RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 ADGRL1O94910 1474 aa6.76□□□□□ -1.33
NDE1-204ENST00000572503 NEO1Q92859 1461 aa6.76□□□□□ -1.33
NDE1-204ENST00000572503 DIP2BQ9P265 1576 aa6.76□□□□□ -1.33
NDE1-204ENST00000572503 RNF17Q9BXT8 1623 aaKnown RBP6.76□□□□□ -1.33
NDE1-204ENST00000572503 FRMPD1Q5SYB0 1578 aa6.75□□□□□ -1.33
NDE1-204ENST00000572503 PLA2R1Q13018 1463 aa6.75□□□□□ -1.33
NDE1-204ENST00000572503 TRIM52Q96A61 297 aa6.75□□□□□ -1.33
NDE1-204ENST00000572503 PRDM15P57071 1507 aaPredicted RBP6.75□□□□□ -1.33
NDE1-204ENST00000572503 CD109Q6YHK3 1445 aa6.75□□□□□ -1.33
NDE1-204ENST00000572503 POGZQ7Z3K3 1410 aa6.75□□□□□ -1.33
NDE1-204ENST00000572503 E9PCH4 1651 aa6.74□□□□□ -1.33
NDE1-204ENST00000572503 TET3O43151 1660 aa6.74□□□□□ -1.33
NDE1-204ENST00000572503 MLH3Q9UHC1 1453 aa6.74□□□□□ -1.33
NDE1-204ENST00000572503 TONSLQ96HA7 1378 aa6.74□□□□□ -1.33
NDE1-204ENST00000572503 SCAPERQ9BY12 1400 aa6.74□□□□□ -1.33
NDE1-204ENST00000572503 HECW2Q9P2P5 1572 aa6.74□□□□□ -1.33
NDE1-204ENST00000572503 KIF13AQ9H1H9 1805 aa6.73□□□□□ -1.33
NDE1-204ENST00000572503 ZNF518AQ6AHZ1 1483 aa6.73□□□□□ -1.33
NDE1-204ENST00000572503 NUP155O75694 1391 aa6.73□□□□□ -1.33
NDE1-204ENST00000572503 ABCA6Q8N139 1617 aa6.73□□□□□ -1.33
NDE1-204ENST00000572503 NEUROD1Q13562 356 aa6.73□□□□□ -1.33
NDE1-204ENST00000572503 SP7Q8TDD2 431 aaPredicted RBP6.73□□□□□ -1.33
NDE1-204ENST00000572503 SLC4A1APQ9BWU0 796 aaKnown RBP6.73□□□□□ -1.33
NDE1-204ENST00000572503 POLR1AO95602 1720 aaPredicted RBP6.73□□□□□ -1.33
NDE1-204ENST00000572503 ZMYM4Q5VZL5 1548 aa6.72□□□□□ -1.33
NDE1-204ENST00000572503 LMTK2Q8IWU2 1503 aa6.72□□□□□ -1.33
NDE1-204ENST00000572503 PKD2Q13563 968 aa6.72□□□□□ -1.33
NDE1-204ENST00000572503 DIEXFQ68CQ4 756 aaKnown RBP6.72□□□□□ -1.33
NDE1-204ENST00000572503 UHRF1BP1Q6BDS2 1440 aa6.72□□□□□ -1.33
NDE1-204ENST00000572503 SPHKAPQ2M3C7 1700 aa6.72□□□□□ -1.33
NDE1-204ENST00000572503 SPAG9O60271 1321 aaKnown RBP6.72□□□□□ -1.33
NDE1-204ENST00000572503 DIP2CQ9Y2E4 1556 aa6.71□□□□□ -1.34
NDE1-204ENST00000572503 NPM1P06748 294 aaKnown RBP eCLIP6.71□□□□□ -1.34
NDE1-204ENST00000572503 AFAP1Q8N556 730 aa6.71□□□□□ -1.34
NDE1-204ENST00000572503 TRPM2O94759 1503 aa6.71□□□□□ -1.34
NDE1-204ENST00000572503 DHX29Q7Z478 1369 aaKnown RBP6.7□□□□□ -1.34
NDE1-204ENST00000572503 CEP152O94986 1710 aa6.7□□□□□ -1.34
NDE1-204ENST00000572503 NEURL4Q96JN8 1562 aa6.7□□□□□ -1.34
NDE1-204ENST00000572503 PTPRTO14522 1441 aa6.7□□□□□ -1.34
NDE1-204ENST00000572503 L3MBTL2Q969R5 705 aa6.7□□□□□ -1.34
NDE1-204ENST00000572503 SPATA31E1Q6ZUB1 1445 aa6.69□□□□□ -1.34
NDE1-204ENST00000572503 RALGAPBQ86X10 1494 aa6.69□□□□□ -1.34
NDE1-204ENST00000572503 EFCAB6Q5THR3 1501 aa6.69□□□□□ -1.34
NDE1-204ENST00000572503 REREQ9P2R6 1566 aa6.69□□□□□ -1.34
NDE1-204ENST00000572503 LAMC1P11047 1609 aa6.68□□□□□ -1.34
NDE1-204ENST00000572503 CLTCL1P53675 1640 aa6.68□□□□□ -1.34
NDE1-204ENST00000572503 TRPM1Q7Z4N2 1603 aa6.68□□□□□ -1.34
NDE1-204ENST00000572503 A2MP01023 1474 aa6.68□□□□□ -1.34
NDE1-204ENST00000572503 NBPF8Q3BBV2 869 aa6.68□□□□□ -1.34
NDE1-204ENST00000572503 CYB5RLQ6IPT4 315 aa6.68□□□□□ -1.34
NDE1-204ENST00000572503 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
NDE1-204ENST00000572503 TSPOAP1O95153 1857 aa6.67□□□□□ -1.34
NDE1-204ENST00000572503 MAPK8IP2Q13387 824 aaPredicted RBP6.67□□□□□ -1.34
NDE1-204ENST00000572503 ZC3H13Q5T200 1668 aaKnown RBP6.66□□□□□ -1.34
NDE1-204ENST00000572503 SIGLEC1Q9BZZ2 1709 aa6.66□□□□□ -1.34
NDE1-204ENST00000572503 ABCC3O15438 1527 aa6.66□□□□□ -1.34
NDE1-204ENST00000572503 CAMSAP1Q5T5Y3 1602 aa6.65□□□□□ -1.34
NDE1-204ENST00000572503 CCDC144AA2RUR9 1427 aa6.65□□□□□ -1.35
NDE1-204ENST00000572503 PRAG1Q86YV5 1406 aa6.65□□□□□ -1.35
NDE1-204ENST00000572503 PIK3C2BO00750 1634 aa6.65□□□□□ -1.35
NDE1-204ENST00000572503 MADDQ8WXG6 1647 aa6.65□□□□□ -1.35
NDE1-204ENST00000572503 MROH2AA6NES4 1674 aa6.65□□□□□ -1.35
NDE1-204ENST00000572503 MIER1Q8N108 512 aa6.64□□□□□ -1.35
NDE1-204ENST00000572503 GPRASP1Q5JY77 1395 aa6.64□□□□□ -1.35
NDE1-204ENST00000572503 YEATS2Q9ULM3 1422 aa6.64□□□□□ -1.35
NDE1-204ENST00000572503 AGLP35573 1532 aa6.64□□□□□ -1.35
NDE1-204ENST00000572503 KIAA1210Q9ULL0 1709 aa6.64□□□□□ -1.35
NDE1-204ENST00000572503 KIF1BO60333 1816 aa6.64□□□□□ -1.35
NDE1-204ENST00000572503 ADGRB3O60242 1522 aa6.63□□□□□ -1.35
NDE1-204ENST00000572503 HSPA5P11021 654 aaKnown RBP6.63□□□□□ -1.35
NDE1-204ENST00000572503 ARHGEF40Q8TER5 1519 aa6.63□□□□□ -1.35
NDE1-204ENST00000572503 IQGAP1P46940 1657 aa6.62□□□□□ -1.35
NDE1-204ENST00000572503 SYNMO15061 1565 aa6.62□□□□□ -1.35
NDE1-204ENST00000572503 COL17A1Q9UMD9 1497 aaPredicted RBP6.62□□□□□ -1.35
NDE1-204ENST00000572503 NOS1P29475 1434 aa6.62□□□□□ -1.35
NDE1-204ENST00000572503 NPATQ14207 1427 aa6.62□□□□□ -1.35
NDE1-204ENST00000572503 ARHGAP31Q2M1Z3 1444 aa6.62□□□□□ -1.35
NDE1-204ENST00000572503 PPLO60437 1756 aa6.62□□□□□ -1.35
NDE1-204ENST00000572503 UGGT1Q9NYU2 1555 aa6.61□□□□□ -1.35
NDE1-204ENST00000572503 NRXN1Q9ULB1 1477 aa6.61□□□□□ -1.35
NDE1-204ENST00000572503 KANK1Q14678 1352 aa6.61□□□□□ -1.35
NDE1-204ENST00000572503 CFAP65Q6ZU64 1925 aaKnown RBP6.61□□□□□ -1.35
NDE1-204ENST00000572503 KIF3BO15066 747 aa6.61□□□□□ -1.35
NDE1-204ENST00000572503 RAPGEF3O95398 923 aa6.61□□□□□ -1.35
NDE1-204ENST00000572503 FAM69CQ0P6D2 419 aa6.61□□□□□ -1.35
NDE1-204ENST00000572503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.61□□□□□ -1.35
NDE1-204ENST00000572503 MYOM2P54296 1465 aa6.6□□□□□ -1.35
NDE1-204ENST00000572503 CCDC7Q96M83 1385 aa6.6□□□□□ -1.35
NDE1-204ENST00000572503 WASHC2AQ641Q2 1341 aa6.6□□□□□ -1.35
NDE1-204ENST00000572503 EIF4G2P78344 907 aaKnown RBP eCLIP6.6□□□□□ -1.35
NDE1-204ENST00000572503 PREX1Q8TCU6 1659 aa6.6□□□□□ -1.35
NDE1-204ENST00000572503 CNTLNQ9NXG0 1405 aa6.59□□□□□ -1.35
NDE1-204ENST00000572503 USP47Q96K76 1375 aa6.59□□□□□ -1.35
NDE1-204ENST00000572503 C11orf95C9JLR9 678 aaPredicted RBP6.59□□□□□ -1.35
NDE1-204ENST00000572503 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
NDE1-204ENST00000572503 MYO5BQ9ULV0 1848 aa6.58□□□□□ -1.36
NDE1-204ENST00000572503 DCAF8L1A6NGE4 600 aa6.57□□□□□ -1.36
NDE1-204ENST00000572503 DDX10Q13206 875 aaKnown RBP6.57□□□□□ -1.36
NDE1-204ENST00000572503 MYO3AQ8NEV4 1616 aa6.57□□□□□ -1.36
NDE1-204ENST00000572503 NEXMIFQ5QGS0 1516 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms