RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
CDR2-203ENST00000563573 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
CDR2-203ENST00000563573 NBPF3Q9H094 633 aa9.33□□□□□ -0.92
CDR2-203ENST00000563573 PDIA6Q15084 440 aa9.32□□□□□ -0.92
CDR2-203ENST00000563573 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
CDR2-203ENST00000563573 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
CDR2-203ENST00000563573 BHMG1C9JSJ3 638 aaPredicted RBP9.3□□□□□ -0.92
CDR2-203ENST00000563573 KCTD12Q96CX2 325 aaKnown RBP9.3□□□□□ -0.92
CDR2-203ENST00000563573 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
CDR2-203ENST00000563573 RABGEF1Q9UJ41 708 aa9.29□□□□□ -0.92
CDR2-203ENST00000563573 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
CDR2-203ENST00000563573 DDX12PQ92771 950 aa9.27□□□□□ -0.93
CDR2-203ENST00000563573 COL9A1P20849 921 aa9.25□□□□□ -0.93
CDR2-203ENST00000563573 EN1Q05925 392 aaPredicted RBP9.24□□□□□ -0.93
CDR2-203ENST00000563573 NBR1Q14596 966 aa9.24□□□□□ -0.93
CDR2-203ENST00000563573 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
CDR2-203ENST00000563573 WNT2BQ93097 391 aa9.24□□□□□ -0.93
CDR2-203ENST00000563573 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
CDR2-203ENST00000563573 MAP3K7O43318 606 aa9.22□□□□□ -0.93
CDR2-203ENST00000563573 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
CDR2-203ENST00000563573 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
CDR2-203ENST00000563573 PLA2G2EQ9NZK7 142 aa9.22□□□□□ -0.93
CDR2-203ENST00000563573 PROX2Q3B8N5 592 aa9.21□□□□□ -0.94
CDR2-203ENST00000563573 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
CDR2-203ENST00000563573 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
CDR2-203ENST00000563573 PTPN5P54829 565 aa9.2□□□□□ -0.94
CDR2-203ENST00000563573 ANKK1Q8NFD2 765 aa9.2□□□□□ -0.94
CDR2-203ENST00000563573 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
CDR2-203ENST00000563573 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
CDR2-203ENST00000563573 CCDC180Q9P1Z9 1646 aa9.2□□□□□ -0.94
CDR2-203ENST00000563573 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
CDR2-203ENST00000563573 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
CDR2-203ENST00000563573 FAM98CQ17RN3 349 aaKnown RBP9.15□□□□□ -0.94
CDR2-203ENST00000563573 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
CDR2-203ENST00000563573 P3H3Q8IVL6 736 aa9.15□□□□□ -0.94
CDR2-203ENST00000563573 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
CDR2-203ENST00000563573 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
CDR2-203ENST00000563573 OSBPP22059 807 aa9.13□□□□□ -0.95
CDR2-203ENST00000563573 PRSS12P56730 875 aa9.13□□□□□ -0.95
CDR2-203ENST00000563573 SOWAHBA6NEL2 793 aa9.12□□□□□ -0.95
CDR2-203ENST00000563573 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
CDR2-203ENST00000563573 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
CDR2-203ENST00000563573 PLCB2Q00722 1185 aa9.11□□□□□ -0.95
CDR2-203ENST00000563573 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
CDR2-203ENST00000563573 SEPT9Q9UHD8 586 aaPredicted RBP9.1□□□□□ -0.95
CDR2-203ENST00000563573 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
CDR2-203ENST00000563573 NBPF26B4DH59 902 aa9.09□□□□□ -0.95
CDR2-203ENST00000563573 KCNV2Q8TDN2 545 aa9.09□□□□□ -0.95
CDR2-203ENST00000563573 LRCH3Q96II8 777 aa9.08□□□□□ -0.96
CDR2-203ENST00000563573 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.08□□□□□ -0.96
CDR2-203ENST00000563573 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
CDR2-203ENST00000563573 BCAMP50895 628 aa9.07□□□□□ -0.96
CDR2-203ENST00000563573 TSR3Q9UJK0 312 aaKnown RBP9.07□□□□□ -0.96
CDR2-203ENST00000563573 HDGFP51858 240 aaKnown RBP9.06□□□□□ -0.96
CDR2-203ENST00000563573 TATDN2Q93075 761 aa9.05□□□□□ -0.96
CDR2-203ENST00000563573 RGS20O76081 388 aa9.03□□□□□ -0.96
CDR2-203ENST00000563573 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
CDR2-203ENST00000563573 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
CDR2-203ENST00000563573 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
CDR2-203ENST00000563573 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
CDR2-203ENST00000563573 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
CDR2-203ENST00000563573 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
CDR2-203ENST00000563573 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
CDR2-203ENST00000563573 PPP4CP60510 307 aa9.01□□□□□ -0.97
CDR2-203ENST00000563573 TTC13Q8NBP0 860 aa9.01□□□□□ -0.97
CDR2-203ENST00000563573 NPDC1Q9NQX5 325 aaPredicted RBP9.01□□□□□ -0.97
CDR2-203ENST00000563573 FAM198AQ9UFP1 575 aa9.01□□□□□ -0.97
CDR2-203ENST00000563573 SMAPO00193 183 aa8.99□□□□□ -0.97
CDR2-203ENST00000563573 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
CDR2-203ENST00000563573 NUDT18Q6ZVK8 323 aa8.99□□□□□ -0.97
CDR2-203ENST00000563573 SMYD5Q6GMV2 418 aa8.98□□□□□ -0.97
CDR2-203ENST00000563573 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
CDR2-203ENST00000563573 SAMD7Q7Z3H4 446 aa8.98□□□□□ -0.97
CDR2-203ENST00000563573 A0A0G2JS52 829 aa8.97□□□□□ -0.97
CDR2-203ENST00000563573 KCNC4Q03721 635 aa8.97□□□□□ -0.97
CDR2-203ENST00000563573 NUTM2FA1L443 756 aa8.95□□□□□ -0.98
CDR2-203ENST00000563573 HAP1P54257 671 aaPredicted RBP8.95□□□□□ -0.98
CDR2-203ENST00000563573 PTGDRQ13258 359 aa8.95□□□□□ -0.98
CDR2-203ENST00000563573 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
CDR2-203ENST00000563573 SEMA3EO15041 775 aa8.94□□□□□ -0.98
CDR2-203ENST00000563573 RBM46Q8TBY0 533 aaKnown RBP8.93□□□□□ -0.98
CDR2-203ENST00000563573 C3orf80F5H4A9 247 aa8.92□□□□□ -0.98
CDR2-203ENST00000563573 FCHSD2O94868 740 aa8.92□□□□□ -0.98
CDR2-203ENST00000563573 EYA1Q99502 592 aa8.92□□□□□ -0.98
CDR2-203ENST00000563573 TESPA1A2RU30 521 aaPredicted RBP8.9□□□□□ -0.98
CDR2-203ENST00000563573 RNF40O75150 1001 aa8.9□□□□□ -0.98
CDR2-203ENST00000563573 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
CDR2-203ENST00000563573 DNAJB2P25686 324 aa8.89□□□□□ -0.99
CDR2-203ENST00000563573 SWT1Q5T5J6 900 aaKnown RBP8.89□□□□□ -0.99
CDR2-203ENST00000563573 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
CDR2-203ENST00000563573 HIC1Q14526 733 aa8.87□□□□□ -0.99
CDR2-203ENST00000563573 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
CDR2-203ENST00000563573 ADGRG1Q9Y653 693 aa8.87□□□□□ -0.99
CDR2-203ENST00000563573 OATP04181 439 aa8.86□□□□□ -0.99
CDR2-203ENST00000563573 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
CDR2-203ENST00000563573 APLP1P51693 650 aa8.84□□□□□ -0.99
CDR2-203ENST00000563573 MTRQ99707 1265 aa8.84□□□□□ -0.99
CDR2-203ENST00000563573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.83□□□□□ -1
CDR2-203ENST00000563573 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
CDR2-203ENST00000563573 RCCD1A6NED2 376 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms