RNA–Protein interactions for RNA: ENST00000566375.1

LPCAT2-206, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 3

Gene LPCAT2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-206ENST00000566375 KCNK17Q96T54 332 aa13.93□□□□□ -0.18
LPCAT2-206ENST00000566375 TSR1Q2NL82 804 aaKnown RBP13.92□□□□□ -0.18
LPCAT2-206ENST00000566375 NUTM2FA1L443 756 aa13.91□□□□□ -0.18
LPCAT2-206ENST00000566375 PBX2P40425 430 aa13.91□□□□□ -0.18
LPCAT2-206ENST00000566375 C6orf132Q5T0Z8 1188 aa13.91□□□□□ -0.18
LPCAT2-206ENST00000566375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.91□□□□□ -0.18
LPCAT2-206ENST00000566375 CDHR5Q9HBB8 845 aa13.89□□□□□ -0.19
LPCAT2-206ENST00000566375 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
LPCAT2-206ENST00000566375 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
LPCAT2-206ENST00000566375 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
LPCAT2-206ENST00000566375 PSEN2P49810 448 aa13.87□□□□□ -0.19
LPCAT2-206ENST00000566375 POTEEQ6S8J3 1075 aa13.86□□□□□ -0.19
LPCAT2-206ENST00000566375 PPP1R3GB7ZBB8 358 aa13.85□□□□□ -0.19
LPCAT2-206ENST00000566375 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
LPCAT2-206ENST00000566375 COL9A1P20849 921 aa13.83□□□□□ -0.2
LPCAT2-206ENST00000566375 FCHSD2O94868 740 aa13.81□□□□□ -0.2
LPCAT2-206ENST00000566375 CERKQ8TCT0 537 aa13.81□□□□□ -0.2
LPCAT2-206ENST00000566375 DMRTA1Q5VZB9 504 aa13.8□□□□□ -0.2
LPCAT2-206ENST00000566375 PTGDRQ13258 359 aa13.79□□□□□ -0.2
LPCAT2-206ENST00000566375 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
LPCAT2-206ENST00000566375 NPDC1Q9NQX5 325 aaPredicted RBP13.77□□□□□ -0.21
LPCAT2-206ENST00000566375 KRTAP3-3Q9BYR6 98 aa13.76□□□□□ -0.21
LPCAT2-206ENST00000566375 KRTAP3-2Q9BYR7 98 aa13.76□□□□□ -0.21
LPCAT2-206ENST00000566375 GPR37O15354 613 aa13.75□□□□□ -0.21
LPCAT2-206ENST00000566375 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
LPCAT2-206ENST00000566375 HIC1Q14526 733 aa13.74□□□□□ -0.21
LPCAT2-206ENST00000566375 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
LPCAT2-206ENST00000566375 PRSS12P56730 875 aa13.73□□□□□ -0.21
LPCAT2-206ENST00000566375 PROX2Q3B8N5 592 aa13.73□□□□□ -0.21
LPCAT2-206ENST00000566375 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
LPCAT2-206ENST00000566375 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
LPCAT2-206ENST00000566375 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
LPCAT2-206ENST00000566375 GNPATO15228 680 aa13.71□□□□□ -0.21
LPCAT2-206ENST00000566375 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
LPCAT2-206ENST00000566375 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
LPCAT2-206ENST00000566375 SLC4A5Q9BY07 1137 aa13.7□□□□□ -0.22
LPCAT2-206ENST00000566375 TK2O00142 265 aa13.69□□□□□ -0.22
LPCAT2-206ENST00000566375 ADGRD1Q6QNK2 874 aa13.69□□□□□ -0.22
LPCAT2-206ENST00000566375 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
LPCAT2-206ENST00000566375 VPS9D1Q9Y2B5 631 aa13.69□□□□□ -0.22
LPCAT2-206ENST00000566375 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
LPCAT2-206ENST00000566375 PACS2Q86VP3 889 aa13.65□□□□□ -0.22
LPCAT2-206ENST00000566375 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
LPCAT2-206ENST00000566375 FECHP22830 423 aa13.64□□□□□ -0.23
LPCAT2-206ENST00000566375 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
LPCAT2-206ENST00000566375 FAM198AQ9UFP1 575 aa13.64□□□□□ -0.23
LPCAT2-206ENST00000566375 RABGEF1Q9UJ41 708 aa13.64□□□□□ -0.23
LPCAT2-206ENST00000566375 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
LPCAT2-206ENST00000566375 ZMYND10O75800 440 aa13.63□□□□□ -0.23
LPCAT2-206ENST00000566375 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
LPCAT2-206ENST00000566375 TTC13Q8NBP0 860 aa13.63□□□□□ -0.23
LPCAT2-206ENST00000566375 NBPF3Q9H094 633 aa13.62□□□□□ -0.23
LPCAT2-206ENST00000566375 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
LPCAT2-206ENST00000566375 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
LPCAT2-206ENST00000566375 KRI1Q8N9T8 703 aaKnown RBP13.6□□□□□ -0.23
LPCAT2-206ENST00000566375 PNMA3Q9UL41 463 aa13.6□□□□□ -0.23
LPCAT2-206ENST00000566375 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
LPCAT2-206ENST00000566375 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
LPCAT2-206ENST00000566375 SEPT9Q9UHD8 586 aaPredicted RBP13.58□□□□□ -0.24
LPCAT2-206ENST00000566375 SMAPO00193 183 aa13.57□□□□□ -0.24
LPCAT2-206ENST00000566375 HRO43593 1189 aa13.57□□□□□ -0.24
LPCAT2-206ENST00000566375 FAM161AQ3B820 660 aa13.57□□□□□ -0.24
LPCAT2-206ENST00000566375 TATDN2Q93075 761 aa13.57□□□□□ -0.24
LPCAT2-206ENST00000566375 ADGRG1Q9Y653 693 aa13.57□□□□□ -0.24
LPCAT2-206ENST00000566375 MRPL50Q8N5N7 158 aaKnown RBP13.56□□□□□ -0.24
LPCAT2-206ENST00000566375 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
LPCAT2-206ENST00000566375 BHMG1C9JSJ3 638 aaPredicted RBP13.54□□□□□ -0.24
LPCAT2-206ENST00000566375 C3orf80F5H4A9 247 aa13.54□□□□□ -0.24
LPCAT2-206ENST00000566375 RBM46Q8TBY0 533 aaKnown RBP13.54□□□□□ -0.24
LPCAT2-206ENST00000566375 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
LPCAT2-206ENST00000566375 IRF6O14896 467 aa13.52□□□□□ -0.25
LPCAT2-206ENST00000566375 OATP04181 439 aa13.52□□□□□ -0.25
LPCAT2-206ENST00000566375 GOLGA8CPA6NN73 597 aa13.51□□□□□ -0.25
LPCAT2-206ENST00000566375 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
LPCAT2-206ENST00000566375 LAPTM4BQ86VI4 370 aa13.51□□□□□ -0.25
LPCAT2-206ENST00000566375 SLC24A3Q9HC58 644 aa13.5□□□□□ -0.25
LPCAT2-206ENST00000566375 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
LPCAT2-206ENST00000566375 EYA1Q99502 592 aa13.49□□□□□ -0.25
LPCAT2-206ENST00000566375 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
LPCAT2-206ENST00000566375 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
LPCAT2-206ENST00000566375 SPNS2Q8IVW8 549 aa13.46□□□□□ -0.25
LPCAT2-206ENST00000566375 AK7Q96M32 723 aa13.46□□□□□ -0.25
LPCAT2-206ENST00000566375 DNAJB2P25686 324 aa13.45□□□□□ -0.26
LPCAT2-206ENST00000566375 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
LPCAT2-206ENST00000566375 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
LPCAT2-206ENST00000566375 RCCD1A6NED2 376 aa13.44□□□□□ -0.26
LPCAT2-206ENST00000566375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
LPCAT2-206ENST00000566375 ANKK1Q8NFD2 765 aa13.43□□□□□ -0.26
LPCAT2-206ENST00000566375 WNT2BQ93097 391 aa13.42□□□□□ -0.26
LPCAT2-206ENST00000566375 NLRP7Q8WX94 980 aa13.41□□□□□ -0.26
LPCAT2-206ENST00000566375 PHOX2BQ99453 314 aa13.41□□□□□ -0.26
LPCAT2-206ENST00000566375 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
LPCAT2-206ENST00000566375 KCTD12Q96CX2 325 aaKnown RBP13.4□□□□□ -0.26
LPCAT2-206ENST00000566375 SAMD7Q7Z3H4 446 aa13.39□□□□□ -0.27
LPCAT2-206ENST00000566375 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
LPCAT2-206ENST00000566375 TRIM66O15016 1216 aa13.38□□□□□ -0.27
LPCAT2-206ENST00000566375 RNF40O75150 1001 aa13.38□□□□□ -0.27
LPCAT2-206ENST00000566375 SWT1Q5T5J6 900 aaKnown RBP13.38□□□□□ -0.27
LPCAT2-206ENST00000566375 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
LPCAT2-206ENST00000566375 RNF166Q96A37 237 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms