RNA–Protein interactions for RNA: ENST00000566446.1

AL390728.6-201, humanhuman

BASIC

Gene AL390728.6, Length 1,246 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.6-201ENST00000566446 TYW1BQ6NUM6 668 aa17.46■□□□□ 0.39
AL390728.6-201ENST00000566446 PTPN5P54829 565 aa17.45■□□□□ 0.38
AL390728.6-201ENST00000566446 WNT2BQ93097 391 aa17.43■□□□□ 0.38
AL390728.6-201ENST00000566446 RABGEF1Q9UJ41 708 aa17.41■□□□□ 0.38
AL390728.6-201ENST00000566446 EPAS1Q99814 870 aa17.39■□□□□ 0.37
AL390728.6-201ENST00000566446 COL9A1P20849 921 aa17.37■□□□□ 0.37
AL390728.6-201ENST00000566446 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
AL390728.6-201ENST00000566446 DPYSL4O14531 572 aa17.36■□□□□ 0.37
AL390728.6-201ENST00000566446 PROX2Q3B8N5 592 aa17.34■□□□□ 0.37
AL390728.6-201ENST00000566446 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.36
AL390728.6-201ENST00000566446 C6orf132Q5T0Z8 1188 aa17.3■□□□□ 0.36
AL390728.6-201ENST00000566446 LAPTM4BQ86VI4 370 aa17.3■□□□□ 0.36
AL390728.6-201ENST00000566446 SPRYD3Q8NCJ5 442 aa17.27■□□□□ 0.36
AL390728.6-201ENST00000566446 ANKK1Q8NFD2 765 aa17.27■□□□□ 0.36
AL390728.6-201ENST00000566446 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
AL390728.6-201ENST00000566446 RGS20O76081 388 aa17.23■□□□□ 0.35
AL390728.6-201ENST00000566446 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
AL390728.6-201ENST00000566446 PDIA6Q15084 440 aa17.21■□□□□ 0.35
AL390728.6-201ENST00000566446 DDX12PQ92771 950 aa17.21■□□□□ 0.35
AL390728.6-201ENST00000566446 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
AL390728.6-201ENST00000566446 SPDYE16A6NNV3 312 aaPredicted RBP17.19■□□□□ 0.34
AL390728.6-201ENST00000566446 TRIM6-TRIM34B2RNG4 842 aa17.19■□□□□ 0.34
AL390728.6-201ENST00000566446 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
AL390728.6-201ENST00000566446 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
AL390728.6-201ENST00000566446 ZFRQ96KR1 1074 aaKnown RBP17.18■□□□□ 0.34
AL390728.6-201ENST00000566446 A0A0G2JS52 829 aa17.16■□□□□ 0.34
AL390728.6-201ENST00000566446 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
AL390728.6-201ENST00000566446 NYAP1Q6ZVC0 841 aa17.15■□□□□ 0.34
AL390728.6-201ENST00000566446 BCAMP50895 628 aa17.14■□□□□ 0.33
AL390728.6-201ENST00000566446 NBR1Q14596 966 aa17.13■□□□□ 0.33
AL390728.6-201ENST00000566446 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
AL390728.6-201ENST00000566446 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
AL390728.6-201ENST00000566446 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
AL390728.6-201ENST00000566446 E2F4Q16254 413 aa17.11■□□□□ 0.33
AL390728.6-201ENST00000566446 SEPT9Q9UHD8 586 aaPredicted RBP17.11■□□□□ 0.33
AL390728.6-201ENST00000566446 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
AL390728.6-201ENST00000566446 MAP3K7O43318 606 aa17.09■□□□□ 0.33
AL390728.6-201ENST00000566446 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
AL390728.6-201ENST00000566446 PACS2Q86VP3 889 aa17.06■□□□□ 0.32
AL390728.6-201ENST00000566446 WDR70Q9NW82 654 aa17.05■□□□□ 0.32
AL390728.6-201ENST00000566446 PAXIP1Q6ZW49 1069 aaPredicted RBP17.04■□□□□ 0.32
AL390728.6-201ENST00000566446 WBP1LQ9NX94 342 aa17.04■□□□□ 0.32
AL390728.6-201ENST00000566446 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
AL390728.6-201ENST00000566446 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
AL390728.6-201ENST00000566446 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
AL390728.6-201ENST00000566446 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
AL390728.6-201ENST00000566446 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
AL390728.6-201ENST00000566446 TSR3Q9UJK0 312 aaKnown RBP17■□□□□ 0.31
AL390728.6-201ENST00000566446 PRSS12P56730 875 aa16.97■□□□□ 0.31
AL390728.6-201ENST00000566446 CDCA7LQ96GN5 454 aa16.96■□□□□ 0.31
AL390728.6-201ENST00000566446 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.31
AL390728.6-201ENST00000566446 GRXCR2A6NFK2 248 aa16.94■□□□□ 0.3
AL390728.6-201ENST00000566446 PRIM1P49642 420 aaKnown RBP16.94■□□□□ 0.3
AL390728.6-201ENST00000566446 KCNC4Q03721 635 aa16.94■□□□□ 0.3
AL390728.6-201ENST00000566446 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
AL390728.6-201ENST00000566446 OSBPP22059 807 aa16.89■□□□□ 0.29
AL390728.6-201ENST00000566446 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
AL390728.6-201ENST00000566446 RBM27Q9P2N5 1060 aaKnown RBP16.87■□□□□ 0.29
AL390728.6-201ENST00000566446 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
AL390728.6-201ENST00000566446 PPP4CP60510 307 aa16.86■□□□□ 0.29
AL390728.6-201ENST00000566446 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
AL390728.6-201ENST00000566446 TATDN2Q93075 761 aa16.85■□□□□ 0.29
AL390728.6-201ENST00000566446 SMAPO00193 183 aa16.84■□□□□ 0.29
AL390728.6-201ENST00000566446 SAMD7Q7Z3H4 446 aa16.83■□□□□ 0.28
AL390728.6-201ENST00000566446 PNMA3Q9UL41 463 aa16.82■□□□□ 0.28
AL390728.6-201ENST00000566446 CDHR5Q9HBB8 845 aa16.81■□□□□ 0.28
AL390728.6-201ENST00000566446 C3orf80F5H4A9 247 aa16.8■□□□□ 0.28
AL390728.6-201ENST00000566446 NUDT18Q6ZVK8 323 aa16.75■□□□□ 0.27
AL390728.6-201ENST00000566446 TTC13Q8NBP0 860 aa16.75■□□□□ 0.27
AL390728.6-201ENST00000566446 HDGFP51858 240 aaKnown RBP16.73■□□□□ 0.27
AL390728.6-201ENST00000566446 TJAP1Q5JTD0 557 aa16.73■□□□□ 0.27
AL390728.6-201ENST00000566446 NPDC1Q9NQX5 325 aaPredicted RBP16.72■□□□□ 0.27
AL390728.6-201ENST00000566446 ARHGEF1Q92888 912 aaKnown RBP16.7■□□□□ 0.26
AL390728.6-201ENST00000566446 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
AL390728.6-201ENST00000566446 PADI6Q6TGC4 694 aa16.67■□□□□ 0.26
AL390728.6-201ENST00000566446 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
AL390728.6-201ENST00000566446 IL21Q9HBE4 155 aa16.67■□□□□ 0.26
AL390728.6-201ENST00000566446 MTRQ99707 1265 aa16.66■□□□□ 0.26
AL390728.6-201ENST00000566446 NACADO15069 1562 aa16.65■□□□□ 0.26
AL390728.6-201ENST00000566446 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
AL390728.6-201ENST00000566446 ABCC9O60706 1549 aa16.62■□□□□ 0.25
AL390728.6-201ENST00000566446 RNF40O75150 1001 aa16.61■□□□□ 0.25
AL390728.6-201ENST00000566446 SCRIBQ14160 1630 aa16.6■□□□□ 0.25
AL390728.6-201ENST00000566446 APLP1P51693 650 aa16.6■□□□□ 0.25
AL390728.6-201ENST00000566446 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
AL390728.6-201ENST00000566446 SWT1Q5T5J6 900 aaKnown RBP16.59■□□□□ 0.25
AL390728.6-201ENST00000566446 EYA1Q99502 592 aa16.59■□□□□ 0.25
AL390728.6-201ENST00000566446 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
AL390728.6-201ENST00000566446 MLLT3P42568 568 aaPredicted RBP16.57■□□□□ 0.24
AL390728.6-201ENST00000566446 LAPTM4AQ15012 233 aa16.56■□□□□ 0.24
AL390728.6-201ENST00000566446 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
AL390728.6-201ENST00000566446 SLC4A3P48751 1232 aa16.55■□□□□ 0.24
AL390728.6-201ENST00000566446 ZNF516Q92618 1163 aa16.54■□□□□ 0.24
AL390728.6-201ENST00000566446 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
AL390728.6-201ENST00000566446 Q6ZNB5 142 aa16.53■□□□□ 0.24
AL390728.6-201ENST00000566446 PTGDRQ13258 359 aa16.51■□□□□ 0.23
AL390728.6-201ENST00000566446 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.5■□□□□ 0.23
AL390728.6-201ENST00000566446 PRKD2Q9BZL6 878 aa16.49■□□□□ 0.23
AL390728.6-201ENST00000566446 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
AL390728.6-201ENST00000566446 PRR14Q9BWN1 585 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms