RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
SCRT1-201ENST00000569446 CLUAP1Q96AJ1 413 aa26.68■■□□□ 1.86
SCRT1-201ENST00000569446 C9orf84Q5VXU9 1444 aa26.67■■□□□ 1.86
SCRT1-201ENST00000569446 APAF1O14727 1248 aa26.67■■□□□ 1.86
SCRT1-201ENST00000569446 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
SCRT1-201ENST00000569446 TRAK1Q9UPV9 953 aa26.66■■□□□ 1.86
SCRT1-201ENST00000569446 STK26Q9P289 416 aa26.65■■□□□ 1.86
SCRT1-201ENST00000569446 C20orf194Q5TEA3 1177 aa26.64■■□□□ 1.86
SCRT1-201ENST00000569446 SPRYD3Q8NCJ5 442 aa26.64■■□□□ 1.85
SCRT1-201ENST00000569446 CAMSAP2Q08AD1 1489 aa26.64■■□□□ 1.85
SCRT1-201ENST00000569446 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
SCRT1-201ENST00000569446 KIAA0586Q9BVV6 1533 aa26.61■■□□□ 1.85
SCRT1-201ENST00000569446 SPAG9O60271 1321 aaKnown RBP26.61■■□□□ 1.85
SCRT1-201ENST00000569446 NPM1P06748 294 aaKnown RBP eCLIP26.6■■□□□ 1.85
SCRT1-201ENST00000569446 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
SCRT1-201ENST00000569446 CTTNBP2Q8WZ74 1663 aa26.6■■□□□ 1.85
SCRT1-201ENST00000569446 ROCK1Q13464 1354 aa26.6■■□□□ 1.85
SCRT1-201ENST00000569446 U2SURPO15042 1029 aaKnown RBP26.6■■□□□ 1.85
SCRT1-201ENST00000569446 STAG3Q9UJ98 1225 aa26.59■■□□□ 1.85
SCRT1-201ENST00000569446 TCERG1O14776 1098 aaKnown RBP26.59■■□□□ 1.85
SCRT1-201ENST00000569446 GOLGA2Q08379 1002 aa26.59■■□□□ 1.85
SCRT1-201ENST00000569446 CDCA8Q53HL2 280 aa26.57■■□□□ 1.84
SCRT1-201ENST00000569446 MORC1Q86VD1 984 aa26.56■■□□□ 1.84
SCRT1-201ENST00000569446 EIF5BO60841 1220 aaKnown RBP26.55■■□□□ 1.84
SCRT1-201ENST00000569446 CFAP70Q5T0N1 1121 aa26.55■■□□□ 1.84
SCRT1-201ENST00000569446 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
SCRT1-201ENST00000569446 SMG6Q86US8 1419 aaKnown RBP26.54■■□□□ 1.84
SCRT1-201ENST00000569446 GPATCH8Q9UKJ3 1502 aaKnown RBP26.53■■□□□ 1.84
SCRT1-201ENST00000569446 SLC24A1O60721 1099 aa26.52■■□□□ 1.84
SCRT1-201ENST00000569446 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
SCRT1-201ENST00000569446 SLKQ9H2G2 1235 aaPredicted RBP26.5■■□□□ 1.83
SCRT1-201ENST00000569446 COG6Q9Y2V7 657 aa26.5■■□□□ 1.83
SCRT1-201ENST00000569446 BRD4O60885 1362 aaPredicted RBP26.5■■□□□ 1.83
SCRT1-201ENST00000569446 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
SCRT1-201ENST00000569446 DHX29Q7Z478 1369 aaKnown RBP26.49■■□□□ 1.83
SCRT1-201ENST00000569446 PDE3BQ13370 1112 aa26.49■■□□□ 1.83
SCRT1-201ENST00000569446 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
SCRT1-201ENST00000569446 DENND4BO75064 1496 aaPredicted RBP26.48■■□□□ 1.83
SCRT1-201ENST00000569446 BCAR3O75815 825 aa26.47■■□□□ 1.83
SCRT1-201ENST00000569446 U2AF1L5P0DN76 240 aaPredicted RBP26.46■■□□□ 1.83
SCRT1-201ENST00000569446 U2AF1Q01081 240 aaKnown RBP eCLIP26.46■■□□□ 1.83
SCRT1-201ENST00000569446 PPP2R1AP30153 589 aa26.46■■□□□ 1.83
SCRT1-201ENST00000569446 RSPH4AQ5TD94 716 aa26.45■■□□□ 1.83
SCRT1-201ENST00000569446 TCOF1Q13428 1488 aaKnown RBP26.43■■□□□ 1.82
SCRT1-201ENST00000569446 PLEKHG5O94827 1062 aa26.43■■□□□ 1.82
SCRT1-201ENST00000569446 DISP3Q9P2K9 1392 aa26.43■■□□□ 1.82
SCRT1-201ENST00000569446 DDRGK1Q96HY6 314 aa26.43■■□□□ 1.82
SCRT1-201ENST00000569446 SRPK2P78362 688 aaKnown RBP26.42■■□□□ 1.82
SCRT1-201ENST00000569446 PZPP20742 1482 aa26.42■■□□□ 1.82
SCRT1-201ENST00000569446 PANK1Q8TE04 598 aa26.42■■□□□ 1.82
SCRT1-201ENST00000569446 FTSJ3Q8IY81 847 aaKnown RBP26.41■■□□□ 1.82
SCRT1-201ENST00000569446 UPF2Q9HAU5 1272 aaKnown RBP26.41■■□□□ 1.82
SCRT1-201ENST00000569446 ARID4BQ4LE39 1312 aaPredicted RBP26.41■■□□□ 1.82
SCRT1-201ENST00000569446 TEX14Q8IWB6 1497 aa26.4■■□□□ 1.82
SCRT1-201ENST00000569446 WDR62O43379 1518 aa26.39■■□□□ 1.81
SCRT1-201ENST00000569446 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
SCRT1-201ENST00000569446 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
SCRT1-201ENST00000569446 MAGI1Q96QZ7 1491 aaPredicted RBP26.38■■□□□ 1.81
SCRT1-201ENST00000569446 MLECQ14165 292 aa26.37■■□□□ 1.81
SCRT1-201ENST00000569446 DISP1Q96F81 1524 aa26.37■■□□□ 1.81
SCRT1-201ENST00000569446 SOX12O15370 315 aa26.35■■□□□ 1.81
SCRT1-201ENST00000569446 SLC12A5Q9H2X9 1139 aa26.35■■□□□ 1.81
SCRT1-201ENST00000569446 ABCA5Q8WWZ7 1642 aa26.35■■□□□ 1.81
SCRT1-201ENST00000569446 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.34■■□□□ 1.81
SCRT1-201ENST00000569446 CFAP53Q96M91 514 aa26.34■■□□□ 1.81
SCRT1-201ENST00000569446 BACH2Q9BYV9 841 aa26.34■■□□□ 1.81
SCRT1-201ENST00000569446 SPATA31E1Q6ZUB1 1445 aa26.34■■□□□ 1.81
SCRT1-201ENST00000569446 POGKQ9P215 609 aa26.33■■□□□ 1.81
SCRT1-201ENST00000569446 KANK1Q14678 1352 aa26.33■■□□□ 1.8
SCRT1-201ENST00000569446 ATP10BO94823 1461 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 PLEKHH2Q8IVE3 1493 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 IL27Q8NEV9 243 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 HSP90AA1P07900 732 aaKnown RBP26.3■■□□□ 1.8
SCRT1-201ENST00000569446 CENPJQ9HC77 1338 aaPredicted RBP26.29■■□□□ 1.8
SCRT1-201ENST00000569446 ERBINQ96RT1 1412 aa26.28■■□□□ 1.8
SCRT1-201ENST00000569446 KDM5BQ9UGL1 1544 aa26.27■■□□□ 1.8
SCRT1-201ENST00000569446 ELL2O00472 640 aaPredicted RBP26.27■■□□□ 1.8
SCRT1-201ENST00000569446 TESK2Q96S53 571 aa26.27■■□□□ 1.8
SCRT1-201ENST00000569446 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
SCRT1-201ENST00000569446 GZF1Q9H116 711 aaPredicted RBP26.26■■□□□ 1.79
SCRT1-201ENST00000569446 WASHC2CQ9Y4E1 1318 aa26.25■■□□□ 1.79
SCRT1-201ENST00000569446 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
SCRT1-201ENST00000569446 CENPQQ7L2Z9 268 aaPredicted RBP26.24■■□□□ 1.79
SCRT1-201ENST00000569446 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
SCRT1-201ENST00000569446 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
SCRT1-201ENST00000569446 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
SCRT1-201ENST00000569446 KIF14Q15058 1648 aa26.22■■□□□ 1.79
SCRT1-201ENST00000569446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.22■■□□□ 1.79
SCRT1-201ENST00000569446 CABP2Q9NPB3 220 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 KIAA0556O60303 1618 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 MTHFSP49914 203 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 ITPRIPQ8IWB1 547 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 NUTM2FA1L443 756 aa26.2■■□□□ 1.79
SCRT1-201ENST00000569446 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
SCRT1-201ENST00000569446 SPINK5Q9NQ38 1064 aaPredicted RBP26.2■■□□□ 1.78
SCRT1-201ENST00000569446 GGNBP2Q9H3C7 697 aa26.19■■□□□ 1.78
SCRT1-201ENST00000569446 MINK1Q8N4C8 1332 aaPredicted RBP26.18■■□□□ 1.78
SCRT1-201ENST00000569446 SCAPERQ9BY12 1400 aa26.18■■□□□ 1.78
SCRT1-201ENST00000569446 APBB1O00213 710 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms