RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
TCF4-246ENST00000570287 TRAIPQ9BWF2 469 aa11.2□□□□□ -0.62
TCF4-246ENST00000570287 TRAK2O60296 914 aa11.2□□□□□ -0.62
TCF4-246ENST00000570287 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
TCF4-246ENST00000570287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.19□□□□□ -0.62
TCF4-246ENST00000570287 ZFP91Q96JP5 570 aaPredicted RBP11.19□□□□□ -0.62
TCF4-246ENST00000570287 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
TCF4-246ENST00000570287 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
TCF4-246ENST00000570287 KIAA0586Q9BVV6 1533 aa11.19□□□□□ -0.62
TCF4-246ENST00000570287 EPRSP07814 1512 aaKnown RBP11.18□□□□□ -0.62
TCF4-246ENST00000570287 EIF4G3O43432 1585 aaKnown RBP11.18□□□□□ -0.62
TCF4-246ENST00000570287 PTPN23Q9H3S7 1636 aa11.18□□□□□ -0.62
TCF4-246ENST00000570287 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
TCF4-246ENST00000570287 PTPRKQ15262 1439 aa11.17□□□□□ -0.62
TCF4-246ENST00000570287 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
TCF4-246ENST00000570287 TCOF1Q13428 1488 aaKnown RBP11.17□□□□□ -0.62
TCF4-246ENST00000570287 ERCC6Q03468 1493 aa11.16□□□□□ -0.62
TCF4-246ENST00000570287 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
TCF4-246ENST00000570287 PDE4DQ08499 809 aa11.16□□□□□ -0.62
TCF4-246ENST00000570287 AK7Q96M32 723 aa11.16□□□□□ -0.62
TCF4-246ENST00000570287 KIAA0556O60303 1618 aa11.15□□□□□ -0.62
TCF4-246ENST00000570287 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
TCF4-246ENST00000570287 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.63
TCF4-246ENST00000570287 UACAQ9BZF9 1416 aa11.15□□□□□ -0.63
TCF4-246ENST00000570287 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
TCF4-246ENST00000570287 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
TCF4-246ENST00000570287 NAIPQ13075 1403 aa11.14□□□□□ -0.63
TCF4-246ENST00000570287 SIN3AQ96ST3 1273 aa11.14□□□□□ -0.63
TCF4-246ENST00000570287 MIA2Q96PC5 1412 aa11.13□□□□□ -0.63
TCF4-246ENST00000570287 CDK13Q14004 1512 aaKnown RBP11.13□□□□□ -0.63
TCF4-246ENST00000570287 TRIM66O15016 1216 aa11.12□□□□□ -0.63
TCF4-246ENST00000570287 PKNOX2Q96KN3 472 aa11.12□□□□□ -0.63
TCF4-246ENST00000570287 RBM19Q9Y4C8 960 aaKnown RBP11.12□□□□□ -0.63
TCF4-246ENST00000570287 AKNAQ7Z591 1439 aa11.11□□□□□ -0.63
TCF4-246ENST00000570287 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
TCF4-246ENST00000570287 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
TCF4-246ENST00000570287 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
TCF4-246ENST00000570287 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
TCF4-246ENST00000570287 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
TCF4-246ENST00000570287 RAPGEF6Q8TEU7 1601 aa11.1□□□□□ -0.63
TCF4-246ENST00000570287 E9PSI1 815 aa11.09□□□□□ -0.63
TCF4-246ENST00000570287 POM121Q96HA1 1249 aa11.09□□□□□ -0.63
TCF4-246ENST00000570287 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
TCF4-246ENST00000570287 NUP153P49790 1475 aaKnown RBP11.08□□□□□ -0.64
TCF4-246ENST00000570287 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
TCF4-246ENST00000570287 VGFO15240 615 aaPredicted RBP11.08□□□□□ -0.64
TCF4-246ENST00000570287 CEP170Q5SW79 1584 aa11.08□□□□□ -0.64
TCF4-246ENST00000570287 E2F4Q16254 413 aa11.07□□□□□ -0.64
TCF4-246ENST00000570287 FAM177A1Q8N128 213 aaPredicted RBP11.07□□□□□ -0.64
TCF4-246ENST00000570287 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
TCF4-246ENST00000570287 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
TCF4-246ENST00000570287 NUP160Q12769 1436 aa11.06□□□□□ -0.64
TCF4-246ENST00000570287 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
TCF4-246ENST00000570287 FANCIQ9NVI1 1328 aa11.05□□□□□ -0.64
TCF4-246ENST00000570287 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
TCF4-246ENST00000570287 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
TCF4-246ENST00000570287 FLIIQ13045 1269 aa11.04□□□□□ -0.64
TCF4-246ENST00000570287 POLR3GLQ9BT43 218 aa11.04□□□□□ -0.64
TCF4-246ENST00000570287 CARMIL2Q6F5E8 1435 aa11.03□□□□□ -0.64
TCF4-246ENST00000570287 RRP7BPQ9NSQ0 103 aa11.03□□□□□ -0.64
TCF4-246ENST00000570287 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
TCF4-246ENST00000570287 DCAF8Q5TAQ9 597 aa11.02□□□□□ -0.64
TCF4-246ENST00000570287 CHIC2Q9UKJ5 165 aa11.02□□□□□ -0.64
TCF4-246ENST00000570287 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.65
TCF4-246ENST00000570287 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.65
TCF4-246ENST00000570287 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.65
TCF4-246ENST00000570287 DAPK1P53355 1430 aa11.02□□□□□ -0.65
TCF4-246ENST00000570287 A6NJR5 290 aa11.02□□□□□ -0.65
TCF4-246ENST00000570287 NUBP1P53384 320 aa11.01□□□□□ -0.65
TCF4-246ENST00000570287 ADCY10Q96PN6 1610 aa11.01□□□□□ -0.65
TCF4-246ENST00000570287 JPH4Q96JJ6 628 aa11□□□□□ -0.65
TCF4-246ENST00000570287 KDM6BO15054 1643 aa11□□□□□ -0.65
TCF4-246ENST00000570287 CARNS1A5YM72 827 aa11□□□□□ -0.65
TCF4-246ENST00000570287 ABCC5O15440 1437 aa11□□□□□ -0.65
TCF4-246ENST00000570287 PLB1Q6P1J6 1458 aa11□□□□□ -0.65
TCF4-246ENST00000570287 ITSN2Q9NZM3 1697 aa11□□□□□ -0.65
TCF4-246ENST00000570287 DENND4BO75064 1496 aaPredicted RBP10.99□□□□□ -0.65
TCF4-246ENST00000570287 PRG4Q92954 1404 aaPredicted RBP10.98□□□□□ -0.65
TCF4-246ENST00000570287 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
TCF4-246ENST00000570287 KDM5BQ9UGL1 1544 aa10.98□□□□□ -0.65
TCF4-246ENST00000570287 MCM6Q14566 821 aa10.98□□□□□ -0.65
TCF4-246ENST00000570287 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
TCF4-246ENST00000570287 GSE1Q14687 1217 aa10.98□□□□□ -0.65
TCF4-246ENST00000570287 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
TCF4-246ENST00000570287 MPHOSPH9Q99550 1183 aa10.97□□□□□ -0.65
TCF4-246ENST00000570287 ABCA8O94911 1581 aa10.97□□□□□ -0.65
TCF4-246ENST00000570287 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.65
TCF4-246ENST00000570287 PPP1R37O75864 691 aa10.96□□□□□ -0.66
TCF4-246ENST00000570287 GPATCH8Q9UKJ3 1502 aaKnown RBP10.96□□□□□ -0.66
TCF4-246ENST00000570287 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.66
TCF4-246ENST00000570287 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.66
TCF4-246ENST00000570287 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
TCF4-246ENST00000570287 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
TCF4-246ENST00000570287 PDE4CQ08493 712 aa10.95□□□□□ -0.66
TCF4-246ENST00000570287 KIF14Q15058 1648 aa10.95□□□□□ -0.66
TCF4-246ENST00000570287 PROSER2Q86WR7 435 aaPredicted RBP10.94□□□□□ -0.66
TCF4-246ENST00000570287 CFDP1Q9UEE9 299 aaPredicted RBP10.94□□□□□ -0.66
TCF4-246ENST00000570287 ADGBQ8N7X0 1667 aa10.94□□□□□ -0.66
TCF4-246ENST00000570287 UNCXA6NJT0 531 aa10.93□□□□□ -0.66
TCF4-246ENST00000570287 FNBP4Q8N3X1 1017 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms