RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 MAP3K13O43283 966 aa16.21■□□□□ 0.19
LYRM1-210ENST00000568820 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
LYRM1-210ENST00000568820 ABCC5O15440 1437 aa16.21■□□□□ 0.19
LYRM1-210ENST00000568820 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.18
LYRM1-210ENST00000568820 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.18
LYRM1-210ENST00000568820 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.18
LYRM1-210ENST00000568820 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.18
LYRM1-210ENST00000568820 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
LYRM1-210ENST00000568820 GABBR2O75899 941 aa16.19■□□□□ 0.18
LYRM1-210ENST00000568820 UHRF1BP1LA0JNW5 1464 aa16.19■□□□□ 0.18
LYRM1-210ENST00000568820 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
LYRM1-210ENST00000568820 ZNF644Q9H582 1327 aaPredicted RBP16.18■□□□□ 0.18
LYRM1-210ENST00000568820 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
LYRM1-210ENST00000568820 MS4A3Q96HJ5 214 aa16.16■□□□□ 0.18
LYRM1-210ENST00000568820 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
LYRM1-210ENST00000568820 PCDHB13Q9Y5F0 798 aa16.16■□□□□ 0.18
LYRM1-210ENST00000568820 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
LYRM1-210ENST00000568820 GALR2O43603 387 aaPredicted RBP16.13■□□□□ 0.17
LYRM1-210ENST00000568820 RSPH4AQ5TD94 716 aa16.12■□□□□ 0.17
LYRM1-210ENST00000568820 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
LYRM1-210ENST00000568820 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
LYRM1-210ENST00000568820 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 SHANK2Q9UPX8 1470 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
LYRM1-210ENST00000568820 IFNL1Q8IU54 200 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 SIN3AQ96ST3 1273 aa16.11■□□□□ 0.17
LYRM1-210ENST00000568820 TSPY4P0CV99 314 aa16.09■□□□□ 0.17
LYRM1-210ENST00000568820 TSPY10P0CW01 314 aa16.09■□□□□ 0.17
LYRM1-210ENST00000568820 RNF25Q96BH1 459 aaPredicted RBP16.09■□□□□ 0.17
LYRM1-210ENST00000568820 ADGBQ8N7X0 1667 aa16.09■□□□□ 0.17
LYRM1-210ENST00000568820 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.17
LYRM1-210ENST00000568820 TONSLQ96HA7 1378 aa16.08■□□□□ 0.16
LYRM1-210ENST00000568820 PREX2Q70Z35 1606 aa16.08■□□□□ 0.16
LYRM1-210ENST00000568820 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
LYRM1-210ENST00000568820 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
LYRM1-210ENST00000568820 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
LYRM1-210ENST00000568820 ZCCHC11Q5TAX3 1644 aaKnown RBP16.06■□□□□ 0.16
LYRM1-210ENST00000568820 RGL2O15211 777 aa16.05■□□□□ 0.16
LYRM1-210ENST00000568820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
LYRM1-210ENST00000568820 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
LYRM1-210ENST00000568820 KDM6BO15054 1643 aa16.05■□□□□ 0.16
LYRM1-210ENST00000568820 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
LYRM1-210ENST00000568820 RIOK3O14730 519 aaKnown RBP16.04■□□□□ 0.16
LYRM1-210ENST00000568820 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
LYRM1-210ENST00000568820 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
LYRM1-210ENST00000568820 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
LYRM1-210ENST00000568820 MBD5Q9P267 1494 aa16.02■□□□□ 0.16
LYRM1-210ENST00000568820 KIAA1107Q9UPP5 1409 aa16.02■□□□□ 0.15
LYRM1-210ENST00000568820 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
LYRM1-210ENST00000568820 TTC37Q6PGP7 1564 aa16.02■□□□□ 0.15
LYRM1-210ENST00000568820 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
LYRM1-210ENST00000568820 SAMD9LQ8IVG5 1584 aa16.01■□□□□ 0.15
LYRM1-210ENST00000568820 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
LYRM1-210ENST00000568820 MYO5CQ9NQX4 1742 aa16■□□□□ 0.15
LYRM1-210ENST00000568820 HNRNPMP52272 730 aaKnown RBP eCLIP16■□□□□ 0.15
LYRM1-210ENST00000568820 TRPC6Q9Y210 931 aa16■□□□□ 0.15
LYRM1-210ENST00000568820 PLCH2O75038 1416 aa16■□□□□ 0.15
LYRM1-210ENST00000568820 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
LYRM1-210ENST00000568820 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
LYRM1-210ENST00000568820 TIE1P35590 1138 aa15.98■□□□□ 0.15
LYRM1-210ENST00000568820 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.15
LYRM1-210ENST00000568820 PDAP1Q13442 181 aaKnown RBP15.96■□□□□ 0.15
LYRM1-210ENST00000568820 ARAP3Q8WWN8 1544 aa15.96■□□□□ 0.15
LYRM1-210ENST00000568820 KIF15Q9NS87 1388 aa15.96■□□□□ 0.15
LYRM1-210ENST00000568820 VGFO15240 615 aaPredicted RBP15.95■□□□□ 0.14
LYRM1-210ENST00000568820 SYCP2Q9BX26 1530 aa15.95■□□□□ 0.14
LYRM1-210ENST00000568820 MAST1Q9Y2H9 1570 aa15.95■□□□□ 0.14
LYRM1-210ENST00000568820 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
LYRM1-210ENST00000568820 TAOK2Q9UL54 1235 aa15.94■□□□□ 0.14
LYRM1-210ENST00000568820 PSEN1P49768 467 aa15.92■□□□□ 0.14
LYRM1-210ENST00000568820 BMP2KQ9NSY1 1161 aaPredicted RBP15.92■□□□□ 0.14
LYRM1-210ENST00000568820 PZPP20742 1482 aa15.92■□□□□ 0.14
LYRM1-210ENST00000568820 RPRD2Q5VT52 1461 aaKnown RBP15.9■□□□□ 0.14
LYRM1-210ENST00000568820 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
LYRM1-210ENST00000568820 KDM5DQ9BY66 1539 aa15.9■□□□□ 0.14
LYRM1-210ENST00000568820 NUP155O75694 1391 aa15.9■□□□□ 0.14
LYRM1-210ENST00000568820 ASTLQ6HA08 431 aaPredicted RBP15.89■□□□□ 0.13
LYRM1-210ENST00000568820 PLXNC1O60486 1568 aa15.88■□□□□ 0.13
LYRM1-210ENST00000568820 TTLL13PA6NNM8 815 aa15.88■□□□□ 0.13
LYRM1-210ENST00000568820 TMEM106CQ9BVX2 250 aa15.88■□□□□ 0.13
LYRM1-210ENST00000568820 ABCC1P33527 1531 aa15.88■□□□□ 0.13
LYRM1-210ENST00000568820 ASXL2Q76L83 1435 aa15.88■□□□□ 0.13
LYRM1-210ENST00000568820 ATMINO43313 823 aaPredicted RBP15.87■□□□□ 0.13
LYRM1-210ENST00000568820 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
LYRM1-210ENST00000568820 ABCA9Q8IUA7 1624 aa15.86■□□□□ 0.13
LYRM1-210ENST00000568820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
LYRM1-210ENST00000568820 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
LYRM1-210ENST00000568820 DUOX2Q9NRD8 1548 aa15.85■□□□□ 0.13
LYRM1-210ENST00000568820 ARHGEF12Q9NZN5 1544 aa15.84■□□□□ 0.13
LYRM1-210ENST00000568820 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.13
LYRM1-210ENST00000568820 ERBINQ96RT1 1412 aa15.83■□□□□ 0.13
LYRM1-210ENST00000568820 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.13
LYRM1-210ENST00000568820 FANCAO15360 1455 aa15.83■□□□□ 0.12
LYRM1-210ENST00000568820 ATN1P54259 1190 aaPredicted RBP15.81■□□□□ 0.12
LYRM1-210ENST00000568820 SPAG9O60271 1321 aaKnown RBP15.81■□□□□ 0.12
LYRM1-210ENST00000568820 TRAPPC8Q9Y2L5 1435 aa15.79■□□□□ 0.12
LYRM1-210ENST00000568820 TEX14Q8IWB6 1497 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms