RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CADPS2Q86UW7 1296 aa7.63□□□□□ -1.19
SMG1-212ENST00000566328 EPAS1Q99814 870 aa7.63□□□□□ -1.19
SMG1-212ENST00000566328 CAMK2BQ13554 666 aa7.62□□□□□ -1.19
SMG1-212ENST00000566328 ANKK1Q8NFD2 765 aa7.62□□□□□ -1.19
SMG1-212ENST00000566328 ONECUT3O60422 494 aaPredicted RBP7.61□□□□□ -1.19
SMG1-212ENST00000566328 LAPTM4BQ86VI4 370 aa7.61□□□□□ -1.19
SMG1-212ENST00000566328 BBXQ8WY36 941 aaPredicted RBP7.61□□□□□ -1.19
SMG1-212ENST00000566328 DPYSL4O14531 572 aa7.59□□□□□ -1.19
SMG1-212ENST00000566328 COL9A1P20849 921 aa7.59□□□□□ -1.19
SMG1-212ENST00000566328 PROX2Q3B8N5 592 aa7.59□□□□□ -1.19
SMG1-212ENST00000566328 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
SMG1-212ENST00000566328 NYAP1Q6ZVC0 841 aa7.58□□□□□ -1.2
SMG1-212ENST00000566328 KIAA1468Q9P260 1216 aa7.57□□□□□ -1.2
SMG1-212ENST00000566328 SOWAHBA6NEL2 793 aa7.55□□□□□ -1.2
SMG1-212ENST00000566328 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
SMG1-212ENST00000566328 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
SMG1-212ENST00000566328 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.55□□□□□ -1.2
SMG1-212ENST00000566328 SPDYE16A6NNV3 312 aaPredicted RBP7.54□□□□□ -1.2
SMG1-212ENST00000566328 TRIM6-TRIM34B2RNG4 842 aa7.54□□□□□ -1.2
SMG1-212ENST00000566328 DDX12PQ92771 950 aa7.54□□□□□ -1.2
SMG1-212ENST00000566328 RBM33Q96EV2 1170 aaKnown RBP7.54□□□□□ -1.2
SMG1-212ENST00000566328 BCAMP50895 628 aa7.53□□□□□ -1.2
SMG1-212ENST00000566328 FAM98CQ17RN3 349 aaKnown RBP7.53□□□□□ -1.2
SMG1-212ENST00000566328 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
SMG1-212ENST00000566328 PACS2Q86VP3 889 aa7.52□□□□□ -1.21
SMG1-212ENST00000566328 NBR1Q14596 966 aa7.51□□□□□ -1.21
SMG1-212ENST00000566328 PDIA6Q15084 440 aa7.51□□□□□ -1.21
SMG1-212ENST00000566328 SEPT9Q9UHD8 586 aaPredicted RBP7.51□□□□□ -1.21
SMG1-212ENST00000566328 MAP3K7O43318 606 aa7.5□□□□□ -1.21
SMG1-212ENST00000566328 EN1Q05925 392 aaPredicted RBP7.5□□□□□ -1.21
SMG1-212ENST00000566328 LRCH3Q96II8 777 aa7.5□□□□□ -1.21
SMG1-212ENST00000566328 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.5□□□□□ -1.21
SMG1-212ENST00000566328 E2F4Q16254 413 aa7.49□□□□□ -1.21
SMG1-212ENST00000566328 WDR70Q9NW82 654 aa7.49□□□□□ -1.21
SMG1-212ENST00000566328 WBP1LQ9NX94 342 aa7.49□□□□□ -1.21
SMG1-212ENST00000566328 KCNC4Q03721 635 aa7.48□□□□□ -1.21
SMG1-212ENST00000566328 CERKQ8TCT0 537 aa7.48□□□□□ -1.21
SMG1-212ENST00000566328 TSR3Q9UJK0 312 aaKnown RBP7.48□□□□□ -1.21
SMG1-212ENST00000566328 AMER1Q5JTC6 1135 aaPredicted RBP7.47□□□□□ -1.21
SMG1-212ENST00000566328 Q6ZNB5 142 aa7.46□□□□□ -1.22
SMG1-212ENST00000566328 HPS5Q9UPZ3 1129 aa7.46□□□□□ -1.22
SMG1-212ENST00000566328 TSR1Q2NL82 804 aaKnown RBP7.45□□□□□ -1.22
SMG1-212ENST00000566328 ARIH1Q9Y4X5 557 aaPredicted RBP7.45□□□□□ -1.22
SMG1-212ENST00000566328 CDCA7LQ96GN5 454 aa7.44□□□□□ -1.22
SMG1-212ENST00000566328 TSKSQ9UJT2 592 aa7.44□□□□□ -1.22
SMG1-212ENST00000566328 PRSS12P56730 875 aa7.43□□□□□ -1.22
SMG1-212ENST00000566328 PPP4CP60510 307 aa7.43□□□□□ -1.22
SMG1-212ENST00000566328 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
SMG1-212ENST00000566328 HDGFP51858 240 aaKnown RBP7.42□□□□□ -1.22
SMG1-212ENST00000566328 PAXIP1Q6ZW49 1069 aaPredicted RBP7.42□□□□□ -1.22
SMG1-212ENST00000566328 CFAP44Q96MT7 982 aa7.42□□□□□ -1.22
SMG1-212ENST00000566328 NBPF26B4DH59 902 aa7.41□□□□□ -1.22
SMG1-212ENST00000566328 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
SMG1-212ENST00000566328 TATDN2Q93075 761 aa7.39□□□□□ -1.23
SMG1-212ENST00000566328 RBM27Q9P2N5 1060 aaKnown RBP7.39□□□□□ -1.23
SMG1-212ENST00000566328 NECTIN2Q92692 538 aa7.38□□□□□ -1.23
SMG1-212ENST00000566328 SMAPO00193 183 aa7.37□□□□□ -1.23
SMG1-212ENST00000566328 LCE2BO14633 110 aa7.37□□□□□ -1.23
SMG1-212ENST00000566328 PNMA3Q9UL41 463 aa7.37□□□□□ -1.23
SMG1-212ENST00000566328 OSBPP22059 807 aa7.36□□□□□ -1.23
SMG1-212ENST00000566328 LAPTM4AQ15012 233 aa7.36□□□□□ -1.23
SMG1-212ENST00000566328 SLC4A3P48751 1232 aa7.35□□□□□ -1.23
SMG1-212ENST00000566328 PRIM1P49642 420 aaKnown RBP7.34□□□□□ -1.23
SMG1-212ENST00000566328 TJAP1Q5JTD0 557 aa7.34□□□□□ -1.23
SMG1-212ENST00000566328 NUDT18Q6ZVK8 323 aa7.34□□□□□ -1.23
SMG1-212ENST00000566328 IL21Q9HBE4 155 aa7.34□□□□□ -1.23
SMG1-212ENST00000566328 FAM198AQ9UFP1 575 aa7.34□□□□□ -1.23
SMG1-212ENST00000566328 RNF40O75150 1001 aa7.33□□□□□ -1.24
SMG1-212ENST00000566328 RTN4Q9NQC3 1192 aaKnown RBP7.33□□□□□ -1.24
SMG1-212ENST00000566328 TRAF7Q6Q0C0 670 aa7.32□□□□□ -1.24
SMG1-212ENST00000566328 MTRQ99707 1265 aa7.32□□□□□ -1.24
SMG1-212ENST00000566328 CDHR5Q9HBB8 845 aa7.32□□□□□ -1.24
SMG1-212ENST00000566328 GFRA3O60609 400 aa7.31□□□□□ -1.24
SMG1-212ENST00000566328 SLF2Q8IX21 1173 aa7.31□□□□□ -1.24
SMG1-212ENST00000566328 TTC13Q8NBP0 860 aa7.3□□□□□ -1.24
SMG1-212ENST00000566328 C3orf80F5H4A9 247 aa7.29□□□□□ -1.24
SMG1-212ENST00000566328 ARHGEF1Q92888 912 aaKnown RBP7.29□□□□□ -1.24
SMG1-212ENST00000566328 PRR14Q9BWN1 585 aa7.29□□□□□ -1.24
SMG1-212ENST00000566328 GGCXP38435 758 aa7.28□□□□□ -1.24
SMG1-212ENST00000566328 PADI6Q6TGC4 694 aa7.28□□□□□ -1.24
SMG1-212ENST00000566328 NPDC1Q9NQX5 325 aaPredicted RBP7.28□□□□□ -1.24
SMG1-212ENST00000566328 V9GY48 417 aaPredicted RBP7.28□□□□□ -1.24
SMG1-212ENST00000566328 APLP1P51693 650 aa7.27□□□□□ -1.25
SMG1-212ENST00000566328 PPP1R18Q6NYC8 613 aa7.27□□□□□ -1.25
SMG1-212ENST00000566328 PRKD2Q9BZL6 878 aa7.27□□□□□ -1.25
SMG1-212ENST00000566328 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.27□□□□□ -1.25
SMG1-212ENST00000566328 NRG2O14511 850 aaPredicted RBP7.26□□□□□ -1.25
SMG1-212ENST00000566328 SWT1Q5T5J6 900 aaKnown RBP7.26□□□□□ -1.25
SMG1-212ENST00000566328 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
SMG1-212ENST00000566328 EYA1Q99502 592 aa7.24□□□□□ -1.25
SMG1-212ENST00000566328 TMUB1Q9BVT8 246 aa7.23□□□□□ -1.25
SMG1-212ENST00000566328 COPS2P61201 443 aa7.22□□□□□ -1.25
SMG1-212ENST00000566328 RBM46Q8TBY0 533 aaKnown RBP7.22□□□□□ -1.25
SMG1-212ENST00000566328 ZPR1O75312 459 aa7.21□□□□□ -1.26
SMG1-212ENST00000566328 DNAJB2P25686 324 aa7.21□□□□□ -1.26
SMG1-212ENST00000566328 PTGDRQ13258 359 aa7.21□□□□□ -1.26
SMG1-212ENST00000566328 MLLT3P42568 568 aaPredicted RBP7.2□□□□□ -1.26
SMG1-212ENST00000566328 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
SMG1-212ENST00000566328 NKX2-3Q8TAU0 364 aa7.2□□□□□ -1.26
SMG1-212ENST00000566328 KCNV2Q8TDN2 545 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms