RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PSEN2P49810 448 aa10.28□□□□□ -0.76
CAPN3-217ENST00000567817 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-217ENST00000567817 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
CAPN3-217ENST00000567817 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
CAPN3-217ENST00000567817 SEMA3EO15041 775 aa10.25□□□□□ -0.77
CAPN3-217ENST00000567817 MAP3K7O43318 606 aa10.25□□□□□ -0.77
CAPN3-217ENST00000567817 OSBPP22059 807 aa10.25□□□□□ -0.77
CAPN3-217ENST00000567817 MLLT3P42568 568 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-217ENST00000567817 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
CAPN3-217ENST00000567817 RBM33Q96EV2 1170 aaKnown RBP10.25□□□□□ -0.77
CAPN3-217ENST00000567817 NACADO15069 1562 aa10.25□□□□□ -0.77
CAPN3-217ENST00000567817 TK2O00142 265 aa10.24□□□□□ -0.77
CAPN3-217ENST00000567817 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
CAPN3-217ENST00000567817 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
CAPN3-217ENST00000567817 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
CAPN3-217ENST00000567817 TESPA1A2RU30 521 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-217ENST00000567817 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
CAPN3-217ENST00000567817 SPNS2Q8IVW8 549 aa10.22□□□□□ -0.77
CAPN3-217ENST00000567817 PRIM1P49642 420 aaKnown RBP10.21□□□□□ -0.77
CAPN3-217ENST00000567817 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.77
CAPN3-217ENST00000567817 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
CAPN3-217ENST00000567817 COL9A1P20849 921 aa10.19□□□□□ -0.78
CAPN3-217ENST00000567817 SMYD5Q6GMV2 418 aa10.19□□□□□ -0.78
CAPN3-217ENST00000567817 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
CAPN3-217ENST00000567817 VPS9D1Q9Y2B5 631 aa10.18□□□□□ -0.78
CAPN3-217ENST00000567817 HRO43593 1189 aa10.16□□□□□ -0.78
CAPN3-217ENST00000567817 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.78
CAPN3-217ENST00000567817 ONECUT3O60422 494 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-217ENST00000567817 MMRN1Q13201 1228 aa10.13□□□□□ -0.79
CAPN3-217ENST00000567817 PROX2Q3B8N5 592 aa10.13□□□□□ -0.79
CAPN3-217ENST00000567817 PLSCR2Q9NRY7 297 aa10.13□□□□□ -0.79
CAPN3-217ENST00000567817 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
CAPN3-217ENST00000567817 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-217ENST00000567817 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
CAPN3-217ENST00000567817 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
CAPN3-217ENST00000567817 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
CAPN3-217ENST00000567817 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-217ENST00000567817 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
CAPN3-217ENST00000567817 NPDC1Q9NQX5 325 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-217ENST00000567817 PRSS12P56730 875 aa10.09□□□□□ -0.79
CAPN3-217ENST00000567817 CDCA7LQ96GN5 454 aa10.09□□□□□ -0.79
CAPN3-217ENST00000567817 STAC3Q96MF2 364 aa10.09□□□□□ -0.79
CAPN3-217ENST00000567817 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
CAPN3-217ENST00000567817 PTGDRQ13258 359 aa10.08□□□□□ -0.8
CAPN3-217ENST00000567817 RNF166Q96A37 237 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-217ENST00000567817 SHROOM4Q9ULL8 1493 aa10.08□□□□□ -0.8
CAPN3-217ENST00000567817 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
CAPN3-217ENST00000567817 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
CAPN3-217ENST00000567817 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
CAPN3-217ENST00000567817 PACS2Q86VP3 889 aa10.06□□□□□ -0.8
CAPN3-217ENST00000567817 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
CAPN3-217ENST00000567817 FCHSD2O94868 740 aa10.05□□□□□ -0.8
CAPN3-217ENST00000567817 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
CAPN3-217ENST00000567817 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
CAPN3-217ENST00000567817 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
CAPN3-217ENST00000567817 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
CAPN3-217ENST00000567817 NBPF26B4DH59 902 aa10.03□□□□□ -0.8
CAPN3-217ENST00000567817 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
CAPN3-217ENST00000567817 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
CAPN3-217ENST00000567817 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
CAPN3-217ENST00000567817 BICRAQ9NZM4 1560 aa10.02□□□□□ -0.81
CAPN3-217ENST00000567817 HIC1Q14526 733 aa10.02□□□□□ -0.81
CAPN3-217ENST00000567817 GOLGA8CPA6NN73 597 aa10.01□□□□□ -0.81
CAPN3-217ENST00000567817 CECR2Q9BXF3 1484 aa10□□□□□ -0.81
CAPN3-217ENST00000567817 GPR37O15354 613 aa10□□□□□ -0.81
CAPN3-217ENST00000567817 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
CAPN3-217ENST00000567817 SEPT9Q9UHD8 586 aaPredicted RBP10□□□□□ -0.81
CAPN3-217ENST00000567817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.99□□□□□ -0.81
CAPN3-217ENST00000567817 PNMA3Q9UL41 463 aa9.99□□□□□ -0.81
CAPN3-217ENST00000567817 TATDN2Q93075 761 aa9.98□□□□□ -0.81
CAPN3-217ENST00000567817 GNPATO15228 680 aa9.97□□□□□ -0.81
CAPN3-217ENST00000567817 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
CAPN3-217ENST00000567817 LMOD2Q6P5Q4 547 aa9.96□□□□□ -0.82
CAPN3-217ENST00000567817 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
CAPN3-217ENST00000567817 WNT2BQ93097 391 aa9.96□□□□□ -0.82
CAPN3-217ENST00000567817 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
CAPN3-217ENST00000567817 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
CAPN3-217ENST00000567817 SMAPO00193 183 aa9.95□□□□□ -0.82
CAPN3-217ENST00000567817 ANKK1Q8NFD2 765 aa9.95□□□□□ -0.82
CAPN3-217ENST00000567817 CC2D2AQ9P2K1 1620 aa9.94□□□□□ -0.82
CAPN3-217ENST00000567817 THSD4Q6ZMP0 1018 aa9.94□□□□□ -0.82
CAPN3-217ENST00000567817 BCANQ96GW7 911 aa9.94□□□□□ -0.82
CAPN3-217ENST00000567817 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
CAPN3-217ENST00000567817 RBM46Q8TBY0 533 aaKnown RBP9.92□□□□□ -0.82
CAPN3-217ENST00000567817 EYA1Q99502 592 aa9.92□□□□□ -0.82
CAPN3-217ENST00000567817 HCSTQ9UBK5 93 aa9.92□□□□□ -0.82
CAPN3-217ENST00000567817 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
CAPN3-217ENST00000567817 OATP04181 439 aa9.89□□□□□ -0.83
CAPN3-217ENST00000567817 FECHP22830 423 aa9.89□□□□□ -0.83
CAPN3-217ENST00000567817 LRCH3Q96II8 777 aa9.89□□□□□ -0.83
CAPN3-217ENST00000567817 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-217ENST00000567817 DNAJB2P25686 324 aa9.87□□□□□ -0.83
CAPN3-217ENST00000567817 BCAMP50895 628 aa9.87□□□□□ -0.83
CAPN3-217ENST00000567817 MAP2K5Q13163 448 aa9.87□□□□□ -0.83
CAPN3-217ENST00000567817 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
CAPN3-217ENST00000567817 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
CAPN3-217ENST00000567817 PTPN5P54829 565 aa9.86□□□□□ -0.83
CAPN3-217ENST00000567817 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
CAPN3-217ENST00000567817 PXYLP1Q8TE99 480 aa9.86□□□□□ -0.83
CAPN3-217ENST00000567817 EIF4G1Q04637 1599 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms