RNA–Protein interactions for RNA: ENST00000566375.1

LPCAT2-206, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 3

Gene LPCAT2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-206ENST00000566375 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
LPCAT2-206ENST00000566375 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
LPCAT2-206ENST00000566375 PHF23Q9BUL5 403 aaPredicted RBP27.1■■□□□ 1.93
LPCAT2-206ENST00000566375 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
LPCAT2-206ENST00000566375 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
LPCAT2-206ENST00000566375 FOXD1Q16676 465 aa24.83■■□□□ 1.57
LPCAT2-206ENST00000566375 ADRA2BP18089 450 aa23.91■■□□□ 1.42
LPCAT2-206ENST00000566375 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
LPCAT2-206ENST00000566375 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
LPCAT2-206ENST00000566375 MSH5O43196 834 aa22.92■■□□□ 1.26
LPCAT2-206ENST00000566375 PPP4R3CPQ6ZMV5 832 aa22.11■■□□□ 1.13
LPCAT2-206ENST00000566375 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
LPCAT2-206ENST00000566375 MAPK8IP2Q13387 824 aaPredicted RBP21.67■■□□□ 1.06
LPCAT2-206ENST00000566375 KCNA4P22459 653 aa21.64■■□□□ 1.05
LPCAT2-206ENST00000566375 NCBP3Q53F19 620 aaKnown RBP21.57■■□□□ 1.04
LPCAT2-206ENST00000566375 CNKSR2Q8WXI2 1034 aa21.48■■□□□ 1.03
LPCAT2-206ENST00000566375 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
LPCAT2-206ENST00000566375 NPM3O75607 178 aaKnown RBP21.22■□□□□ 0.99
LPCAT2-206ENST00000566375 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
LPCAT2-206ENST00000566375 HOXD11P31277 338 aaPredicted RBP20.92■□□□□ 0.94
LPCAT2-206ENST00000566375 POTEDQ86YR6 584 aa20.79■□□□□ 0.92
LPCAT2-206ENST00000566375 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
LPCAT2-206ENST00000566375 DCAF8L1A6NGE4 600 aa20.55■□□□□ 0.88
LPCAT2-206ENST00000566375 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
LPCAT2-206ENST00000566375 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
LPCAT2-206ENST00000566375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
LPCAT2-206ENST00000566375 SLC4A2P04920 1241 aa20■□□□□ 0.79
LPCAT2-206ENST00000566375 FOXD4L1Q9NU39 408 aa19.92■□□□□ 0.78
LPCAT2-206ENST00000566375 ZBTB22O15209 634 aa19.89■□□□□ 0.77
LPCAT2-206ENST00000566375 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
LPCAT2-206ENST00000566375 U3KPZ7 1027 aaPredicted RBP19.66■□□□□ 0.74
LPCAT2-206ENST00000566375 MYCNP04198 464 aaPredicted RBP19.64■□□□□ 0.73
LPCAT2-206ENST00000566375 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
LPCAT2-206ENST00000566375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
LPCAT2-206ENST00000566375 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
LPCAT2-206ENST00000566375 C1QBPQ07021 282 aaKnown RBP19.39■□□□□ 0.69
LPCAT2-206ENST00000566375 SAMD1Q6SPF0 538 aaPredicted RBP19.38■□□□□ 0.69
LPCAT2-206ENST00000566375 APLP2Q06481 763 aa19.26■□□□□ 0.67
LPCAT2-206ENST00000566375 ATXN8OSP0DMR3 200 aa19.19■□□□□ 0.66
LPCAT2-206ENST00000566375 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
LPCAT2-206ENST00000566375 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
LPCAT2-206ENST00000566375 CAPN15O75808 1086 aa19.08■□□□□ 0.64
LPCAT2-206ENST00000566375 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
LPCAT2-206ENST00000566375 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
LPCAT2-206ENST00000566375 ZNF219Q9P2Y4 722 aaPredicted RBP18.97■□□□□ 0.63
LPCAT2-206ENST00000566375 ABCB7O75027 752 aa18.71■□□□□ 0.59
LPCAT2-206ENST00000566375 DSG3P32926 999 aa18.68■□□□□ 0.58
LPCAT2-206ENST00000566375 POLA2Q14181 598 aa18.64■□□□□ 0.57
LPCAT2-206ENST00000566375 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
LPCAT2-206ENST00000566375 FBLN2P98095 1184 aa18.33■□□□□ 0.52
LPCAT2-206ENST00000566375 MKRN4PQ13434 485 aaPredicted RBP18.23■□□□□ 0.51
LPCAT2-206ENST00000566375 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
LPCAT2-206ENST00000566375 FKBP8Q14318 412 aa17.96■□□□□ 0.47
LPCAT2-206ENST00000566375 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
LPCAT2-206ENST00000566375 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
LPCAT2-206ENST00000566375 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
LPCAT2-206ENST00000566375 SPDYE2Q495Y8 402 aa17.86■□□□□ 0.45
LPCAT2-206ENST00000566375 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
LPCAT2-206ENST00000566375 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
LPCAT2-206ENST00000566375 SSUH2Q9Y2M2 353 aa17.7■□□□□ 0.42
LPCAT2-206ENST00000566375 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
LPCAT2-206ENST00000566375 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
LPCAT2-206ENST00000566375 PROM2Q8N271 834 aa17.53■□□□□ 0.4
LPCAT2-206ENST00000566375 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
LPCAT2-206ENST00000566375 SPDYE1Q8NFV5 336 aaPredicted RBP17.34■□□□□ 0.37
LPCAT2-206ENST00000566375 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
LPCAT2-206ENST00000566375 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
LPCAT2-206ENST00000566375 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
LPCAT2-206ENST00000566375 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
LPCAT2-206ENST00000566375 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
LPCAT2-206ENST00000566375 VASPP50552 380 aaPredicted RBP17.07■□□□□ 0.32
LPCAT2-206ENST00000566375 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
LPCAT2-206ENST00000566375 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
LPCAT2-206ENST00000566375 MIER1Q8N108 512 aa16.97■□□□□ 0.31
LPCAT2-206ENST00000566375 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
LPCAT2-206ENST00000566375 FXR2P51116 673 aaKnown RBP eCLIP16.88■□□□□ 0.29
LPCAT2-206ENST00000566375 CREBZFQ9NS37 354 aa16.87■□□□□ 0.29
LPCAT2-206ENST00000566375 PIP4P2Q8N4L2 257 aa16.85■□□□□ 0.29
LPCAT2-206ENST00000566375 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
LPCAT2-206ENST00000566375 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
LPCAT2-206ENST00000566375 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
LPCAT2-206ENST00000566375 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
LPCAT2-206ENST00000566375 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
LPCAT2-206ENST00000566375 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
LPCAT2-206ENST00000566375 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
LPCAT2-206ENST00000566375 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
LPCAT2-206ENST00000566375 SPOCK2Q92563 424 aa16.63■□□□□ 0.25
LPCAT2-206ENST00000566375 NUBP1P53384 320 aa16.49■□□□□ 0.23
LPCAT2-206ENST00000566375 POTEHQ6S545 545 aa16.49■□□□□ 0.23
LPCAT2-206ENST00000566375 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
LPCAT2-206ENST00000566375 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
LPCAT2-206ENST00000566375 FAM212AQ96EL1 285 aa16.43■□□□□ 0.22
LPCAT2-206ENST00000566375 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
LPCAT2-206ENST00000566375 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
LPCAT2-206ENST00000566375 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
LPCAT2-206ENST00000566375 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
LPCAT2-206ENST00000566375 TSPYL2Q9H2G4 693 aaPredicted RBP16.37■□□□□ 0.21
LPCAT2-206ENST00000566375 GSE1Q14687 1217 aa16.36■□□□□ 0.21
LPCAT2-206ENST00000566375 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
LPCAT2-206ENST00000566375 HAX1O00165 279 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms