RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
PDXDC1-217ENST00000570001 ADGBQ8N7X0 1667 aa15.59■□□□□ 0.09
PDXDC1-217ENST00000570001 CYB5RLQ6IPT4 315 aa15.59■□□□□ 0.09
PDXDC1-217ENST00000570001 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
PDXDC1-217ENST00000570001 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.09
PDXDC1-217ENST00000570001 ADCY10Q96PN6 1610 aa15.56■□□□□ 0.08
PDXDC1-217ENST00000570001 EIF3AQ14152 1382 aaKnown RBP15.56■□□□□ 0.08
PDXDC1-217ENST00000570001 TEX14Q8IWB6 1497 aa15.55■□□□□ 0.08
PDXDC1-217ENST00000570001 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
PDXDC1-217ENST00000570001 FAM135AQ9P2D6 1515 aa15.54■□□□□ 0.08
PDXDC1-217ENST00000570001 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
PDXDC1-217ENST00000570001 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
PDXDC1-217ENST00000570001 FANCAO15360 1455 aa15.54■□□□□ 0.08
PDXDC1-217ENST00000570001 PANK3Q9H999 370 aa15.53■□□□□ 0.08
PDXDC1-217ENST00000570001 ADGRL1O94910 1474 aa15.53■□□□□ 0.08
PDXDC1-217ENST00000570001 MBD5Q9P267 1494 aa15.53■□□□□ 0.08
PDXDC1-217ENST00000570001 ARHGEF5Q12774 1597 aa15.52■□□□□ 0.08
PDXDC1-217ENST00000570001 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.08
PDXDC1-217ENST00000570001 CCDC184Q52MB2 194 aa15.52■□□□□ 0.08
PDXDC1-217ENST00000570001 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.08
PDXDC1-217ENST00000570001 ZBED9Q6R2W3 1325 aa15.52■□□□□ 0.08
PDXDC1-217ENST00000570001 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.07
PDXDC1-217ENST00000570001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.072e-7■■■■■ 47.7
PDXDC1-217ENST00000570001 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
PDXDC1-217ENST00000570001 CDC42BPAQ5VT25 1732 aa15.51■□□□□ 0.07
PDXDC1-217ENST00000570001 ERBINQ96RT1 1412 aa15.5■□□□□ 0.07
PDXDC1-217ENST00000570001 PPP4R2Q9NY27 417 aa15.5■□□□□ 0.07
PDXDC1-217ENST00000570001 ERCC6L2Q5T890 1561 aa15.5■□□□□ 0.07
PDXDC1-217ENST00000570001 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
PDXDC1-217ENST00000570001 SAMD9LQ8IVG5 1584 aa15.49■□□□□ 0.07
PDXDC1-217ENST00000570001 ASXL2Q76L83 1435 aa15.48■□□□□ 0.07
PDXDC1-217ENST00000570001 RALGAPBQ86X10 1494 aa15.48■□□□□ 0.07
PDXDC1-217ENST00000570001 CD109Q6YHK3 1445 aa15.47■□□□□ 0.07
PDXDC1-217ENST00000570001 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
PDXDC1-217ENST00000570001 TTC37Q6PGP7 1564 aa15.47■□□□□ 0.07
PDXDC1-217ENST00000570001 MLECQ14165 292 aa15.47■□□□□ 0.07
PDXDC1-217ENST00000570001 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.07
PDXDC1-217ENST00000570001 MYO5CQ9NQX4 1742 aa15.45■□□□□ 0.06
PDXDC1-217ENST00000570001 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
PDXDC1-217ENST00000570001 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
PDXDC1-217ENST00000570001 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
PDXDC1-217ENST00000570001 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
PDXDC1-217ENST00000570001 RAPGEF3O95398 923 aa15.44■□□□□ 0.06
PDXDC1-217ENST00000570001 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
PDXDC1-217ENST00000570001 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
PDXDC1-217ENST00000570001 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
PDXDC1-217ENST00000570001 ERICH6BQ5W0A0 696 aa15.44■□□□□ 0.06
PDXDC1-217ENST00000570001 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
PDXDC1-217ENST00000570001 POGKQ9P215 609 aa15.43■□□□□ 0.06
PDXDC1-217ENST00000570001 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDXDC1-217ENST00000570001 CFAP70Q5T0N1 1121 aa15.42■□□□□ 0.06
PDXDC1-217ENST00000570001 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
PDXDC1-217ENST00000570001 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
PDXDC1-217ENST00000570001 DHX29Q7Z478 1369 aaKnown RBP15.42■□□□□ 0.06
PDXDC1-217ENST00000570001 STK26Q9P289 416 aa15.42■□□□□ 0.06
PDXDC1-217ENST00000570001 UHRF1BP1Q6BDS2 1440 aa15.41■□□□□ 0.06
PDXDC1-217ENST00000570001 CROCC2H7BZ55 1655 aa15.41■□□□□ 0.06
PDXDC1-217ENST00000570001 BRD4O60885 1362 aaPredicted RBP15.41■□□□□ 0.06
PDXDC1-217ENST00000570001 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
PDXDC1-217ENST00000570001 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
PDXDC1-217ENST00000570001 MYT1Q01538 1121 aa15.4■□□□□ 0.06
PDXDC1-217ENST00000570001 ZCCHC11Q5TAX3 1644 aaKnown RBP15.4■□□□□ 0.06
PDXDC1-217ENST00000570001 VGFO15240 615 aaPredicted RBP15.4■□□□□ 0.06
PDXDC1-217ENST00000570001 NEFMP07197 916 aa15.4■□□□□ 0.06
PDXDC1-217ENST00000570001 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
PDXDC1-217ENST00000570001 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
PDXDC1-217ENST00000570001 MORC1Q86VD1 984 aa15.38■□□□□ 0.05
PDXDC1-217ENST00000570001 SRPK2P78362 688 aaKnown RBP15.38■□□□□ 0.05
PDXDC1-217ENST00000570001 SPATA31E1Q6ZUB1 1445 aa15.38■□□□□ 0.05
PDXDC1-217ENST00000570001 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
PDXDC1-217ENST00000570001 TSHZ2Q9NRE2 1034 aa15.36■□□□□ 0.05
PDXDC1-217ENST00000570001 CDC42BPBQ9Y5S2 1711 aa15.36■□□□□ 0.05
PDXDC1-217ENST00000570001 CENPJQ9HC77 1338 aaPredicted RBP15.35■□□□□ 0.05
PDXDC1-217ENST00000570001 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
PDXDC1-217ENST00000570001 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
PDXDC1-217ENST00000570001 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
PDXDC1-217ENST00000570001 ZNF518AQ6AHZ1 1483 aa15.35■□□□□ 0.05
PDXDC1-217ENST00000570001 PDE3BQ13370 1112 aa15.34■□□□□ 0.05
PDXDC1-217ENST00000570001 MAST1Q9Y2H9 1570 aa15.34■□□□□ 0.05
PDXDC1-217ENST00000570001 ABCC1P33527 1531 aa15.33■□□□□ 0.05
PDXDC1-217ENST00000570001 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.05
PDXDC1-217ENST00000570001 A2MP01023 1474 aa15.33■□□□□ 0.04
PDXDC1-217ENST00000570001 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
PDXDC1-217ENST00000570001 NEUROD2Q15784 382 aa15.32■□□□□ 0.04
PDXDC1-217ENST00000570001 ATP7AQ04656 1500 aa15.32■□□□□ 0.04
PDXDC1-217ENST00000570001 DISP3Q9P2K9 1392 aa15.31■□□□□ 0.04
PDXDC1-217ENST00000570001 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
PDXDC1-217ENST00000570001 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
PDXDC1-217ENST00000570001 EVC2Q86UK5 1308 aa15.29■□□□□ 0.04
PDXDC1-217ENST00000570001 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
PDXDC1-217ENST00000570001 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
PDXDC1-217ENST00000570001 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
PDXDC1-217ENST00000570001 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
PDXDC1-217ENST00000570001 SCAF11Q99590 1463 aaKnown RBP15.28■□□□□ 0.04
PDXDC1-217ENST00000570001 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
PDXDC1-217ENST00000570001 TESK2Q96S53 571 aa15.27■□□□□ 0.04
PDXDC1-217ENST00000570001 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.03
PDXDC1-217ENST00000570001 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
PDXDC1-217ENST00000570001 PPP2R1AP30153 589 aa15.26■□□□□ 0.03
PDXDC1-217ENST00000570001 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms