RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
PALB2-204ENST00000566069 FBXW7Q969H0 707 aa10.49□□□□□ -0.73
PALB2-204ENST00000566069 KIAA1468Q9P260 1216 aa10.49□□□□□ -0.73
PALB2-204ENST00000566069 BCAMP50895 628 aa10.48□□□□□ -0.73
PALB2-204ENST00000566069 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
PALB2-204ENST00000566069 SOWAHBA6NEL2 793 aa10.46□□□□□ -0.73
PALB2-204ENST00000566069 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.73
PALB2-204ENST00000566069 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
PALB2-204ENST00000566069 DPYSL4O14531 572 aa10.45□□□□□ -0.74
PALB2-204ENST00000566069 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
PALB2-204ENST00000566069 ITGBL1O95965 494 aaPredicted RBP10.45□□□□□ -0.74
PALB2-204ENST00000566069 DCAF8L2P0C7V8 631 aa10.45□□□□□ -0.74
PALB2-204ENST00000566069 ZFRQ96KR1 1074 aaKnown RBP10.45□□□□□ -0.74
PALB2-204ENST00000566069 EPAS1Q99814 870 aa10.44□□□□□ -0.74
PALB2-204ENST00000566069 IRX2Q9BZI1 471 aaPredicted RBP10.43□□□□□ -0.74
PALB2-204ENST00000566069 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
PALB2-204ENST00000566069 SEPT9Q9UHD8 586 aaPredicted RBP10.42□□□□□ -0.74
PALB2-204ENST00000566069 TRIM6-TRIM34B2RNG4 842 aa10.4□□□□□ -0.74
PALB2-204ENST00000566069 DDX12PQ92771 950 aa10.4□□□□□ -0.74
PALB2-204ENST00000566069 RBM33Q96EV2 1170 aaKnown RBP10.4□□□□□ -0.74
PALB2-204ENST00000566069 FAM98CQ17RN3 349 aaKnown RBP10.36□□□□□ -0.75
PALB2-204ENST00000566069 NYAP1Q6ZVC0 841 aa10.35□□□□□ -0.75
PALB2-204ENST00000566069 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
PALB2-204ENST00000566069 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
PALB2-204ENST00000566069 KCNC4Q03721 635 aa10.33□□□□□ -0.76
PALB2-204ENST00000566069 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
PALB2-204ENST00000566069 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
PALB2-204ENST00000566069 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
PALB2-204ENST00000566069 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
PALB2-204ENST00000566069 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
PALB2-204ENST00000566069 NBR1Q14596 966 aa10.3□□□□□ -0.76
PALB2-204ENST00000566069 PDIA6Q15084 440 aa10.3□□□□□ -0.76
PALB2-204ENST00000566069 FAM198AQ9UFP1 575 aa10.3□□□□□ -0.76
PALB2-204ENST00000566069 C3orf80F5H4A9 247 aa10.29□□□□□ -0.76
PALB2-204ENST00000566069 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
PALB2-204ENST00000566069 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
PALB2-204ENST00000566069 MAP3K7O43318 606 aa10.27□□□□□ -0.77
PALB2-204ENST00000566069 PACS2Q86VP3 889 aa10.27□□□□□ -0.77
PALB2-204ENST00000566069 SMAPO00193 183 aa10.26□□□□□ -0.77
PALB2-204ENST00000566069 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
PALB2-204ENST00000566069 SPDYE16A6NNV3 312 aaPredicted RBP10.24□□□□□ -0.77
PALB2-204ENST00000566069 PRSS12P56730 875 aa10.23□□□□□ -0.77
PALB2-204ENST00000566069 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
PALB2-204ENST00000566069 SAMD7Q7Z3H4 446 aa10.23□□□□□ -0.77
PALB2-204ENST00000566069 PPP4CP60510 307 aa10.22□□□□□ -0.77
PALB2-204ENST00000566069 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
PALB2-204ENST00000566069 LCE2BO14633 110 aa10.2□□□□□ -0.78
PALB2-204ENST00000566069 E2F4Q16254 413 aa10.2□□□□□ -0.78
PALB2-204ENST00000566069 Q6ZNB5 142 aa10.2□□□□□ -0.78
PALB2-204ENST00000566069 TATDN2Q93075 761 aa10.2□□□□□ -0.78
PALB2-204ENST00000566069 GRXCR2A6NFK2 248 aa10.19□□□□□ -0.78
PALB2-204ENST00000566069 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
PALB2-204ENST00000566069 OSBPP22059 807 aa10.18□□□□□ -0.78
PALB2-204ENST00000566069 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
PALB2-204ENST00000566069 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
PALB2-204ENST00000566069 PNMA3Q9UL41 463 aa10.16□□□□□ -0.78
PALB2-204ENST00000566069 ZNF516Q92618 1163 aa10.14□□□□□ -0.79
PALB2-204ENST00000566069 MTRQ99707 1265 aa10.14□□□□□ -0.79
PALB2-204ENST00000566069 NUDT18Q6ZVK8 323 aa10.13□□□□□ -0.79
PALB2-204ENST00000566069 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
PALB2-204ENST00000566069 NPDC1Q9NQX5 325 aaPredicted RBP10.12□□□□□ -0.79
PALB2-204ENST00000566069 NBPF26B4DH59 902 aa10.11□□□□□ -0.79
PALB2-204ENST00000566069 GFRA3O60609 400 aa10.11□□□□□ -0.79
PALB2-204ENST00000566069 APLP1P51693 650 aa10.11□□□□□ -0.79
PALB2-204ENST00000566069 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
PALB2-204ENST00000566069 PRKD2Q9BZL6 878 aa10.11□□□□□ -0.79
PALB2-204ENST00000566069 IL21Q9HBE4 155 aa10.11□□□□□ -0.79
PALB2-204ENST00000566069 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
PALB2-204ENST00000566069 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
PALB2-204ENST00000566069 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
PALB2-204ENST00000566069 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
PALB2-204ENST00000566069 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
PALB2-204ENST00000566069 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
PALB2-204ENST00000566069 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
PALB2-204ENST00000566069 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.06□□□□□ -0.8
PALB2-204ENST00000566069 SWT1Q5T5J6 900 aaKnown RBP10.05□□□□□ -0.8
PALB2-204ENST00000566069 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
PALB2-204ENST00000566069 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
PALB2-204ENST00000566069 V9GY48 417 aaPredicted RBP10.04□□□□□ -0.8
PALB2-204ENST00000566069 RNF40O75150 1001 aa10.03□□□□□ -0.8
PALB2-204ENST00000566069 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
PALB2-204ENST00000566069 EYA1Q99502 592 aa10.03□□□□□ -0.8
PALB2-204ENST00000566069 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
PALB2-204ENST00000566069 COPS2P61201 443 aa9.99□□□□□ -0.81
PALB2-204ENST00000566069 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.82
PALB2-204ENST00000566069 SLF2Q8IX21 1173 aa9.96□□□□□ -0.82
PALB2-204ENST00000566069 ZPR1O75312 459 aa9.95□□□□□ -0.82
PALB2-204ENST00000566069 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
PALB2-204ENST00000566069 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
PALB2-204ENST00000566069 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
PALB2-204ENST00000566069 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
PALB2-204ENST00000566069 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
PALB2-204ENST00000566069 PTGDRQ13258 359 aa9.91□□□□□ -0.82
PALB2-204ENST00000566069 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
PALB2-204ENST00000566069 TRIM67Q6ZTA4 783 aa9.91□□□□□ -0.82
PALB2-204ENST00000566069 RNF223E7ERA6 249 aa9.89□□□□□ -0.83
PALB2-204ENST00000566069 GGCXP38435 758 aa9.89□□□□□ -0.83
PALB2-204ENST00000566069 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
PALB2-204ENST00000566069 PCDHB3Q9Y5E6 796 aa9.89□□□□□ -0.83
PALB2-204ENST00000566069 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms