RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	PPP1R3G	B7ZBB8	358 aa		11.26	□□□□□ -0.61
CBFB-208	ENST00000567947	VPS9D1	Q9Y2B5	631 aa		11.26	□□□□□ -0.61
CBFB-208	ENST00000567947	ARHGEF1	Q92888	912 aa	Known RBP	11.25	□□□□□ -0.61
CBFB-208	ENST00000567947	KCNV2	Q8TDN2	545 aa		11.24	□□□□□ -0.61
CBFB-208	ENST00000567947	DDX12P	Q92771	950 aa		11.24	□□□□□ -0.61
CBFB-208	ENST00000567947	EN1	Q05925	392 aa	Predicted RBP	11.22	□□□□□ -0.61
CBFB-208	ENST00000567947	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.21	□□□□□ -0.61
CBFB-208	ENST00000567947	COL9A1	P20849	921 aa		11.2	□□□□□ -0.62
CBFB-208	ENST00000567947	NBR1	Q14596	966 aa		11.2	□□□□□ -0.62
CBFB-208	ENST00000567947	C6orf132	Q5T0Z8	1188 aa		11.2	□□□□□ -0.62
CBFB-208	ENST00000567947	P3H3	Q8IVL6	736 aa		11.2	□□□□□ -0.62
CBFB-208	ENST00000567947	ONECUT3	O60422	494 aa	Predicted RBP	11.16	□□□□□ -0.62
CBFB-208	ENST00000567947	PRIM1	P49642	420 aa	Known RBP	11.15	□□□□□ -0.62
CBFB-208	ENST00000567947	RBM33	Q96EV2	1170 aa	Known RBP	11.15	□□□□□ -0.62
CBFB-208	ENST00000567947	MAP3K7	O43318	606 aa		11.14	□□□□□ -0.63
CBFB-208	ENST00000567947	OSBP	P22059	807 aa		11.14	□□□□□ -0.63
CBFB-208	ENST00000567947	RABGEF1	Q9UJ41	708 aa		11.14	□□□□□ -0.63
CBFB-208	ENST00000567947	GRXCR2	A6NFK2	248 aa		11.13	□□□□□ -0.63
CBFB-208	ENST00000567947	HAP1	P54257	671 aa	Predicted RBP	11.13	□□□□□ -0.63
CBFB-208	ENST00000567947	TSR1	Q2NL82	804 aa	Known RBP	11.13	□□□□□ -0.63
CBFB-208	ENST00000567947	PROX2	Q3B8N5	592 aa		11.13	□□□□□ -0.63
CBFB-208	ENST00000567947	NBPF3	Q9H094	633 aa		11.12	□□□□□ -0.63
CBFB-208	ENST00000567947	CERK	Q8TCT0	537 aa		11.1	□□□□□ -0.63
CBFB-208	ENST00000567947	STAC3	Q96MF2	364 aa		11.1	□□□□□ -0.63
CBFB-208	ENST00000567947	TRIM6-TRIM34	B2RNG4	842 aa		11.09	□□□□□ -0.63
CBFB-208	ENST00000567947	MRPL50	Q8N5N7	158 aa	Known RBP	11.09	□□□□□ -0.63
CBFB-208	ENST00000567947	HCST	Q9UBK5	93 aa		11.07	□□□□□ -0.64
CBFB-208	ENST00000567947	KDM2A	Q9Y2K7	1162 aa		11.07	□□□□□ -0.64
CBFB-208	ENST00000567947	MLLT3	P42568	568 aa	Predicted RBP	11.06	□□□□□ -0.64
CBFB-208	ENST00000567947	LAPTM4B	Q86VI4	370 aa		11.06	□□□□□ -0.64
CBFB-208	ENST00000567947	KCTD12	Q96CX2	325 aa	Known RBP	11.05	□□□□□ -0.64
CBFB-208	ENST00000567947	KIAA1468	Q9P260	1216 aa		11.05	□□□□□ -0.64
CBFB-208	ENST00000567947	RBM27	Q9P2N5	1060 aa	Known RBP	11.05	□□□□□ -0.64
CBFB-208	ENST00000567947	CDHR5	Q9HBB8	845 aa		11.04	□□□□□ -0.64
CBFB-208	ENST00000567947	PRSS12	P56730	875 aa		11.03	□□□□□ -0.64
CBFB-208	ENST00000567947	VSIG10	Q8N0Z9	540 aa		11.03	□□□□□ -0.64
CBFB-208	ENST00000567947	TSKS	Q9UJT2	592 aa		11.03	□□□□□ -0.64
CBFB-208	ENST00000567947	THSD4	Q6ZMP0	1018 aa		11.02	□□□□□ -0.65
CBFB-208	ENST00000567947	CDCA7L	Q96GN5	454 aa		11.02	□□□□□ -0.65
CBFB-208	ENST00000567947	WNT2B	Q93097	391 aa		11.01	□□□□□ -0.65
CBFB-208	ENST00000567947	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.01	□□□□□ -0.65
CBFB-208	ENST00000567947	GOLGA8CP	A6NN73	597 aa		11	□□□□□ -0.65
CBFB-208	ENST00000567947	SEMA3E	O15041	775 aa		10.99	□□□□□ -0.65
CBFB-208	ENST00000567947	FAM98C	Q17RN3	349 aa	Known RBP	10.99	□□□□□ -0.65
CBFB-208	ENST00000567947	PACS2	Q86VP3	889 aa		10.99	□□□□□ -0.65
CBFB-208	ENST00000567947	TTC13	Q8NBP0	860 aa		10.99	□□□□□ -0.65
CBFB-208	ENST00000567947	FAM198A	Q9UFP1	575 aa		10.99	□□□□□ -0.65
CBFB-208	ENST00000567947	TESPA1	A2RU30	521 aa	Predicted RBP	10.98	□□□□□ -0.65
CBFB-208	ENST00000567947	ZFR	Q96KR1	1074 aa	Known RBP	10.97	□□□□□ -0.65
CBFB-208	ENST00000567947	ANKK1	Q8NFD2	765 aa		10.96	□□□□□ -0.65
CBFB-208	ENST00000567947	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.96	□□□□□ -0.65
CBFB-208	ENST00000567947	NBPF26	B4DH59	902 aa		10.94	□□□□□ -0.66
CBFB-208	ENST00000567947	SOWAHB	A6NEL2	793 aa		10.93	□□□□□ -0.66
CBFB-208	ENST00000567947	PTGDR	Q13258	359 aa		10.93	□□□□□ -0.66
CBFB-208	ENST00000567947	C3orf80	F5H4A9	247 aa		10.92	□□□□□ -0.66
CBFB-208	ENST00000567947	PADI6	Q6TGC4	694 aa		10.92	□□□□□ -0.66
CBFB-208	ENST00000567947	TATDN2	Q93075	761 aa		10.92	□□□□□ -0.66
CBFB-208	ENST00000567947	PTPN5	P54829	565 aa		10.9	□□□□□ -0.66
CBFB-208	ENST00000567947	BCAM	P50895	628 aa		10.89	□□□□□ -0.67
CBFB-208	ENST00000567947	SMYD5	Q6GMV2	418 aa		10.89	□□□□□ -0.67
CBFB-208	ENST00000567947	NYAP1	Q6ZVC0	841 aa		10.88	□□□□□ -0.67
CBFB-208	ENST00000567947	PNMA3	Q9UL41	463 aa		10.88	□□□□□ -0.67
CBFB-208	ENST00000567947	SMAP	O00193	183 aa		10.87	□□□□□ -0.67
CBFB-208	ENST00000567947	NUDT18	Q6ZVK8	323 aa		10.87	□□□□□ -0.67
CBFB-208	ENST00000567947	LRCH3	Q96II8	777 aa		10.87	□□□□□ -0.67
CBFB-208	ENST00000567947	PLA2G2E	Q9NZK7	142 aa		10.87	□□□□□ -0.67
CBFB-208	ENST00000567947	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.86	□□□□□ -0.67
CBFB-208	ENST00000567947	NUTM2F	A1L443	756 aa		10.85	□□□□□ -0.67
CBFB-208	ENST00000567947	FCHSD2	O94868	740 aa		10.85	□□□□□ -0.67
CBFB-208	ENST00000567947	IFFO2	Q5TF58	517 aa		10.84	□□□□□ -0.67
CBFB-208	ENST00000567947	EYA1	Q99502	592 aa		10.84	□□□□□ -0.67
CBFB-208	ENST00000567947	TSR3	Q9UJK0	312 aa	Known RBP	10.84	□□□□□ -0.67
CBFB-208	ENST00000567947	GPR37	O15354	613 aa		10.82	□□□□□ -0.68
CBFB-208	ENST00000567947	RBM26	Q5T8P6	1007 aa	Known RBP	10.82	□□□□□ -0.68
CBFB-208	ENST00000567947	SAMD7	Q7Z3H4	446 aa		10.82	□□□□□ -0.68
CBFB-208	ENST00000567947	WBP1L	Q9NX94	342 aa		10.82	□□□□□ -0.68
CBFB-208	ENST00000567947	HIC1	Q14526	733 aa		10.81	□□□□□ -0.68
CBFB-208	ENST00000567947	HPS5	Q9UPZ3	1129 aa		10.81	□□□□□ -0.68
CBFB-208	ENST00000567947	ADGRG1	Q9Y653	693 aa		10.8	□□□□□ -0.68
CBFB-208	ENST00000567947	ITGBL1	O95965	494 aa	Predicted RBP	10.79	□□□□□ -0.68
CBFB-208	ENST00000567947	RBM46	Q8TBY0	533 aa	Known RBP	10.76	□□□□□ -0.69
CBFB-208	ENST00000567947	GNPAT	O15228	680 aa		10.75	□□□□□ -0.69
CBFB-208	ENST00000567947	PPP4C	P60510	307 aa		10.75	□□□□□ -0.69
CBFB-208	ENST00000567947	DNAJB2	P25686	324 aa		10.74	□□□□□ -0.69
CBFB-208	ENST00000567947	HDGF	P51858	240 aa	Known RBP	10.74	□□□□□ -0.69
CBFB-208	ENST00000567947	SWT1	Q5T5J6	900 aa	Known RBP	10.74	□□□□□ -0.69
CBFB-208	ENST00000567947	SLF2	Q8IX21	1173 aa		10.73	□□□□□ -0.69
CBFB-208	ENST00000567947	NECTIN2	Q92692	538 aa		10.73	□□□□□ -0.69
CBFB-208	ENST00000567947	TMEM134	Q9H6X4	195 aa		10.73	□□□□□ -0.69
CBFB-208	ENST00000567947	GPIHBP1	Q8IV16	184 aa		10.72	□□□□□ -0.69
CBFB-208	ENST00000567947	PXYLP1	Q8TE99	480 aa		10.71	□□□□□ -0.69
CBFB-208	ENST00000567947	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.7	□□□□□ -0.7
CBFB-208	ENST00000567947	RCCD1	A6NED2	376 aa		10.7	□□□□□ -0.7
CBFB-208	ENST00000567947	TULP1	O00294	542 aa	Predicted RBP	10.7	□□□□□ -0.7
CBFB-208	ENST00000567947	OAT	P04181	439 aa		10.7	□□□□□ -0.7
CBFB-208	ENST00000567947	FECH	P22830	423 aa		10.69	□□□□□ -0.7
CBFB-208	ENST00000567947	FAM161A	Q3B820	660 aa		10.69	□□□□□ -0.7
CBFB-208	ENST00000567947		A0A0G2JS52	829 aa		10.68	□□□□□ -0.7
CBFB-208	ENST00000567947	METTL3	Q86U44	580 aa	Known RBP	10.68	□□□□□ -0.7
CBFB-208	ENST00000567947	SLC4A3	P48751	1232 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms