RNA–Protein interactions for RNA: ENST00000567451.1

CCP110-209, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 1 (best)

Gene CCP110, Length 1,151 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-209ENST00000567451 EPAS1Q99814 870 aa13.33□□□□□ -0.28
CCP110-209ENST00000567451 PDIA6Q15084 440 aa13.32□□□□□ -0.28
CCP110-209ENST00000567451 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
CCP110-209ENST00000567451 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
CCP110-209ENST00000567451 PTPN5P54829 565 aa13.3□□□□□ -0.28
CCP110-209ENST00000567451 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
CCP110-209ENST00000567451 DDX12PQ92771 950 aa13.3□□□□□ -0.28
CCP110-209ENST00000567451 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
CCP110-209ENST00000567451 ARIH1Q9Y4X5 557 aaPredicted RBP13.3□□□□□ -0.28
CCP110-209ENST00000567451 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
CCP110-209ENST00000567451 WNT2BQ93097 391 aa13.27□□□□□ -0.29
CCP110-209ENST00000567451 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
CCP110-209ENST00000567451 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
CCP110-209ENST00000567451 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
CCP110-209ENST00000567451 E2F4Q16254 413 aa13.24□□□□□ -0.29
CCP110-209ENST00000567451 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
CCP110-209ENST00000567451 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
CCP110-209ENST00000567451 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
CCP110-209ENST00000567451 SPDYE16A6NNV3 312 aaPredicted RBP13.22□□□□□ -0.29
CCP110-209ENST00000567451 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
CCP110-209ENST00000567451 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
CCP110-209ENST00000567451 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
CCP110-209ENST00000567451 LAPTM4BQ86VI4 370 aa13.2□□□□□ -0.3
CCP110-209ENST00000567451 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
CCP110-209ENST00000567451 NBR1Q14596 966 aa13.18□□□□□ -0.3
CCP110-209ENST00000567451 TSKSQ9UJT2 592 aa13.17□□□□□ -0.3
CCP110-209ENST00000567451 ZFRQ96KR1 1074 aaKnown RBP13.16□□□□□ -0.3
CCP110-209ENST00000567451 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
CCP110-209ENST00000567451 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
CCP110-209ENST00000567451 BCAMP50895 628 aa13.15□□□□□ -0.3
CCP110-209ENST00000567451 FAM198AQ9UFP1 575 aa13.15□□□□□ -0.3
CCP110-209ENST00000567451 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
CCP110-209ENST00000567451 OSBPP22059 807 aa13.13□□□□□ -0.31
CCP110-209ENST00000567451 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
CCP110-209ENST00000567451 MAP3K7O43318 606 aa13.11□□□□□ -0.31
CCP110-209ENST00000567451 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
CCP110-209ENST00000567451 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
CCP110-209ENST00000567451 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
CCP110-209ENST00000567451 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
CCP110-209ENST00000567451 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
CCP110-209ENST00000567451 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
CCP110-209ENST00000567451 WBP1LQ9NX94 342 aa13.07□□□□□ -0.32
CCP110-209ENST00000567451 A0A0G2JS52 829 aa13.06□□□□□ -0.32
CCP110-209ENST00000567451 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
CCP110-209ENST00000567451 PRSS12P56730 875 aa13.05□□□□□ -0.32
CCP110-209ENST00000567451 NPDC1Q9NQX5 325 aaPredicted RBP13.03□□□□□ -0.32
CCP110-209ENST00000567451 SMAPO00193 183 aa13.01□□□□□ -0.33
CCP110-209ENST00000567451 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
CCP110-209ENST00000567451 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
CCP110-209ENST00000567451 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
CCP110-209ENST00000567451 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CCP110-209ENST00000567451 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.98□□□□□ -0.33
CCP110-209ENST00000567451 RGS20O76081 388 aa12.97□□□□□ -0.33
CCP110-209ENST00000567451 TSR3Q9UJK0 312 aaKnown RBP12.97□□□□□ -0.33
CCP110-209ENST00000567451 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
CCP110-209ENST00000567451 TATDN2Q93075 761 aa12.96□□□□□ -0.33
CCP110-209ENST00000567451 LRCH3Q96II8 777 aa12.96□□□□□ -0.33
CCP110-209ENST00000567451 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
CCP110-209ENST00000567451 MLLT3P42568 568 aaPredicted RBP12.95□□□□□ -0.34
CCP110-209ENST00000567451 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
CCP110-209ENST00000567451 SAMD7Q7Z3H4 446 aa12.93□□□□□ -0.34
CCP110-209ENST00000567451 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
CCP110-209ENST00000567451 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
CCP110-209ENST00000567451 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
CCP110-209ENST00000567451 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
CCP110-209ENST00000567451 KCNC4Q03721 635 aa12.87□□□□□ -0.35
CCP110-209ENST00000567451 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
CCP110-209ENST00000567451 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
CCP110-209ENST00000567451 PPP4CP60510 307 aa12.85□□□□□ -0.35
CCP110-209ENST00000567451 EYA1Q99502 592 aa12.84□□□□□ -0.35
CCP110-209ENST00000567451 PTGDRQ13258 359 aa12.8□□□□□ -0.36
CCP110-209ENST00000567451 APLP1P51693 650 aa12.79□□□□□ -0.36
CCP110-209ENST00000567451 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
CCP110-209ENST00000567451 MTRQ99707 1265 aa12.76□□□□□ -0.37
CCP110-209ENST00000567451 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
CCP110-209ENST00000567451 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
CCP110-209ENST00000567451 SEMA3EO15041 775 aa12.73□□□□□ -0.37
CCP110-209ENST00000567451 IL21Q9HBE4 155 aa12.71□□□□□ -0.37
CCP110-209ENST00000567451 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
CCP110-209ENST00000567451 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
CCP110-209ENST00000567451 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
CCP110-209ENST00000567451 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
CCP110-209ENST00000567451 RNF40O75150 1001 aa12.66□□□□□ -0.38
CCP110-209ENST00000567451 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
CCP110-209ENST00000567451 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
CCP110-209ENST00000567451 SLF2Q8IX21 1173 aa12.66□□□□□ -0.38
CCP110-209ENST00000567451 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
CCP110-209ENST00000567451 TMEM134Q9H6X4 195 aa12.64□□□□□ -0.39
CCP110-209ENST00000567451 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
CCP110-209ENST00000567451 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
CCP110-209ENST00000567451 DNAJB2P25686 324 aa12.62□□□□□ -0.39
CCP110-209ENST00000567451 RCCD1A6NED2 376 aa12.6□□□□□ -0.39
CCP110-209ENST00000567451 LCE2BO14633 110 aa12.6□□□□□ -0.39
CCP110-209ENST00000567451 GPR37O15354 613 aa12.6□□□□□ -0.39
CCP110-209ENST00000567451 FCHSD2O94868 740 aa12.59□□□□□ -0.39
CCP110-209ENST00000567451 COPS2P61201 443 aa12.59□□□□□ -0.39
CCP110-209ENST00000567451 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
CCP110-209ENST00000567451 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
CCP110-209ENST00000567451 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
CCP110-209ENST00000567451 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms