RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
PRPF8-205ENST00000572621 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
PRPF8-205ENST00000572621 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
PRPF8-205ENST00000572621 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
PRPF8-205ENST00000572621 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
PRPF8-205ENST00000572621 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
PRPF8-205ENST00000572621 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
PRPF8-205ENST00000572621 PLIN1O60240 522 aa17.04■□□□□ 0.32
PRPF8-205ENST00000572621 GPS2Q13227 327 aa17.04■□□□□ 0.32
PRPF8-205ENST00000572621 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
PRPF8-205ENST00000572621 GGT6Q6P531 493 aa17.03■□□□□ 0.32
PRPF8-205ENST00000572621 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
PRPF8-205ENST00000572621 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
PRPF8-205ENST00000572621 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
PRPF8-205ENST00000572621 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.32
PRPF8-205ENST00000572621 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
PRPF8-205ENST00000572621 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
PRPF8-205ENST00000572621 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.32
PRPF8-205ENST00000572621 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
PRPF8-205ENST00000572621 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
PRPF8-205ENST00000572621 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
PRPF8-205ENST00000572621 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
PRPF8-205ENST00000572621 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
PRPF8-205ENST00000572621 EIF4G1Q04637 1599 aaKnown RBP17■□□□□ 0.31
PRPF8-205ENST00000572621 MARCH6O60337 910 aa17■□□□□ 0.31
PRPF8-205ENST00000572621 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
PRPF8-205ENST00000572621 VPS53Q5VIR6 699 aa16.99■□□□□ 0.31
PRPF8-205ENST00000572621 TPM1P09493 284 aa16.98■□□□□ 0.31
PRPF8-205ENST00000572621 CCDC70Q6NSX1 233 aa16.98■□□□□ 0.31
PRPF8-205ENST00000572621 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
PRPF8-205ENST00000572621 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
PRPF8-205ENST00000572621 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
PRPF8-205ENST00000572621 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
PRPF8-205ENST00000572621 TEX35Q5T0J7 233 aa16.96■□□□□ 0.31
PRPF8-205ENST00000572621 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
PRPF8-205ENST00000572621 HOMER1Q86YM7 354 aa16.96■□□□□ 0.31
PRPF8-205ENST00000572621 CRBNQ96SW2 442 aa16.96■□□□□ 0.3
PRPF8-205ENST00000572621 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
PRPF8-205ENST00000572621 NUP155O75694 1391 aa16.95■□□□□ 0.3
PRPF8-205ENST00000572621 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
PRPF8-205ENST00000572621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
PRPF8-205ENST00000572621 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
PRPF8-205ENST00000572621 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
PRPF8-205ENST00000572621 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
PRPF8-205ENST00000572621 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
PRPF8-205ENST00000572621 TERF2IPQ9NYB0 399 aa16.93■□□□□ 0.3
PRPF8-205ENST00000572621 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
PRPF8-205ENST00000572621 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
PRPF8-205ENST00000572621 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
PRPF8-205ENST00000572621 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
PRPF8-205ENST00000572621 PHLDB1Q86UU1 1377 aa16.92■□□□□ 0.3
PRPF8-205ENST00000572621 TPM2P07951 284 aa16.91■□□□□ 0.3
PRPF8-205ENST00000572621 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
PRPF8-205ENST00000572621 COG6Q9Y2V7 657 aa16.91■□□□□ 0.3
PRPF8-205ENST00000572621 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
PRPF8-205ENST00000572621 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
PRPF8-205ENST00000572621 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
PRPF8-205ENST00000572621 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
PRPF8-205ENST00000572621 IPO7O95373 1038 aaKnown RBP16.9■□□□□ 0.3
PRPF8-205ENST00000572621 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
PRPF8-205ENST00000572621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.3
PRPF8-205ENST00000572621 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
PRPF8-205ENST00000572621 CALRP27797 417 aaKnown RBP16.9■□□□□ 0.3
PRPF8-205ENST00000572621 G3V3G9 751 aa16.89■□□□□ 0.29
PRPF8-205ENST00000572621 DCAF8Q5TAQ9 597 aa16.89■□□□□ 0.29
PRPF8-205ENST00000572621 SOGA1O94964 1423 aa16.89■□□□□ 0.29
PRPF8-205ENST00000572621 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
PRPF8-205ENST00000572621 AMPHP49418 695 aa16.88■□□□□ 0.29
PRPF8-205ENST00000572621 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
PRPF8-205ENST00000572621 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
PRPF8-205ENST00000572621 BICD2Q8TD16 824 aa16.87■□□□□ 0.29
PRPF8-205ENST00000572621 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
PRPF8-205ENST00000572621 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
PRPF8-205ENST00000572621 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
PRPF8-205ENST00000572621 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
PRPF8-205ENST00000572621 REC8O95072 547 aa16.86■□□□□ 0.29
PRPF8-205ENST00000572621 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
PRPF8-205ENST00000572621 CHMP4CQ96CF2 233 aa16.85■□□□□ 0.29
PRPF8-205ENST00000572621 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
PRPF8-205ENST00000572621 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
PRPF8-205ENST00000572621 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
PRPF8-205ENST00000572621 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
PRPF8-205ENST00000572621 PANK3Q9H999 370 aa16.84■□□□□ 0.29
PRPF8-205ENST00000572621 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
PRPF8-205ENST00000572621 SYNE3Q6ZMZ3 975 aa16.84■□□□□ 0.29
PRPF8-205ENST00000572621 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
PRPF8-205ENST00000572621 E9PSI1 815 aa16.84■□□□□ 0.29
PRPF8-205ENST00000572621 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
PRPF8-205ENST00000572621 ANKRD20A12PQ8NF67 263 aa16.83■□□□□ 0.29
PRPF8-205ENST00000572621 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
PRPF8-205ENST00000572621 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
PRPF8-205ENST00000572621 R3HCC1Q9Y3T6 440 aaKnown RBP16.83■□□□□ 0.28
PRPF8-205ENST00000572621 CUX2O14529 1486 aa16.83■□□□□ 0.28
PRPF8-205ENST00000572621 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.28
PRPF8-205ENST00000572621 TRIM29Q14134 588 aa16.83■□□□□ 0.28
PRPF8-205ENST00000572621 SASS6Q6UVJ0 657 aa16.82■□□□□ 0.28
PRPF8-205ENST00000572621 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
PRPF8-205ENST00000572621 RUFY1Q96T51 708 aa16.82■□□□□ 0.28
PRPF8-205ENST00000572621 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
PRPF8-205ENST00000572621 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms