RNA–Protein interactions for RNA: ENST00000563969.5

PLEKHG4-209, Transcript of pleckstrin homology and RhoGEF domain containing G4, humanhuman

TSL 2

Gene PLEKHG4, Length 6,949 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG4-209ENST00000563969 A0A0U1RQG5 324 aaPredicted RBP21.73■■□□□ 1.07
PLEKHG4-209ENST00000563969 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
PLEKHG4-209ENST00000563969 MINK1Q8N4C8 1332 aaPredicted RBP21.73■■□□□ 1.07
PLEKHG4-209ENST00000563969 SAMD1Q6SPF0 538 aaPredicted RBP21.73■■□□□ 1.07
PLEKHG4-209ENST00000563969 L1TD1Q5T7N2 865 aaKnown RBP21.72■■□□□ 1.07
PLEKHG4-209ENST00000563969 ATF3P18847 181 aa21.72■■□□□ 1.07
PLEKHG4-209ENST00000563969 PTPRGP23470 1445 aa21.71■■□□□ 1.07
PLEKHG4-209ENST00000563969 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
PLEKHG4-209ENST00000563969 TERF2IPQ9NYB0 399 aa21.69■■□□□ 1.06
PLEKHG4-209ENST00000563969 CEP89Q96ST8 783 aa21.68■■□□□ 1.06
PLEKHG4-209ENST00000563969 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
PLEKHG4-209ENST00000563969 TRIM34Q9BYJ4 488 aa21.68■■□□□ 1.06
PLEKHG4-209ENST00000563969 TCEAL9Q9UHQ7 104 aa21.68■■□□□ 1.06
PLEKHG4-209ENST00000563969 MS4A1P11836 297 aa21.67■■□□□ 1.06
PLEKHG4-209ENST00000563969 NECTIN2Q92692 538 aa21.67■■□□□ 1.06
PLEKHG4-209ENST00000563969 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
PLEKHG4-209ENST00000563969 C1orf141Q5JVX7 400 aa21.65■■□□□ 1.06
PLEKHG4-209ENST00000563969 STK31Q9BXU1 1019 aa21.65■■□□□ 1.06
PLEKHG4-209ENST00000563969 HSCBQ8IWL3 235 aa21.64■■□□□ 1.06
PLEKHG4-209ENST00000563969 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
PLEKHG4-209ENST00000563969 ELL2O00472 640 aaPredicted RBP21.6■■□□□ 1.05
PLEKHG4-209ENST00000563969 SETD5Q9C0A6 1442 aa21.59■■□□□ 1.05
PLEKHG4-209ENST00000563969 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
PLEKHG4-209ENST00000563969 TRIM6-TRIM34B2RNG4 842 aa21.59■■□□□ 1.05
PLEKHG4-209ENST00000563969 KTN1Q86UP2 1357 aaKnown RBP21.58■■□□□ 1.05
PLEKHG4-209ENST00000563969 EIF2S2P20042 333 aaKnown RBP21.58■■□□□ 1.05
PLEKHG4-209ENST00000563969 PES1O00541 588 aaKnown RBP21.58■■□□□ 1.05
PLEKHG4-209ENST00000563969 NOL8Q76FK4 1167 aaKnown RBP21.57■■□□□ 1.04
PLEKHG4-209ENST00000563969 EIF3AQ14152 1382 aaKnown RBP21.56■■□□□ 1.04
PLEKHG4-209ENST00000563969 COG3Q96JB2 828 aa21.55■■□□□ 1.04
PLEKHG4-209ENST00000563969 STRN4Q9NRL3 753 aa21.55■■□□□ 1.04
PLEKHG4-209ENST00000563969 ARID3AQ99856 593 aa21.54■■□□□ 1.04
PLEKHG4-209ENST00000563969 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
PLEKHG4-209ENST00000563969 SF3B2Q13435 895 aaKnown RBP21.53■■□□□ 1.04
PLEKHG4-209ENST00000563969 TTC5Q8N0Z6 440 aa21.52■■□□□ 1.04
PLEKHG4-209ENST00000563969 GPATCH3Q96I76 525 aa21.52■■□□□ 1.04
PLEKHG4-209ENST00000563969 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.04
PLEKHG4-209ENST00000563969 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.04
PLEKHG4-209ENST00000563969 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
PLEKHG4-209ENST00000563969 FAM177BA6PVY3 158 aa21.51■■□□□ 1.03
PLEKHG4-209ENST00000563969 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
PLEKHG4-209ENST00000563969 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
PLEKHG4-209ENST00000563969 CALD1Q05682 793 aaKnown RBP21.48■■□□□ 1.03
PLEKHG4-209ENST00000563969 NOL10Q9BSC4 688 aaKnown RBP21.48■■□□□ 1.03
PLEKHG4-209ENST00000563969 DHX16O60231 1041 aaKnown RBP21.47■■□□□ 1.03
PLEKHG4-209ENST00000563969 IPO8O15397 1037 aaKnown RBP21.47■■□□□ 1.03
PLEKHG4-209ENST00000563969 ESCO1Q5FWF5 840 aa21.47■■□□□ 1.03
PLEKHG4-209ENST00000563969 TEFQ10587 303 aa21.47■■□□□ 1.03
PLEKHG4-209ENST00000563969 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
PLEKHG4-209ENST00000563969 VGFO15240 615 aaPredicted RBP21.46■■□□□ 1.03
PLEKHG4-209ENST00000563969 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
PLEKHG4-209ENST00000563969 ZNF428Q96B54 188 aa21.45■■□□□ 1.02
PLEKHG4-209ENST00000563969 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
PLEKHG4-209ENST00000563969 NLRP2Q9NX02 1062 aa21.45■■□□□ 1.02
PLEKHG4-209ENST00000563969 RAB3GAP2Q9H2M9 1393 aa21.44■■□□□ 1.02
PLEKHG4-209ENST00000563969 TCERG1O14776 1098 aaKnown RBP21.43■■□□□ 1.02
PLEKHG4-209ENST00000563969 TPM4P67936 248 aa21.43■■□□□ 1.02
PLEKHG4-209ENST00000563969 VPS37DQ86XT2 251 aa21.43■■□□□ 1.02
PLEKHG4-209ENST00000563969 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
PLEKHG4-209ENST00000563969 CCDC34Q96HJ3 373 aa21.42■■□□□ 1.02
PLEKHG4-209ENST00000563969 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
PLEKHG4-209ENST00000563969 HTATSF1O43719 755 aaKnown RBP21.4■■□□□ 1.02
PLEKHG4-209ENST00000563969 NOP58Q9Y2X3 529 aaKnown RBP21.4■■□□□ 1.02
PLEKHG4-209ENST00000563969 DEKP35659 375 aaKnown RBP21.39■■□□□ 1.02
PLEKHG4-209ENST00000563969 AMOTL1Q8IY63 956 aa21.39■■□□□ 1.01
PLEKHG4-209ENST00000563969 PMFBP1Q8TBY8 1022 aa21.39■■□□□ 1.01
PLEKHG4-209ENST00000563969 TPD52L1Q16890 204 aaPredicted RBP21.39■■□□□ 1.01
PLEKHG4-209ENST00000563969 RSPH4AQ5TD94 716 aa21.39■■□□□ 1.01
PLEKHG4-209ENST00000563969 BCL2L13Q9BXK5 485 aa21.39■■□□□ 1.01
PLEKHG4-209ENST00000563969 CCAR1Q8IX12 1150 aaKnown RBP21.38■■□□□ 1.01
PLEKHG4-209ENST00000563969 TXNDC2Q86VQ3 553 aa21.38■■□□□ 1.01
PLEKHG4-209ENST00000563969 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
PLEKHG4-209ENST00000563969 AKAP17AQ02040 695 aaKnown RBP21.37■■□□□ 1.01
PLEKHG4-209ENST00000563969 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
PLEKHG4-209ENST00000563969 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
PLEKHG4-209ENST00000563969 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 FOXD4L1Q9NU39 408 aa21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 SF3A1Q15459 793 aaKnown RBP21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 FOXD4L5Q5VV16 416 aaPredicted RBP21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 FOXD4L4Q8WXT5 416 aaPredicted RBP21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 GZF1Q9H116 711 aaPredicted RBP21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 PANK3Q9H999 370 aa21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.36■■□□□ 1.019e-8■■■■■ 628.2
PLEKHG4-209ENST00000563969 SLC4A3P48751 1232 aa21.36■■□□□ 1.01
PLEKHG4-209ENST00000563969 AIMP1Q12904 312 aaKnown RBP21.35■■□□□ 1.01
PLEKHG4-209ENST00000563969 CCDC43Q96MW1 224 aaKnown RBP21.35■■□□□ 1.01
PLEKHG4-209ENST00000563969 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
PLEKHG4-209ENST00000563969 ZNF644Q9H582 1327 aaPredicted RBP21.34■■□□□ 1.01
PLEKHG4-209ENST00000563969 PAF1Q8N7H5 531 aa21.34■■□□□ 1.01
PLEKHG4-209ENST00000563969 RBM42Q9BTD8 480 aaKnown RBP21.33■■□□□ 1.01
PLEKHG4-209ENST00000563969 PLIN1O60240 522 aa21.33■■□□□ 1.01
PLEKHG4-209ENST00000563969 FYB1O15117 783 aa21.33■■□□□ 1
PLEKHG4-209ENST00000563969 SMARCA4P51532 1647 aa21.33■■□□□ 1
PLEKHG4-209ENST00000563969 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1
PLEKHG4-209ENST00000563969 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1
PLEKHG4-209ENST00000563969 ST20-MTHFSA0A0A6YYL1 179 aa21.32■■□□□ 1
PLEKHG4-209ENST00000563969 HMOX1P09601 288 aa21.32■■□□□ 1
PLEKHG4-209ENST00000563969 PATL2C9JE40 543 aaKnown RBP21.32■■□□□ 1
PLEKHG4-209ENST00000563969 AFAP1Q8N556 730 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms