RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PROX2Q3B8N5 592 aa14.42□□□□□ -0.1
CHD9-220ENST00000569794 RABGEF1Q9UJ41 708 aa14.4□□□□□ -0.1
CHD9-220ENST00000569794 EPAS1Q99814 870 aa14.38□□□□□ -0.11
CHD9-220ENST00000569794 C6orf132Q5T0Z8 1188 aa14.34□□□□□ -0.11
CHD9-220ENST00000569794 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
CHD9-220ENST00000569794 LAPTM4BQ86VI4 370 aa14.31□□□□□ -0.12
CHD9-220ENST00000569794 ANKK1Q8NFD2 765 aa14.31□□□□□ -0.12
CHD9-220ENST00000569794 DDX12PQ92771 950 aa14.31□□□□□ -0.12
CHD9-220ENST00000569794 KIAA1468Q9P260 1216 aa14.31□□□□□ -0.12
CHD9-220ENST00000569794 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
CHD9-220ENST00000569794 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
CHD9-220ENST00000569794 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
CHD9-220ENST00000569794 PDIA6Q15084 440 aa14.26□□□□□ -0.13
CHD9-220ENST00000569794 BCAMP50895 628 aa14.25□□□□□ -0.13
CHD9-220ENST00000569794 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.25□□□□□ -0.13
CHD9-220ENST00000569794 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
CHD9-220ENST00000569794 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
CHD9-220ENST00000569794 ZFRQ96KR1 1074 aaKnown RBP14.24□□□□□ -0.13
CHD9-220ENST00000569794 A0A0G2JS52 829 aa14.23□□□□□ -0.13
CHD9-220ENST00000569794 SEPT9Q9UHD8 586 aaPredicted RBP14.23□□□□□ -0.13
CHD9-220ENST00000569794 NBR1Q14596 966 aa14.22□□□□□ -0.13
CHD9-220ENST00000569794 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
CHD9-220ENST00000569794 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.13
CHD9-220ENST00000569794 RGS20O76081 388 aa14.21□□□□□ -0.13
CHD9-220ENST00000569794 EN1Q05925 392 aaPredicted RBP14.21□□□□□ -0.13
CHD9-220ENST00000569794 MAP3K7O43318 606 aa14.18□□□□□ -0.14
CHD9-220ENST00000569794 E2F4Q16254 413 aa14.18□□□□□ -0.14
CHD9-220ENST00000569794 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
CHD9-220ENST00000569794 TSR1Q2NL82 804 aaKnown RBP14.18□□□□□ -0.14
CHD9-220ENST00000569794 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
CHD9-220ENST00000569794 NYAP1Q6ZVC0 841 aa14.16□□□□□ -0.14
CHD9-220ENST00000569794 WBP1LQ9NX94 342 aa14.15□□□□□ -0.14
CHD9-220ENST00000569794 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
CHD9-220ENST00000569794 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
CHD9-220ENST00000569794 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
CHD9-220ENST00000569794 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
CHD9-220ENST00000569794 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
CHD9-220ENST00000569794 PACS2Q86VP3 889 aa14.11□□□□□ -0.15
CHD9-220ENST00000569794 LRCH3Q96II8 777 aa14.1□□□□□ -0.15
CHD9-220ENST00000569794 WDR70Q9NW82 654 aa14.1□□□□□ -0.15
CHD9-220ENST00000569794 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.1□□□□□ -0.15
CHD9-220ENST00000569794 PRIM1P49642 420 aaKnown RBP14.09□□□□□ -0.15
CHD9-220ENST00000569794 TSR3Q9UJK0 312 aaKnown RBP14.08□□□□□ -0.16
CHD9-220ENST00000569794 CDCA7LQ96GN5 454 aa14.07□□□□□ -0.16
CHD9-220ENST00000569794 HPS5Q9UPZ3 1129 aa14.07□□□□□ -0.16
CHD9-220ENST00000569794 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
CHD9-220ENST00000569794 PRSS12P56730 875 aa14.05□□□□□ -0.16
CHD9-220ENST00000569794 CERKQ8TCT0 537 aa14.04□□□□□ -0.16
CHD9-220ENST00000569794 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
CHD9-220ENST00000569794 KCNC4Q03721 635 aa14.03□□□□□ -0.16
CHD9-220ENST00000569794 IRX2Q9BZI1 471 aaPredicted RBP14.02□□□□□ -0.17
CHD9-220ENST00000569794 SMAPO00193 183 aa14.01□□□□□ -0.17
CHD9-220ENST00000569794 OSBPP22059 807 aa14.01□□□□□ -0.17
CHD9-220ENST00000569794 C3orf80F5H4A9 247 aa13.99□□□□□ -0.17
CHD9-220ENST00000569794 PPP4CP60510 307 aa13.97□□□□□ -0.17
CHD9-220ENST00000569794 SAMD7Q7Z3H4 446 aa13.97□□□□□ -0.17
CHD9-220ENST00000569794 CDHR5Q9HBB8 845 aa13.97□□□□□ -0.17
CHD9-220ENST00000569794 NBPF26B4DH59 902 aa13.96□□□□□ -0.17
CHD9-220ENST00000569794 TATDN2Q93075 761 aa13.96□□□□□ -0.17
CHD9-220ENST00000569794 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
CHD9-220ENST00000569794 RBM27Q9P2N5 1060 aaKnown RBP13.94□□□□□ -0.18
CHD9-220ENST00000569794 NUDT18Q6ZVK8 323 aa13.9□□□□□ -0.18
CHD9-220ENST00000569794 TJAP1Q5JTD0 557 aa13.88□□□□□ -0.19
CHD9-220ENST00000569794 TTC13Q8NBP0 860 aa13.88□□□□□ -0.19
CHD9-220ENST00000569794 NPDC1Q9NQX5 325 aaPredicted RBP13.88□□□□□ -0.19
CHD9-220ENST00000569794 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
CHD9-220ENST00000569794 PADI6Q6TGC4 694 aa13.83□□□□□ -0.2
CHD9-220ENST00000569794 MTRQ99707 1265 aa13.83□□□□□ -0.2
CHD9-220ENST00000569794 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
CHD9-220ENST00000569794 RNF40O75150 1001 aa13.81□□□□□ -0.2
CHD9-220ENST00000569794 IL21Q9HBE4 155 aa13.81□□□□□ -0.2
CHD9-220ENST00000569794 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
CHD9-220ENST00000569794 APLP1P51693 650 aa13.79□□□□□ -0.2
CHD9-220ENST00000569794 MLLT3P42568 568 aaPredicted RBP13.78□□□□□ -0.2
CHD9-220ENST00000569794 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
CHD9-220ENST00000569794 KCNV2Q8TDN2 545 aa13.76□□□□□ -0.21
CHD9-220ENST00000569794 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
CHD9-220ENST00000569794 EYA1Q99502 592 aa13.75□□□□□ -0.21
CHD9-220ENST00000569794 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
CHD9-220ENST00000569794 NECTIN2Q92692 538 aa13.74□□□□□ -0.21
CHD9-220ENST00000569794 Q6ZNB5 142 aa13.73□□□□□ -0.21
CHD9-220ENST00000569794 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
CHD9-220ENST00000569794 PTGDRQ13258 359 aa13.68□□□□□ -0.22
CHD9-220ENST00000569794 LAPTM4AQ15012 233 aa13.68□□□□□ -0.22
CHD9-220ENST00000569794 PRKD2Q9BZL6 878 aa13.68□□□□□ -0.22
CHD9-220ENST00000569794 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
CHD9-220ENST00000569794 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
CHD9-220ENST00000569794 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
CHD9-220ENST00000569794 COPS2P61201 443 aa13.65□□□□□ -0.22
CHD9-220ENST00000569794 GFRA3O60609 400 aa13.63□□□□□ -0.23
CHD9-220ENST00000569794 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
CHD9-220ENST00000569794 DNAJB2P25686 324 aa13.62□□□□□ -0.23
CHD9-220ENST00000569794 PRR14Q9BWN1 585 aa13.61□□□□□ -0.23
CHD9-220ENST00000569794 ADGRG1Q9Y653 693 aa13.61□□□□□ -0.23
CHD9-220ENST00000569794 RBM46Q8TBY0 533 aaKnown RBP13.6□□□□□ -0.23
CHD9-220ENST00000569794 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
CHD9-220ENST00000569794 ZPR1O75312 459 aa13.59□□□□□ -0.23
CHD9-220ENST00000569794 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
CHD9-220ENST00000569794 GGCXP38435 758 aa13.58□□□□□ -0.24
CHD9-220ENST00000569794 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms