RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
HDGFL3-206ENST00000568294 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
HDGFL3-206ENST00000568294 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
HDGFL3-206ENST00000568294 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
HDGFL3-206ENST00000568294 PDE4AP27815 886 aa11.87□□□□□ -0.51
HDGFL3-206ENST00000568294 KIF14Q15058 1648 aa11.87□□□□□ -0.51
HDGFL3-206ENST00000568294 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
HDGFL3-206ENST00000568294 BCORL1Q5H9F3 1711 aa11.86□□□□□ -0.51
HDGFL3-206ENST00000568294 RALBP1Q15311 655 aa11.86□□□□□ -0.51
HDGFL3-206ENST00000568294 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
HDGFL3-206ENST00000568294 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
HDGFL3-206ENST00000568294 WDR43Q15061 677 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDGFL3-206ENST00000568294 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
HDGFL3-206ENST00000568294 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 DNMT1P26358 1616 aaKnown RBP11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 ADAMTS8Q9UP79 889 aa11.84□□□□□ -0.51
HDGFL3-206ENST00000568294 CARMIL2Q6F5E8 1435 aa11.83□□□□□ -0.52
HDGFL3-206ENST00000568294 RAPGEF6Q8TEU7 1601 aa11.83□□□□□ -0.52
HDGFL3-206ENST00000568294 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
HDGFL3-206ENST00000568294 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
HDGFL3-206ENST00000568294 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
HDGFL3-206ENST00000568294 ARXQ96QS3 562 aa11.82□□□□□ -0.52
HDGFL3-206ENST00000568294 TMF1P82094 1093 aa11.81□□□□□ -0.52
HDGFL3-206ENST00000568294 BRD4O60885 1362 aaPredicted RBP11.8□□□□□ -0.52
HDGFL3-206ENST00000568294 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
HDGFL3-206ENST00000568294 IFT140Q96RY7 1462 aa11.79□□□□□ -0.52
HDGFL3-206ENST00000568294 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-206ENST00000568294 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
HDGFL3-206ENST00000568294 PTPRGP23470 1445 aa11.77□□□□□ -0.53
HDGFL3-206ENST00000568294 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
HDGFL3-206ENST00000568294 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
HDGFL3-206ENST00000568294 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
HDGFL3-206ENST00000568294 RNF123Q5XPI4 1314 aa11.76□□□□□ -0.53
HDGFL3-206ENST00000568294 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
HDGFL3-206ENST00000568294 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
HDGFL3-206ENST00000568294 ATP10BO94823 1461 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 KDM5CP41229 1560 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 MBD5Q9P267 1494 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 APAF1O14727 1248 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
HDGFL3-206ENST00000568294 ARID4BQ4LE39 1312 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-206ENST00000568294 BCAR3O75815 825 aa11.73□□□□□ -0.53
HDGFL3-206ENST00000568294 TESK2Q96S53 571 aa11.73□□□□□ -0.53
HDGFL3-206ENST00000568294 LRPPRCP42704 1394 aaKnown RBP11.73□□□□□ -0.53
HDGFL3-206ENST00000568294 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
HDGFL3-206ENST00000568294 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
HDGFL3-206ENST00000568294 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDGFL3-206ENST00000568294 PLEKHH2Q8IVE3 1493 aa11.72□□□□□ -0.53
HDGFL3-206ENST00000568294 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
HDGFL3-206ENST00000568294 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
HDGFL3-206ENST00000568294 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.54
HDGFL3-206ENST00000568294 ERBINQ96RT1 1412 aa11.71□□□□□ -0.54
HDGFL3-206ENST00000568294 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
HDGFL3-206ENST00000568294 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
HDGFL3-206ENST00000568294 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
HDGFL3-206ENST00000568294 PARD3Q8TEW0 1356 aa11.7□□□□□ -0.54
HDGFL3-206ENST00000568294 PDE3BQ13370 1112 aa11.7□□□□□ -0.54
HDGFL3-206ENST00000568294 PRAG1Q86YV5 1406 aa11.7□□□□□ -0.54
HDGFL3-206ENST00000568294 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
HDGFL3-206ENST00000568294 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
HDGFL3-206ENST00000568294 PLEKHH1Q9ULM0 1364 aa11.69□□□□□ -0.54
HDGFL3-206ENST00000568294 BRPF3Q9ULD4 1205 aa11.69□□□□□ -0.54
HDGFL3-206ENST00000568294 SYNJ2O15056 1496 aa11.69□□□□□ -0.54
HDGFL3-206ENST00000568294 KIF3BO15066 747 aa11.68□□□□□ -0.54
HDGFL3-206ENST00000568294 COG6Q9Y2V7 657 aa11.68□□□□□ -0.54
HDGFL3-206ENST00000568294 PANK1Q8TE04 598 aa11.68□□□□□ -0.54
HDGFL3-206ENST00000568294 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
HDGFL3-206ENST00000568294 FAM135AQ9P2D6 1515 aa11.68□□□□□ -0.54
HDGFL3-206ENST00000568294 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
HDGFL3-206ENST00000568294 UHRF1BP1Q6BDS2 1440 aa11.67□□□□□ -0.54
HDGFL3-206ENST00000568294 ADGRL2O95490 1459 aa11.67□□□□□ -0.54
HDGFL3-206ENST00000568294 A2MP01023 1474 aa11.67□□□□□ -0.54
HDGFL3-206ENST00000568294 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
HDGFL3-206ENST00000568294 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
HDGFL3-206ENST00000568294 CCDC141Q6ZP82 1450 aa11.66□□□□□ -0.54
HDGFL3-206ENST00000568294 DUSP27Q5VZP5 1158 aa11.66□□□□□ -0.54
HDGFL3-206ENST00000568294 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
HDGFL3-206ENST00000568294 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.65□□□□□ -0.54
HDGFL3-206ENST00000568294 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
HDGFL3-206ENST00000568294 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
HDGFL3-206ENST00000568294 TMEM132EQ6IEE7 984 aa11.64□□□□□ -0.55
HDGFL3-206ENST00000568294 TNNQ9UQP3 1299 aa11.64□□□□□ -0.55
HDGFL3-206ENST00000568294 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 ADGBQ8N7X0 1667 aa11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 EFCAB2Q5VUJ9 269 aa11.63□□□□□ -0.55
HDGFL3-206ENST00000568294 EIF5BO60841 1220 aaKnown RBP11.62□□□□□ -0.55
HDGFL3-206ENST00000568294 MS4A1P11836 297 aa11.62□□□□□ -0.55
HDGFL3-206ENST00000568294 GGT6Q6P531 493 aa11.62□□□□□ -0.55
HDGFL3-206ENST00000568294 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms