RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.35
USP43-203ENST00000570827 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
USP43-203ENST00000570827 MS4A1P11836 297 aa12.88□□□□□ -0.35
USP43-203ENST00000570827 BECN1Q14457 450 aa12.88□□□□□ -0.35
USP43-203ENST00000570827 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
USP43-203ENST00000570827 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
USP43-203ENST00000570827 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
USP43-203ENST00000570827 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
USP43-203ENST00000570827 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
USP43-203ENST00000570827 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
USP43-203ENST00000570827 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
USP43-203ENST00000570827 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
USP43-203ENST00000570827 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
USP43-203ENST00000570827 TMF1P82094 1093 aa12.86□□□□□ -0.35
USP43-203ENST00000570827 BCL2L13Q9BXK5 485 aa12.85□□□□□ -0.35
USP43-203ENST00000570827 ANKRD30BQ9BXX2 1392 aa12.85□□□□□ -0.35
USP43-203ENST00000570827 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
USP43-203ENST00000570827 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
USP43-203ENST00000570827 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
USP43-203ENST00000570827 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
USP43-203ENST00000570827 ADAMTS12P58397 1594 aa12.83□□□□□ -0.36
USP43-203ENST00000570827 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
USP43-203ENST00000570827 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
USP43-203ENST00000570827 CENPQQ7L2Z9 268 aaPredicted RBP12.82□□□□□ -0.36
USP43-203ENST00000570827 APAF1O14727 1248 aa12.82□□□□□ -0.36
USP43-203ENST00000570827 GGT6Q6P531 493 aa12.82□□□□□ -0.36
USP43-203ENST00000570827 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
USP43-203ENST00000570827 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
USP43-203ENST00000570827 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
USP43-203ENST00000570827 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
USP43-203ENST00000570827 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
USP43-203ENST00000570827 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
USP43-203ENST00000570827 BRD4O60885 1362 aaPredicted RBP12.8□□□□□ -0.36
USP43-203ENST00000570827 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
USP43-203ENST00000570827 BCAR3O75815 825 aa12.79□□□□□ -0.36
USP43-203ENST00000570827 KDM6BO15054 1643 aa12.79□□□□□ -0.36
USP43-203ENST00000570827 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
USP43-203ENST00000570827 MIA2Q96PC5 1412 aa12.78□□□□□ -0.36
USP43-203ENST00000570827 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
USP43-203ENST00000570827 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
USP43-203ENST00000570827 POGKQ9P215 609 aa12.77□□□□□ -0.36
USP43-203ENST00000570827 DISP1Q96F81 1524 aa12.77□□□□□ -0.36
USP43-203ENST00000570827 NUP153P49790 1475 aaKnown RBP12.77□□□□□ -0.36
USP43-203ENST00000570827 STK26Q9P289 416 aa12.77□□□□□ -0.36
USP43-203ENST00000570827 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.37
USP43-203ENST00000570827 DHX29Q7Z478 1369 aaKnown RBP12.77□□□□□ -0.37
USP43-203ENST00000570827 EIF4G3O43432 1585 aaKnown RBP12.76□□□□□ -0.37
USP43-203ENST00000570827 CARMIL2Q6F5E8 1435 aa12.76□□□□□ -0.37
USP43-203ENST00000570827 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
USP43-203ENST00000570827 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
USP43-203ENST00000570827 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
USP43-203ENST00000570827 KIF3BO15066 747 aa12.76□□□□□ -0.37
USP43-203ENST00000570827 RPRD2Q5VT52 1461 aaKnown RBP12.75□□□□□ -0.37
USP43-203ENST00000570827 WDR62O43379 1518 aa12.75□□□□□ -0.37
USP43-203ENST00000570827 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
USP43-203ENST00000570827 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
USP43-203ENST00000570827 DAPK1P53355 1430 aa12.75□□□□□ -0.37
USP43-203ENST00000570827 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
USP43-203ENST00000570827 ABCC5O15440 1437 aa12.74□□□□□ -0.37
USP43-203ENST00000570827 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
USP43-203ENST00000570827 MLECQ14165 292 aa12.73□□□□□ -0.37
USP43-203ENST00000570827 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
USP43-203ENST00000570827 ARID3AQ99856 593 aa12.73□□□□□ -0.37
USP43-203ENST00000570827 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
USP43-203ENST00000570827 KIAA0556O60303 1618 aa12.72□□□□□ -0.37
USP43-203ENST00000570827 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
USP43-203ENST00000570827 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
USP43-203ENST00000570827 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
USP43-203ENST00000570827 DENND4BO75064 1496 aaPredicted RBP12.71□□□□□ -0.37
USP43-203ENST00000570827 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
USP43-203ENST00000570827 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
USP43-203ENST00000570827 L1TD1Q5T7N2 865 aaKnown RBP12.71□□□□□ -0.37
USP43-203ENST00000570827 CENPJQ9HC77 1338 aaPredicted RBP12.71□□□□□ -0.37
USP43-203ENST00000570827 SYNJ2O15056 1496 aa12.71□□□□□ -0.38
USP43-203ENST00000570827 SOX12O15370 315 aa12.71□□□□□ -0.38
USP43-203ENST00000570827 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.38
USP43-203ENST00000570827 ROCK1Q13464 1354 aa12.71□□□□□ -0.38
USP43-203ENST00000570827 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
USP43-203ENST00000570827 TROQ12816 1431 aaPredicted RBP12.7□□□□□ -0.38
USP43-203ENST00000570827 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
USP43-203ENST00000570827 CCDC144AA2RUR9 1427 aa12.69□□□□□ -0.38
USP43-203ENST00000570827 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
USP43-203ENST00000570827 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
USP43-203ENST00000570827 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
USP43-203ENST00000570827 PTPRGP23470 1445 aa12.69□□□□□ -0.38
USP43-203ENST00000570827 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
USP43-203ENST00000570827 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
USP43-203ENST00000570827 RAPGEF6Q8TEU7 1601 aa12.68□□□□□ -0.38
USP43-203ENST00000570827 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
USP43-203ENST00000570827 CEP170Q5SW79 1584 aa12.68□□□□□ -0.38
USP43-203ENST00000570827 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
USP43-203ENST00000570827 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
USP43-203ENST00000570827 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
USP43-203ENST00000570827 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP43-203ENST00000570827 CAMSAP2Q08AD1 1489 aa12.66□□□□□ -0.38
USP43-203ENST00000570827 C8orf34Q49A92 452 aa12.66□□□□□ -0.38
USP43-203ENST00000570827 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
USP43-203ENST00000570827 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
USP43-203ENST00000570827 IGHDP01880 384 aa12.65□□□□□ -0.38
USP43-203ENST00000570827 SEC24BO95487 1268 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms