RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, human

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4A-208	ENST00000568515	EXOC6	Q8TAG9	804 aa		28.78	■■■□□ 2.2
DENND4A-208	ENST00000568515	EIF4G3	O43432	1585 aa	Known RBP	28.78	■■■□□ 2.2
DENND4A-208	ENST00000568515	PLEKHD1	A6NEE1	506 aa		28.76	■■■□□ 2.19
DENND4A-208	ENST00000568515	TSPY4	P0CV99	314 aa		28.76	■■■□□ 2.19
DENND4A-208	ENST00000568515	TSPY10	P0CW01	314 aa		28.76	■■■□□ 2.19
DENND4A-208	ENST00000568515	PTPRG	P23470	1445 aa		28.75	■■■□□ 2.19
DENND4A-208	ENST00000568515	NLRP13	Q86W25	1043 aa		28.75	■■■□□ 2.19
DENND4A-208	ENST00000568515	ABCC10	Q5T3U5	1492 aa		28.74	■■■□□ 2.19
DENND4A-208	ENST00000568515	CARMIL2	Q6F5E8	1435 aa		28.74	■■■□□ 2.19
DENND4A-208	ENST00000568515	TCERG1	O14776	1098 aa	Known RBP	28.74	■■■□□ 2.19
DENND4A-208	ENST00000568515	PDE3B	Q13370	1112 aa		28.74	■■■□□ 2.19
DENND4A-208	ENST00000568515	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.73	■■■□□ 2.19
DENND4A-208	ENST00000568515	PARD3	Q8TEW0	1356 aa		28.72	■■■□□ 2.19
DENND4A-208	ENST00000568515	SALL2	Q9Y467	1007 aa	Predicted RBP	28.71	■■■□□ 2.19
DENND4A-208	ENST00000568515	RTL5	Q5HYW3	569 aa	Predicted RBP	28.7	■■■□□ 2.19
DENND4A-208	ENST00000568515	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.7	■■■□□ 2.19
DENND4A-208	ENST00000568515	JPH4	Q96JJ6	628 aa		28.68	■■■□□ 2.18
DENND4A-208	ENST00000568515	SYNJ2	O15056	1496 aa		28.66	■■■□□ 2.18
DENND4A-208	ENST00000568515	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.65	■■■□□ 2.18
DENND4A-208	ENST00000568515	PER1	O15534	1290 aa	Predicted RBP	28.65	■■■□□ 2.18
DENND4A-208	ENST00000568515	ATP10B	O94823	1461 aa		28.64	■■■□□ 2.18
DENND4A-208	ENST00000568515	PDE4A	P27815	886 aa		28.64	■■■□□ 2.18
DENND4A-208	ENST00000568515	PRAG1	Q86YV5	1406 aa		28.64	■■■□□ 2.17
DENND4A-208	ENST00000568515	ABCA8	O94911	1581 aa		28.63	■■■□□ 2.17
DENND4A-208	ENST00000568515	TRPM1	Q7Z4N2	1603 aa		28.63	■■■□□ 2.17
DENND4A-208	ENST00000568515	NPM2	Q86SE8	214 aa	Known RBP	28.63	■■■□□ 2.17
DENND4A-208	ENST00000568515	MS4A1	P11836	297 aa		28.62	■■■□□ 2.17
DENND4A-208	ENST00000568515	ARHGEF5	Q12774	1597 aa		28.62	■■■□□ 2.17
DENND4A-208	ENST00000568515	FBLN2	P98095	1184 aa		28.61	■■■□□ 2.17
DENND4A-208	ENST00000568515	CDCA7L	Q96GN5	454 aa		28.61	■■■□□ 2.17
DENND4A-208	ENST00000568515	FAM135A	Q9P2D6	1515 aa		28.6	■■■□□ 2.17
DENND4A-208	ENST00000568515	BACH2	Q9BYV9	841 aa		28.6	■■■□□ 2.17
DENND4A-208	ENST00000568515	NUP160	Q12769	1436 aa		28.58	■■■□□ 2.17
DENND4A-208	ENST00000568515	NBPF1	Q3BBV0	1214 aa		28.57	■■■□□ 2.16
DENND4A-208	ENST00000568515	WASHC2C	Q9Y4E1	1318 aa		28.57	■■■□□ 2.16
DENND4A-208	ENST00000568515	CCDC144A	A2RUR9	1427 aa		28.57	■■■□□ 2.16
DENND4A-208	ENST00000568515	INSR	P06213	1382 aa		28.56	■■■□□ 2.16
DENND4A-208	ENST00000568515	GPRASP1	Q5JY77	1395 aa		28.55	■■■□□ 2.16
DENND4A-208	ENST00000568515	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.53	■■■□□ 2.16
DENND4A-208	ENST00000568515	RGL3	Q3MIN7	710 aa		28.53	■■■□□ 2.16
DENND4A-208	ENST00000568515	BLM	P54132	1417 aa	Predicted RBP	28.52	■■■□□ 2.16
DENND4A-208	ENST00000568515	CCDC141	Q6ZP82	1450 aa		28.52	■■■□□ 2.16
DENND4A-208	ENST00000568515	CC2D1B	Q5T0F9	858 aa	Known RBP	28.52	■■■□□ 2.16
DENND4A-208	ENST00000568515	ZMYM4	Q5VZL5	1548 aa		28.51	■■■□□ 2.15
DENND4A-208	ENST00000568515	PLIN1	O60240	522 aa		28.51	■■■□□ 2.15
DENND4A-208	ENST00000568515	TESK2	Q96S53	571 aa		28.5	■■■□□ 2.15
DENND4A-208	ENST00000568515	DISP3	Q9P2K9	1392 aa		28.49	■■■□□ 2.15
DENND4A-208	ENST00000568515	RSPH4A	Q5TD94	716 aa		28.48	■■■□□ 2.15
DENND4A-208	ENST00000568515	PANK3	Q9H999	370 aa		28.48	■■■□□ 2.15
DENND4A-208	ENST00000568515	LAMC1	P11047	1609 aa		28.48	■■■□□ 2.15
DENND4A-208	ENST00000568515	A2M	P01023	1474 aa		28.48	■■■□□ 2.15
DENND4A-208	ENST00000568515	PLA2R1	Q13018	1463 aa		28.47	■■■□□ 2.15
DENND4A-208	ENST00000568515	PRDM15	P57071	1507 aa	Predicted RBP	28.47	■■■□□ 2.15
DENND4A-208	ENST00000568515	SAMD9L	Q8IVG5	1584 aa		28.47	■■■□□ 2.15
DENND4A-208	ENST00000568515	CRBN	Q96SW2	442 aa		28.46	■■■□□ 2.15
DENND4A-208	ENST00000568515	ERBIN	Q96RT1	1412 aa		28.44	■■■□□ 2.14
DENND4A-208	ENST00000568515	USP35	Q9P2H5	1018 aa		28.44	■■■□□ 2.14
DENND4A-208	ENST00000568515	LAS1L	Q9Y4W2	734 aa	Known RBP	28.44	■■■□□ 2.14
DENND4A-208	ENST00000568515	PLEKHH2	Q8IVE3	1493 aa		28.43	■■■□□ 2.14
DENND4A-208	ENST00000568515	CDC42BPB	Q9Y5S2	1711 aa		28.42	■■■□□ 2.14
DENND4A-208	ENST00000568515	NEFM	P07197	916 aa		28.41	■■■□□ 2.14
DENND4A-208	ENST00000568515	TMF1	P82094	1093 aa		28.4	■■■□□ 2.14
DENND4A-208	ENST00000568515	UNC13B	O14795	1591 aa		28.4	■■■□□ 2.14
DENND4A-208	ENST00000568515	PREX2	Q70Z35	1606 aa		28.4	■■■□□ 2.14
DENND4A-208	ENST00000568515	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.38	■■■□□ 2.13	9e-12	■■□□□ 11.5
DENND4A-208	ENST00000568515	PPM1G	O15355	546 aa	Predicted RBP	28.37	■■■□□ 2.13
DENND4A-208	ENST00000568515	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.37	■■■□□ 2.13
DENND4A-208	ENST00000568515	SKAP1	Q86WV1	359 aa		28.36	■■■□□ 2.13
DENND4A-208	ENST00000568515	MYO5C	Q9NQX4	1742 aa		28.35	■■■□□ 2.13
DENND4A-208	ENST00000568515	DDRGK1	Q96HY6	314 aa		28.35	■■■□□ 2.13
DENND4A-208	ENST00000568515	ADAMTS8	Q9UP79	889 aa		28.34	■■■□□ 2.13
DENND4A-208	ENST00000568515	ERCC6	Q03468	1493 aa		28.33	■■■□□ 2.13
DENND4A-208	ENST00000568515	MAST1	Q9Y2H9	1570 aa		28.33	■■■□□ 2.13
DENND4A-208	ENST00000568515	C20orf194	Q5TEA3	1177 aa		28.33	■■■□□ 2.13
DENND4A-208	ENST00000568515	SYCP2	Q9BX26	1530 aa		28.32	■■■□□ 2.12
DENND4A-208	ENST00000568515	IQGAP3	Q86VI3	1631 aa		28.31	■■■□□ 2.12
DENND4A-208	ENST00000568515	KDM2B	Q8NHM5	1336 aa		28.29	■■■□□ 2.12
DENND4A-208	ENST00000568515	ATP10A	O60312	1499 aa		28.27	■■■□□ 2.12
DENND4A-208	ENST00000568515	DUSP27	Q5VZP5	1158 aa		28.25	■■■□□ 2.11
DENND4A-208	ENST00000568515	ARHGAP5	Q13017	1502 aa		28.25	■■■□□ 2.11
DENND4A-208	ENST00000568515	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.25	■■■□□ 2.11
DENND4A-208	ENST00000568515	PLEKHH1	Q9ULM0	1364 aa		28.24	■■■□□ 2.11
DENND4A-208	ENST00000568515	PPP2R1A	P30153	589 aa		28.24	■■■□□ 2.11
DENND4A-208	ENST00000568515	MAGI2	Q86UL8	1455 aa		28.23	■■■□□ 2.11
DENND4A-208	ENST00000568515	PLXNC1	O60486	1568 aa		28.23	■■■□□ 2.11
DENND4A-208	ENST00000568515	WDR43	Q15061	677 aa	Known RBP eCLIP	28.23	■■■□□ 2.11
DENND4A-208	ENST00000568515	WDR7	Q9Y4E6	1490 aa		28.23	■■■□□ 2.11
DENND4A-208	ENST00000568515	RNF17	Q9BXT8	1623 aa	Known RBP	28.23	■■■□□ 2.11
DENND4A-208	ENST00000568515	KNSTRN	Q9Y448	316 aa		28.23	■■■□□ 2.11
DENND4A-208	ENST00000568515	ZNF521	Q96K83	1311 aa		28.2	■■■□□ 2.11
DENND4A-208	ENST00000568515	TTC37	Q6PGP7	1564 aa		28.19	■■■□□ 2.1
DENND4A-208	ENST00000568515	IL27	Q8NEV9	243 aa		28.19	■■■□□ 2.1
DENND4A-208	ENST00000568515	GOLGA2	Q08379	1002 aa		28.18	■■■□□ 2.1
DENND4A-208	ENST00000568515	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.18	■■■□□ 2.1
DENND4A-208	ENST00000568515	DUOX2	Q9NRD8	1548 aa		28.18	■■■□□ 2.1
DENND4A-208	ENST00000568515	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.16	■■■□□ 2.1
DENND4A-208	ENST00000568515	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.16	■■■□□ 2.1
DENND4A-208	ENST00000568515	FAM161A	Q3B820	660 aa		28.15	■■■□□ 2.1
DENND4A-208	ENST00000568515	C8orf34	Q49A92	452 aa		28.12	■■■□□ 2.09
DENND4A-208	ENST00000568515	SLFN5	Q08AF3	891 aa		28.11	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms