RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 PHF14O94880 888 aa14.53□□□□□ -0.08
AP000842.3-201ENST00000564354 TYW1BQ6NUM6 668 aa14.53□□□□□ -0.08
AP000842.3-201ENST00000564354 ANKK1Q8NFD2 765 aa14.51□□□□□ -0.09
AP000842.3-201ENST00000564354 LAPTM4BQ86VI4 370 aa14.5□□□□□ -0.09
AP000842.3-201ENST00000564354 IRX2Q9BZI1 471 aaPredicted RBP14.5□□□□□ -0.09
AP000842.3-201ENST00000564354 ITGBL1O95965 494 aaPredicted RBP14.49□□□□□ -0.09
AP000842.3-201ENST00000564354 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
AP000842.3-201ENST00000564354 SOWAHBA6NEL2 793 aa14.45□□□□□ -0.1
AP000842.3-201ENST00000564354 ONECUT3O60422 494 aaPredicted RBP14.45□□□□□ -0.1
AP000842.3-201ENST00000564354 BCAMP50895 628 aa14.44□□□□□ -0.1
AP000842.3-201ENST00000564354 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
AP000842.3-201ENST00000564354 KIAA1468Q9P260 1216 aa14.43□□□□□ -0.1
AP000842.3-201ENST00000564354 EPAS1Q99814 870 aa14.42□□□□□ -0.1
AP000842.3-201ENST00000564354 NYAP1Q6ZVC0 841 aa14.41□□□□□ -0.1
AP000842.3-201ENST00000564354 ZFRQ96KR1 1074 aaKnown RBP14.41□□□□□ -0.1
AP000842.3-201ENST00000564354 C6orf132Q5T0Z8 1188 aa14.4□□□□□ -0.1
AP000842.3-201ENST00000564354 AMER1Q5JTC6 1135 aaPredicted RBP14.38□□□□□ -0.11
AP000842.3-201ENST00000564354 TRIM6-TRIM34B2RNG4 842 aa14.35□□□□□ -0.11
AP000842.3-201ENST00000564354 DPYSL4O14531 572 aa14.35□□□□□ -0.11
AP000842.3-201ENST00000564354 WBP1LQ9NX94 342 aa14.35□□□□□ -0.11
AP000842.3-201ENST00000564354 SEPT9Q9UHD8 586 aaPredicted RBP14.35□□□□□ -0.11
AP000842.3-201ENST00000564354 RTN4Q9NQC3 1192 aaKnown RBP14.33□□□□□ -0.12
AP000842.3-201ENST00000564354 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
AP000842.3-201ENST00000564354 KCNC4Q03721 635 aa14.3□□□□□ -0.12
AP000842.3-201ENST00000564354 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
AP000842.3-201ENST00000564354 TSR3Q9UJK0 312 aaKnown RBP14.27□□□□□ -0.13
AP000842.3-201ENST00000564354 DDX12PQ92771 950 aa14.26□□□□□ -0.13
AP000842.3-201ENST00000564354 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.26□□□□□ -0.13
AP000842.3-201ENST00000564354 LRCH3Q96II8 777 aa14.25□□□□□ -0.13
AP000842.3-201ENST00000564354 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
AP000842.3-201ENST00000564354 EN1Q05925 392 aaPredicted RBP14.23□□□□□ -0.13
AP000842.3-201ENST00000564354 TSKSQ9UJT2 592 aa14.21□□□□□ -0.13
AP000842.3-201ENST00000564354 PDIA6Q15084 440 aa14.2□□□□□ -0.14
AP000842.3-201ENST00000564354 BBXQ8WY36 941 aaPredicted RBP14.2□□□□□ -0.14
AP000842.3-201ENST00000564354 NBR1Q14596 966 aa14.19□□□□□ -0.14
AP000842.3-201ENST00000564354 TSR1Q2NL82 804 aaKnown RBP14.19□□□□□ -0.14
AP000842.3-201ENST00000564354 PACS2Q86VP3 889 aa14.19□□□□□ -0.14
AP000842.3-201ENST00000564354 MAP3K7O43318 606 aa14.17□□□□□ -0.14
AP000842.3-201ENST00000564354 Q6ZNB5 142 aa14.17□□□□□ -0.14
AP000842.3-201ENST00000564354 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
AP000842.3-201ENST00000564354 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
AP000842.3-201ENST00000564354 PPP4CP60510 307 aa14.11□□□□□ -0.15
AP000842.3-201ENST00000564354 CDCA7LQ96GN5 454 aa14.11□□□□□ -0.15
AP000842.3-201ENST00000564354 PRSS12P56730 875 aa14.09□□□□□ -0.15
AP000842.3-201ENST00000564354 LAPTM4AQ15012 233 aa14.09□□□□□ -0.15
AP000842.3-201ENST00000564354 TJAP1Q5JTD0 557 aa14.09□□□□□ -0.15
AP000842.3-201ENST00000564354 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
AP000842.3-201ENST00000564354 SAMD7Q7Z3H4 446 aa14.08□□□□□ -0.16
AP000842.3-201ENST00000564354 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
AP000842.3-201ENST00000564354 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
AP000842.3-201ENST00000564354 SMAPO00193 183 aa14.06□□□□□ -0.16
AP000842.3-201ENST00000564354 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
AP000842.3-201ENST00000564354 ARIH1Q9Y4X5 557 aaPredicted RBP14.05□□□□□ -0.16
AP000842.3-201ENST00000564354 C3orf80F5H4A9 247 aa14.04□□□□□ -0.16
AP000842.3-201ENST00000564354 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
AP000842.3-201ENST00000564354 TATDN2Q93075 761 aa14.02□□□□□ -0.17
AP000842.3-201ENST00000564354 CFAP44Q96MT7 982 aa14.02□□□□□ -0.17
AP000842.3-201ENST00000564354 LCE2BO14633 110 aa14.01□□□□□ -0.17
AP000842.3-201ENST00000564354 MTRQ99707 1265 aa14.01□□□□□ -0.17
AP000842.3-201ENST00000564354 E2F4Q16254 413 aa14□□□□□ -0.17
AP000842.3-201ENST00000564354 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
AP000842.3-201ENST00000564354 IL21Q9HBE4 155 aa14□□□□□ -0.17
AP000842.3-201ENST00000564354 PNMA3Q9UL41 463 aa14□□□□□ -0.17
AP000842.3-201ENST00000564354 GFRA3O60609 400 aa13.99□□□□□ -0.17
AP000842.3-201ENST00000564354 RBM27Q9P2N5 1060 aaKnown RBP13.98□□□□□ -0.17
AP000842.3-201ENST00000564354 GRXCR2A6NFK2 248 aa13.97□□□□□ -0.17
AP000842.3-201ENST00000564354 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
AP000842.3-201ENST00000564354 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
AP000842.3-201ENST00000564354 TRAF7Q6Q0C0 670 aa13.95□□□□□ -0.18
AP000842.3-201ENST00000564354 CDHR5Q9HBB8 845 aa13.95□□□□□ -0.18
AP000842.3-201ENST00000564354 OSBPP22059 807 aa13.94□□□□□ -0.18
AP000842.3-201ENST00000564354 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
AP000842.3-201ENST00000564354 NUDT18Q6ZVK8 323 aa13.93□□□□□ -0.18
AP000842.3-201ENST00000564354 NRG2O14511 850 aaPredicted RBP13.92□□□□□ -0.18
AP000842.3-201ENST00000564354 ZNF516Q92618 1163 aa13.92□□□□□ -0.18
AP000842.3-201ENST00000564354 APLP1P51693 650 aa13.91□□□□□ -0.18
AP000842.3-201ENST00000564354 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
AP000842.3-201ENST00000564354 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
AP000842.3-201ENST00000564354 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.9□□□□□ -0.18
AP000842.3-201ENST00000564354 RNF40O75150 1001 aa13.87□□□□□ -0.19
AP000842.3-201ENST00000564354 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
AP000842.3-201ENST00000564354 WDR70Q9NW82 654 aa13.86□□□□□ -0.19
AP000842.3-201ENST00000564354 NPDC1Q9NQX5 325 aaPredicted RBP13.84□□□□□ -0.19
AP000842.3-201ENST00000564354 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
AP000842.3-201ENST00000564354 SWT1Q5T5J6 900 aaKnown RBP13.82□□□□□ -0.2
AP000842.3-201ENST00000564354 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
AP000842.3-201ENST00000564354 SLF2Q8IX21 1173 aa13.82□□□□□ -0.2
AP000842.3-201ENST00000564354 GGCXP38435 758 aa13.78□□□□□ -0.2
AP000842.3-201ENST00000564354 COPS2P61201 443 aa13.77□□□□□ -0.21
AP000842.3-201ENST00000564354 TMUB1Q9BVT8 246 aa13.77□□□□□ -0.21
AP000842.3-201ENST00000564354 EYA1Q99502 592 aa13.76□□□□□ -0.21
AP000842.3-201ENST00000564354 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
AP000842.3-201ENST00000564354 ZPR1O75312 459 aa13.74□□□□□ -0.21
AP000842.3-201ENST00000564354 SLC4A3P48751 1232 aa13.72□□□□□ -0.21
AP000842.3-201ENST00000564354 PRR14Q9BWN1 585 aa13.71□□□□□ -0.21
AP000842.3-201ENST00000564354 ABCC9O60706 1549 aa13.69□□□□□ -0.22
AP000842.3-201ENST00000564354 PCDHB3Q9Y5E6 796 aa13.67□□□□□ -0.22
AP000842.3-201ENST00000564354 ZNF787Q6DD87 383 aa13.66□□□□□ -0.22
AP000842.3-201ENST00000564354 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
AP000842.3-201ENST00000564354 BLOC1S3Q6QNY0 202 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 275.1 ms