NSX1 233 aa11.68□□□□□ -0.54
USP6-204ENST00000572949 PKD2Q13563 968 aa11.67□□□□□ -0.54
USP6-204ENST00000572949 TNNT3P45378 269 aaPredicted RBP11.67□□□□□ -0.54
USP6-204ENST00000572949 C9orf78Q9NZ63 289 aaPredicted RBP11.67□□□□□ -0.54
USP6-204ENST00000572949 ERICH2A1L162 156 aa11.67□□□□□ -0.54
USP6-204ENST00000572949 SIN3AQ96ST3 1273 aa11.66□□□□□ -0.54
USP6-204ENST00000572949 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
USP6-204ENST00000572949 PMFBP1Q8TBY8 1022 aa11.65□□□□□ -0.54
USP6-204ENST00000572949 RILPL2Q969X0 211 aa11.65□□□□□ -0.54
USP6-204ENST00000572949 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
USP6-204ENST00000572949 PHF14O94880 888 aa11.65□□□□□ -0.54
USP6-204ENST00000572949 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
USP6-204ENST00000572949 COG3Q96JB2 828 aa11.65□□□□□ -0.54
USP6-204ENST00000572949 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
USP6-204ENST00000572949 TRDNQ13061 729 aa11.64□□□□□ -0.55
USP6-204ENST00000572949 EEA1Q15075 1411 aa11.64□□□□□ -0.55
USP6-204ENST00000572949 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
USP6-204ENST00000572949 IPO7O95373 1038 aaKnown RBP11.64□□□□□ -0.55
USP6-204ENST00000572949 ZFYVE27Q5T4F4 411 aa11.64□□□□□ -0.55
USP6-204ENST00000572949 EIF2S2P20042 333 aaKnown RBP11.64□□□□□ -0.55
USP6-204ENST00000572949 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
USP6-204ENST00000572949 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
USP6-204ENST00000572949 ANKRD20A12PQ8NF67 263 aa11.64□□□□□ -0.55
USP6-204ENST00000572949 ST18O60284 1047 aa11.63□□□□□ -0.55
USP6-204ENST00000572949 CCAR2Q8N163 923 aaKnown RBP11.63□□□□□ -0.55
USP6-204ENST00000572949 ARID3AQ99856 593 aa11.63□□□□□ -0.55
USP6-204ENST00000572949 NFXL1Q6ZNB6 911 aa11.63□□□□□ -0.55
USP6-204ENST00000572949 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
USP6-204ENST00000572949 FYB1O15117 783 aa11.62□□□□□ -0.55
USP6-204ENST00000572949 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
USP6-204ENST00000572949 GOLGA6L19H0YKK7 550 aa11.62□□□□□ -0.55
USP6-204ENST00000572949 DDX58O95786 925 aaKnown RBP11.62□□□□□ -0.55
USP6-204ENST00000572949 NUP155O75694 1391 aa11.62□□□□□ -0.55
USP6-204ENST00000572949 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
USP6-204ENST00000572949 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
USP6-204ENST00000572949 EPS15P42566 896 aa11.61□□□□□ -0.55
USP6-204ENST00000572949 SETQ01105 290 aaPredicted RBP11.61□□□□□ -0.55
USP6-204ENST00000572949 CPLX1O14810 134 aa11.61□□□□□ -0.55
USP6-204ENST00000572949 RRP12Q5JTH9 1297 aaKnown RBP11.61□□□□□ -0.55
USP6-204ENST00000572949 KAT6BQ8WYB5 2073 aa11.6□□□□□ -0.55
USP6-204ENST00000572949 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
USP6-204ENST00000572949 TRAK1Q9UPV9 953 aa11.6□□□□□ -0.55
USP6-204ENST00000572949 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
USP6-204ENST00000572949 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
USP6-204ENST00000572949 DIAPH3Q9NSV4 1193 aa11.6□□□□□ -0.55
USP6-204ENST00000572949 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
USP6-204ENST00000572949 PPM1FP49593 454 aaPredicted RBP11.59□□□□□ -0.55
USP6-204ENST00000572949 BECN2A8MW95 431 aa11.59□□□□□ -0.55
USP6-204ENST00000572949 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
USP6-204ENST00000572949 SLKQ9H2G2 1235 aaPredicted RBP11.59□□□□□ -0.55
USP6-204ENST00000572949 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
USP6-204ENST00000572949 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
USP6-204ENST00000572949 CUX2O14529 1486 aa11.58□□□□□ -0.56
USP6-204ENST00000572949 ANKRD30AQ9BXX3 1397 aa11.58□□□□□ -0.56
USP6-204ENST00000572949 CCDC146Q8IYE0 955 aa11.58□□□□□ -0.56
USP6-204ENST00000572949 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
USP6-204ENST00000572949 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
USP6-204ENST00000572949 RDXP35241 583 aaKnown RBP11.57□□□□□ -0.56
USP6-204ENST00000572949 HNRNPMP52272 730 aaKnown RBP eCLIP11.57□□□□□ -0.56
USP6-204ENST00000572949 CARMIL1Q5VZK9 1371 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms