RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FOSBP53539 338 aa10.16□□□□□ -0.78
CAPN3-218ENST00000568153 NBR1Q14596 966 aa10.16□□□□□ -0.78
CAPN3-218ENST00000568153 PDIA6Q15084 440 aa10.15□□□□□ -0.78
CAPN3-218ENST00000568153 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
CAPN3-218ENST00000568153 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
CAPN3-218ENST00000568153 PBX2P40425 430 aa10.14□□□□□ -0.79
CAPN3-218ENST00000568153 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
CAPN3-218ENST00000568153 SEMA3EO15041 775 aa10.13□□□□□ -0.79
CAPN3-218ENST00000568153 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-218ENST00000568153 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
CAPN3-218ENST00000568153 PTGER2P43116 358 aa10.1□□□□□ -0.79
CAPN3-218ENST00000568153 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
CAPN3-218ENST00000568153 ARHGAP33O14559 1287 aa10.09□□□□□ -0.79
CAPN3-218ENST00000568153 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
CAPN3-218ENST00000568153 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
CAPN3-218ENST00000568153 HMGXB3Q12766 1538 aa10.08□□□□□ -0.8
CAPN3-218ENST00000568153 PHF14O94880 888 aa10.08□□□□□ -0.8
CAPN3-218ENST00000568153 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
CAPN3-218ENST00000568153 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
CAPN3-218ENST00000568153 TESPA1A2RU30 521 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-218ENST00000568153 PSEN2P49810 448 aa10.07□□□□□ -0.8
CAPN3-218ENST00000568153 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
CAPN3-218ENST00000568153 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-218ENST00000568153 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
CAPN3-218ENST00000568153 CC2D2AQ9P2K1 1620 aa10.05□□□□□ -0.8
CAPN3-218ENST00000568153 DMRTA1Q5VZB9 504 aa10.05□□□□□ -0.8
CAPN3-218ENST00000568153 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
CAPN3-218ENST00000568153 DDX12PQ92771 950 aa10.05□□□□□ -0.8
CAPN3-218ENST00000568153 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
CAPN3-218ENST00000568153 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
CAPN3-218ENST00000568153 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
CAPN3-218ENST00000568153 EPAS1Q99814 870 aa10.03□□□□□ -0.8
CAPN3-218ENST00000568153 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
CAPN3-218ENST00000568153 PTPREP23469 700 aa10.01□□□□□ -0.81
CAPN3-218ENST00000568153 MMRN1Q13201 1228 aa10□□□□□ -0.81
CAPN3-218ENST00000568153 TK2O00142 265 aa9.99□□□□□ -0.81
CAPN3-218ENST00000568153 PRIM1P49642 420 aaKnown RBP9.99□□□□□ -0.81
CAPN3-218ENST00000568153 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
CAPN3-218ENST00000568153 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
CAPN3-218ENST00000568153 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-218ENST00000568153 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
CAPN3-218ENST00000568153 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
CAPN3-218ENST00000568153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
CAPN3-218ENST00000568153 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
CAPN3-218ENST00000568153 LOC105371045A0A1W2PR82 267 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 COL9A1P20849 921 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 OSBPP22059 807 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-218ENST00000568153 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
CAPN3-218ENST00000568153 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 CFTRP13569 1480 aa9.96□□□□□ -0.82
CAPN3-218ENST00000568153 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-218ENST00000568153 HRO43593 1189 aa9.95□□□□□ -0.82
CAPN3-218ENST00000568153 VPS9D1Q9Y2B5 631 aa9.95□□□□□ -0.82
CAPN3-218ENST00000568153 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
CAPN3-218ENST00000568153 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
CAPN3-218ENST00000568153 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
CAPN3-218ENST00000568153 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
CAPN3-218ENST00000568153 MAP3K7O43318 606 aa9.92□□□□□ -0.82
CAPN3-218ENST00000568153 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
CAPN3-218ENST00000568153 ABCC8Q09428 1581 aa9.9□□□□□ -0.82
CAPN3-218ENST00000568153 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
CAPN3-218ENST00000568153 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-218ENST00000568153 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-218ENST00000568153 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
CAPN3-218ENST00000568153 GPIHBP1Q8IV16 184 aa9.85□□□□□ -0.83
CAPN3-218ENST00000568153 NUTM2FA1L443 756 aa9.84□□□□□ -0.83
CAPN3-218ENST00000568153 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-218ENST00000568153 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
CAPN3-218ENST00000568153 TRIM6-TRIM34B2RNG4 842 aa9.83□□□□□ -0.84
CAPN3-218ENST00000568153 GPR37O15354 613 aa9.83□□□□□ -0.84
CAPN3-218ENST00000568153 TPRNQ4KMQ1 711 aa9.83□□□□□ -0.84
CAPN3-218ENST00000568153 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-218ENST00000568153 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
CAPN3-218ENST00000568153 ZC3H15Q8WU90 426 aaKnown RBP9.82□□□□□ -0.84
CAPN3-218ENST00000568153 SOGA1O94964 1423 aa9.82□□□□□ -0.84
CAPN3-218ENST00000568153 EEA1Q15075 1411 aa9.82□□□□□ -0.84
CAPN3-218ENST00000568153 PDS5BQ9NTI5 1447 aa9.82□□□□□ -0.84
CAPN3-218ENST00000568153 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
CAPN3-218ENST00000568153 TSKSQ9UJT2 592 aa9.81□□□□□ -0.84
CAPN3-218ENST00000568153 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
CAPN3-218ENST00000568153 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-218ENST00000568153 PRSS12P56730 875 aa9.8□□□□□ -0.84
CAPN3-218ENST00000568153 PTGDRQ13258 359 aa9.8□□□□□ -0.84
CAPN3-218ENST00000568153 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
CAPN3-218ENST00000568153 NBPF3Q9H094 633 aa9.8□□□□□ -0.84
CAPN3-218ENST00000568153 FAM198AQ9UFP1 575 aa9.8□□□□□ -0.84
CAPN3-218ENST00000568153 NESP48681 1621 aa9.79□□□□□ -0.84
CAPN3-218ENST00000568153 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
CAPN3-218ENST00000568153 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
CAPN3-218ENST00000568153 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
CAPN3-218ENST00000568153 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
CAPN3-218ENST00000568153 LAMC3Q9Y6N6 1575 aa9.77□□□□□ -0.85
CAPN3-218ENST00000568153 FCHSD2O94868 740 aa9.77□□□□□ -0.85
CAPN3-218ENST00000568153 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
CAPN3-218ENST00000568153 TOP2BQ02880 1626 aa9.76□□□□□ -0.85
CAPN3-218ENST00000568153 C3orf80F5H4A9 247 aa9.76□□□□□ -0.85
CAPN3-218ENST00000568153 ZMYND10O75800 440 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms