RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
TOM1L1-215ENST00000572905 PPP1R3GB7ZBB8 358 aa11.93□□□□□ -0.5
TOM1L1-215ENST00000572905 COL9A1P20849 921 aa11.93□□□□□ -0.5
TOM1L1-215ENST00000572905 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
TOM1L1-215ENST00000572905 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
TOM1L1-215ENST00000572905 PDIA6Q15084 440 aa11.92□□□□□ -0.5
TOM1L1-215ENST00000572905 EPAS1Q99814 870 aa11.92□□□□□ -0.5
TOM1L1-215ENST00000572905 NBR1Q14596 966 aa11.91□□□□□ -0.5
TOM1L1-215ENST00000572905 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
TOM1L1-215ENST00000572905 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
TOM1L1-215ENST00000572905 HCSTQ9UBK5 93 aa11.9□□□□□ -0.5
TOM1L1-215ENST00000572905 SPDYE16A6NNV3 312 aaPredicted RBP11.89□□□□□ -0.51
TOM1L1-215ENST00000572905 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
TOM1L1-215ENST00000572905 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
TOM1L1-215ENST00000572905 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
TOM1L1-215ENST00000572905 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
TOM1L1-215ENST00000572905 NBPF3Q9H094 633 aa11.86□□□□□ -0.51
TOM1L1-215ENST00000572905 GRXCR2A6NFK2 248 aa11.84□□□□□ -0.51
TOM1L1-215ENST00000572905 MAP3K7O43318 606 aa11.84□□□□□ -0.51
TOM1L1-215ENST00000572905 PTPN5P54829 565 aa11.84□□□□□ -0.51
TOM1L1-215ENST00000572905 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
TOM1L1-215ENST00000572905 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
TOM1L1-215ENST00000572905 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
TOM1L1-215ENST00000572905 WNT2BQ93097 391 aa11.82□□□□□ -0.52
TOM1L1-215ENST00000572905 RABGEF1Q9UJ41 708 aa11.82□□□□□ -0.52
TOM1L1-215ENST00000572905 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
TOM1L1-215ENST00000572905 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
TOM1L1-215ENST00000572905 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
TOM1L1-215ENST00000572905 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
TOM1L1-215ENST00000572905 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
TOM1L1-215ENST00000572905 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
TOM1L1-215ENST00000572905 BCANQ96GW7 911 aa11.76□□□□□ -0.53
TOM1L1-215ENST00000572905 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
TOM1L1-215ENST00000572905 ANKK1Q8NFD2 765 aa11.73□□□□□ -0.53
TOM1L1-215ENST00000572905 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
TOM1L1-215ENST00000572905 OSBPP22059 807 aa11.72□□□□□ -0.53
TOM1L1-215ENST00000572905 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
TOM1L1-215ENST00000572905 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
TOM1L1-215ENST00000572905 BCAMP50895 628 aa11.71□□□□□ -0.53
TOM1L1-215ENST00000572905 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
TOM1L1-215ENST00000572905 ARHGEF1Q92888 912 aaKnown RBP11.7□□□□□ -0.54
TOM1L1-215ENST00000572905 ZFRQ96KR1 1074 aaKnown RBP11.7□□□□□ -0.54
TOM1L1-215ENST00000572905 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
TOM1L1-215ENST00000572905 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
TOM1L1-215ENST00000572905 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
TOM1L1-215ENST00000572905 MLLT3P42568 568 aaPredicted RBP11.67□□□□□ -0.54
TOM1L1-215ENST00000572905 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
TOM1L1-215ENST00000572905 PRSS12P56730 875 aa11.66□□□□□ -0.54
TOM1L1-215ENST00000572905 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
TOM1L1-215ENST00000572905 SMAPO00193 183 aa11.65□□□□□ -0.54
TOM1L1-215ENST00000572905 CERKQ8TCT0 537 aa11.65□□□□□ -0.54
TOM1L1-215ENST00000572905 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
TOM1L1-215ENST00000572905 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
TOM1L1-215ENST00000572905 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
TOM1L1-215ENST00000572905 LRCH3Q96II8 777 aa11.6□□□□□ -0.55
TOM1L1-215ENST00000572905 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
TOM1L1-215ENST00000572905 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
TOM1L1-215ENST00000572905 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
TOM1L1-215ENST00000572905 NBPF26B4DH59 902 aa11.59□□□□□ -0.55
TOM1L1-215ENST00000572905 TATDN2Q93075 761 aa11.59□□□□□ -0.55
TOM1L1-215ENST00000572905 HPS5Q9UPZ3 1129 aa11.58□□□□□ -0.56
TOM1L1-215ENST00000572905 PADI6Q6TGC4 694 aa11.57□□□□□ -0.56
TOM1L1-215ENST00000572905 NUDT18Q6ZVK8 323 aa11.57□□□□□ -0.56
TOM1L1-215ENST00000572905 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
TOM1L1-215ENST00000572905 SEMA3EO15041 775 aa11.55□□□□□ -0.56
TOM1L1-215ENST00000572905 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
TOM1L1-215ENST00000572905 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
TOM1L1-215ENST00000572905 TSR3Q9UJK0 312 aaKnown RBP11.54□□□□□ -0.56
TOM1L1-215ENST00000572905 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
TOM1L1-215ENST00000572905 RNF40O75150 1001 aa11.51□□□□□ -0.57
TOM1L1-215ENST00000572905 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
TOM1L1-215ENST00000572905 PPP4CP60510 307 aa11.5□□□□□ -0.57
TOM1L1-215ENST00000572905 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
TOM1L1-215ENST00000572905 IFFO2Q5TF58 517 aa11.49□□□□□ -0.57
TOM1L1-215ENST00000572905 PTGDRQ13258 359 aa11.48□□□□□ -0.57
TOM1L1-215ENST00000572905 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
TOM1L1-215ENST00000572905 HDGFP51858 240 aaKnown RBP11.46□□□□□ -0.57
TOM1L1-215ENST00000572905 A0A0G2JS52 829 aa11.45□□□□□ -0.58
TOM1L1-215ENST00000572905 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
TOM1L1-215ENST00000572905 KCNC4Q03721 635 aa11.42□□□□□ -0.58
TOM1L1-215ENST00000572905 EYA1Q99502 592 aa11.42□□□□□ -0.58
TOM1L1-215ENST00000572905 TESPA1A2RU30 521 aaPredicted RBP11.41□□□□□ -0.58
TOM1L1-215ENST00000572905 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
TOM1L1-215ENST00000572905 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
TOM1L1-215ENST00000572905 FCHSD2O94868 740 aa11.4□□□□□ -0.58
TOM1L1-215ENST00000572905 APLP1P51693 650 aa11.37□□□□□ -0.59
TOM1L1-215ENST00000572905 SMYD5Q6GMV2 418 aa11.37□□□□□ -0.59
TOM1L1-215ENST00000572905 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
TOM1L1-215ENST00000572905 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
TOM1L1-215ENST00000572905 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
TOM1L1-215ENST00000572905 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
TOM1L1-215ENST00000572905 MTRQ99707 1265 aa11.35□□□□□ -0.59
TOM1L1-215ENST00000572905 DNAJB2P25686 324 aa11.34□□□□□ -0.59
TOM1L1-215ENST00000572905 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
TOM1L1-215ENST00000572905 TJAP1Q5JTD0 557 aa11.34□□□□□ -0.59
TOM1L1-215ENST00000572905 TPRNQ4KMQ1 711 aa11.33□□□□□ -0.6
TOM1L1-215ENST00000572905 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
TOM1L1-215ENST00000572905 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
TOM1L1-215ENST00000572905 RGS20O76081 388 aa11.31□□□□□ -0.6
TOM1L1-215ENST00000572905 HIC1Q14526 733 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms