RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-250ENST00000568290 WASHC2AQ641Q2 1341 aa10.38□□□□□ -0.75
ATXN3-250ENST00000568290 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
ATXN3-250ENST00000568290 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
ATXN3-250ENST00000568290 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
ATXN3-250ENST00000568290 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
ATXN3-250ENST00000568290 PRKRIP1Q9H875 184 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-250ENST00000568290 KIF14Q15058 1648 aa10.36□□□□□ -0.75
ATXN3-250ENST00000568290 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
ATXN3-250ENST00000568290 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
ATXN3-250ENST00000568290 ANP32EQ9BTT0 268 aa10.36□□□□□ -0.75
ATXN3-250ENST00000568290 MRS2Q9HD23 443 aa10.36□□□□□ -0.75
ATXN3-250ENST00000568290 TEX14Q8IWB6 1497 aa10.36□□□□□ -0.75
ATXN3-250ENST00000568290 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-250ENST00000568290 NUP160Q12769 1436 aa10.35□□□□□ -0.75
ATXN3-250ENST00000568290 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
ATXN3-250ENST00000568290 GPATCH8Q9UKJ3 1502 aaKnown RBP10.35□□□□□ -0.75
ATXN3-250ENST00000568290 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
ATXN3-250ENST00000568290 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
ATXN3-250ENST00000568290 HIRIP3Q9BW71 556 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-250ENST00000568290 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
ATXN3-250ENST00000568290 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
ATXN3-250ENST00000568290 ERICH6Q7L0X2 663 aa10.34□□□□□ -0.75
ATXN3-250ENST00000568290 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
ATXN3-250ENST00000568290 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
ATXN3-250ENST00000568290 PLEKHH2Q8IVE3 1493 aa10.34□□□□□ -0.75
ATXN3-250ENST00000568290 KDM5DQ9BY66 1539 aa10.33□□□□□ -0.76
ATXN3-250ENST00000568290 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
ATXN3-250ENST00000568290 ARHGEF5Q12774 1597 aa10.32□□□□□ -0.76
ATXN3-250ENST00000568290 RALBP1Q15311 655 aa10.32□□□□□ -0.76
ATXN3-250ENST00000568290 AMER1Q5JTC6 1135 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-250ENST00000568290 ZNF608Q9ULD9 1512 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-250ENST00000568290 WASHC2CQ9Y4E1 1318 aa10.32□□□□□ -0.76
ATXN3-250ENST00000568290 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
ATXN3-250ENST00000568290 PKD2Q13563 968 aa10.31□□□□□ -0.76
ATXN3-250ENST00000568290 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
ATXN3-250ENST00000568290 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
ATXN3-250ENST00000568290 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-250ENST00000568290 USP47Q96K76 1375 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 KIF15Q9NS87 1388 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
ATXN3-250ENST00000568290 RASEFQ8IZ41 740 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 BCANQ96GW7 911 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-250ENST00000568290 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-250ENST00000568290 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 PZPP20742 1482 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
ATXN3-250ENST00000568290 NUP155O75694 1391 aa10.29□□□□□ -0.76
ATXN3-250ENST00000568290 ABCA8O94911 1581 aa10.29□□□□□ -0.76
ATXN3-250ENST00000568290 MBD5Q9P267 1494 aa10.29□□□□□ -0.76
ATXN3-250ENST00000568290 PDE3BQ13370 1112 aa10.28□□□□□ -0.76
ATXN3-250ENST00000568290 RBM19Q9Y4C8 960 aaKnown RBP10.28□□□□□ -0.76
ATXN3-250ENST00000568290 CCDC141Q6ZP82 1450 aa10.28□□□□□ -0.76
ATXN3-250ENST00000568290 INSRP06213 1382 aa10.27□□□□□ -0.76
ATXN3-250ENST00000568290 PTPRGP23470 1445 aa10.27□□□□□ -0.77
ATXN3-250ENST00000568290 SMG6Q86US8 1419 aaKnown RBP10.27□□□□□ -0.77
ATXN3-250ENST00000568290 KDM6BO15054 1643 aa10.27□□□□□ -0.77
ATXN3-250ENST00000568290 FAM9BQ8IZU0 186 aa10.27□□□□□ -0.77
ATXN3-250ENST00000568290 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
ATXN3-250ENST00000568290 CARD11Q9BXL7 1154 aa10.27□□□□□ -0.77
ATXN3-250ENST00000568290 BRD4O60885 1362 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-250ENST00000568290 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
ATXN3-250ENST00000568290 PLB1Q6P1J6 1458 aa10.26□□□□□ -0.77
ATXN3-250ENST00000568290 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
ATXN3-250ENST00000568290 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
ATXN3-250ENST00000568290 NBPF8Q3BBV2 869 aa10.25□□□□□ -0.77
ATXN3-250ENST00000568290 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
ATXN3-250ENST00000568290 NUDCQ9Y266 331 aa10.25□□□□□ -0.77
ATXN3-250ENST00000568290 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-250ENST00000568290 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
ATXN3-250ENST00000568290 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
ATXN3-250ENST00000568290 ATP10BO94823 1461 aa10.23□□□□□ -0.77
ATXN3-250ENST00000568290 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
ATXN3-250ENST00000568290 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
ATXN3-250ENST00000568290 MAST1Q9Y2H9 1570 aa10.22□□□□□ -0.77
ATXN3-250ENST00000568290 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
ATXN3-250ENST00000568290 POTEHQ6S545 545 aa10.22□□□□□ -0.77
ATXN3-250ENST00000568290 KDM5CP41229 1560 aa10.22□□□□□ -0.77
ATXN3-250ENST00000568290 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
ATXN3-250ENST00000568290 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
ATXN3-250ENST00000568290 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
ATXN3-250ENST00000568290 LAMC1P11047 1609 aa10.19□□□□□ -0.78
ATXN3-250ENST00000568290 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
ATXN3-250ENST00000568290 GSE1Q14687 1217 aa10.19□□□□□ -0.78
ATXN3-250ENST00000568290 PREX2Q70Z35 1606 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
ATXN3-250ENST00000568290 TMF1P82094 1093 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 DCAF11Q8TEB1 546 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 FAM212AQ96EL1 285 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
ATXN3-250ENST00000568290 DUOX2Q9NRD8 1548 aa10.17□□□□□ -0.78
ATXN3-250ENST00000568290 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
ATXN3-250ENST00000568290 ATP10AO60312 1499 aa10.17□□□□□ -0.78
ATXN3-250ENST00000568290 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
ATXN3-250ENST00000568290 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
ATXN3-250ENST00000568290 ANP32AP39687 249 aaKnown RBP10.17□□□□□ -0.78
ATXN3-250ENST00000568290 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms