RNA–Protein interactions for RNA: ENST00000572795.1

PITPNM3-203, Transcript of PITPNM family member 3, humanhuman

TSL 1 (best)

Gene PITPNM3, Length 5,369 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM3-203ENST00000572795 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
PITPNM3-203ENST00000572795 PHF14O94880 888 aa16.25■□□□□ 0.19
PITPNM3-203ENST00000572795 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
PITPNM3-203ENST00000572795 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
PITPNM3-203ENST00000572795 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
PITPNM3-203ENST00000572795 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
PITPNM3-203ENST00000572795 FAM69CQ0P6D2 419 aa16.23■□□□□ 0.19
PITPNM3-203ENST00000572795 PDE4AP27815 886 aa16.23■□□□□ 0.19
PITPNM3-203ENST00000572795 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
PITPNM3-203ENST00000572795 MFAP1P55081 439 aaKnown RBP16.23■□□□□ 0.19
PITPNM3-203ENST00000572795 MYOM3Q5VTT5 1437 aa16.23■□□□□ 0.19
PITPNM3-203ENST00000572795 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
PITPNM3-203ENST00000572795 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
PITPNM3-203ENST00000572795 TRAK1Q9UPV9 953 aa16.22■□□□□ 0.19
PITPNM3-203ENST00000572795 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
PITPNM3-203ENST00000572795 TPM4P67936 248 aa16.21■□□□□ 0.19
PITPNM3-203ENST00000572795 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
PITPNM3-203ENST00000572795 NESP48681 1621 aa16.21■□□□□ 0.19
PITPNM3-203ENST00000572795 FAM161AQ3B820 660 aa16.21■□□□□ 0.19
PITPNM3-203ENST00000572795 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
PITPNM3-203ENST00000572795 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
PITPNM3-203ENST00000572795 GOLGA6L1Q8N7Z2 621 aa16.19■□□□□ 0.18
PITPNM3-203ENST00000572795 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
PITPNM3-203ENST00000572795 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
PITPNM3-203ENST00000572795 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
PITPNM3-203ENST00000572795 CUX1P39880 1505 aa16.17■□□□□ 0.18
PITPNM3-203ENST00000572795 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
PITPNM3-203ENST00000572795 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
PITPNM3-203ENST00000572795 DHX57Q6P158 1386 aaKnown RBP16.16■□□□□ 0.18
PITPNM3-203ENST00000572795 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
PITPNM3-203ENST00000572795 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
PITPNM3-203ENST00000572795 FGD6Q6ZV73 1430 aa16.15■□□□□ 0.18
PITPNM3-203ENST00000572795 ST20-MTHFSA0A0A6YYL1 179 aa16.14■□□□□ 0.17
PITPNM3-203ENST00000572795 NUTM2FA1L443 756 aa16.14■□□□□ 0.17
PITPNM3-203ENST00000572795 CASKIN1Q8WXD9 1431 aa16.13■□□□□ 0.17
PITPNM3-203ENST00000572795 ST18O60284 1047 aa16.13■□□□□ 0.17
PITPNM3-203ENST00000572795 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
PITPNM3-203ENST00000572795 AMPHP49418 695 aa16.13■□□□□ 0.17
PITPNM3-203ENST00000572795 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 KIF21BO75037 1637 aa16.12■□□□□ 0.17
PITPNM3-203ENST00000572795 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
PITPNM3-203ENST00000572795 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
PITPNM3-203ENST00000572795 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
PITPNM3-203ENST00000572795 EVC2Q86UK5 1308 aa16.1■□□□□ 0.17
PITPNM3-203ENST00000572795 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
PITPNM3-203ENST00000572795 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
PITPNM3-203ENST00000572795 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
PITPNM3-203ENST00000572795 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
PITPNM3-203ENST00000572795 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
PITPNM3-203ENST00000572795 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
PITPNM3-203ENST00000572795 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.17
PITPNM3-203ENST00000572795 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
PITPNM3-203ENST00000572795 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.16
PITPNM3-203ENST00000572795 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
PITPNM3-203ENST00000572795 HMMRO75330 724 aa16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 SMC4Q9NTJ3 1288 aa16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 SETQ01105 290 aaPredicted RBP16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 PANK3Q9H999 370 aa16.07■□□□□ 0.16
PITPNM3-203ENST00000572795 APBB1O00213 710 aa16.06■□□□□ 0.16
PITPNM3-203ENST00000572795 ZNF330Q9Y3S2 320 aaPredicted RBP16.06■□□□□ 0.16
PITPNM3-203ENST00000572795 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
PITPNM3-203ENST00000572795 ZNF771Q7L3S4 317 aaPredicted RBP16.05■□□□□ 0.16
PITPNM3-203ENST00000572795 LTV1Q96GA3 475 aaPredicted RBP16.05■□□□□ 0.16
PITPNM3-203ENST00000572795 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
PITPNM3-203ENST00000572795 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
PITPNM3-203ENST00000572795 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 USP47Q96K76 1375 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 COG3Q96JB2 828 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
PITPNM3-203ENST00000572795 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
PITPNM3-203ENST00000572795 ATP6V1DQ9Y5K8 247 aa16.03■□□□□ 0.16
PITPNM3-203ENST00000572795 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
PITPNM3-203ENST00000572795 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
PITPNM3-203ENST00000572795 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
PITPNM3-203ENST00000572795 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.16
PITPNM3-203ENST00000572795 GPS2Q13227 327 aa16.02■□□□□ 0.15
PITPNM3-203ENST00000572795 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.15
PITPNM3-203ENST00000572795 GPATCH3Q96I76 525 aa16.01■□□□□ 0.15
PITPNM3-203ENST00000572795 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
PITPNM3-203ENST00000572795 AFAP1Q8N556 730 aa16.01■□□□□ 0.15
PITPNM3-203ENST00000572795 FAM13BQ9NYF5 915 aa16■□□□□ 0.15
PITPNM3-203ENST00000572795 HDAC5Q9UQL6 1122 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms