RNA–Protein interactions for RNA: ENST00000563246.1

SCAPER-206, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-206ENST00000563246 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
SCAPER-206ENST00000563246 THSD4Q6ZMP0 1018 aa11.96□□□□□ -0.49
SCAPER-206ENST00000563246 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
SCAPER-206ENST00000563246 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
SCAPER-206ENST00000563246 CUX2O14529 1486 aa11.95□□□□□ -0.5
SCAPER-206ENST00000563246 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
SCAPER-206ENST00000563246 CAMK2BQ13554 666 aa11.95□□□□□ -0.5
SCAPER-206ENST00000563246 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
SCAPER-206ENST00000563246 PHF14O94880 888 aa11.94□□□□□ -0.5
SCAPER-206ENST00000563246 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
SCAPER-206ENST00000563246 CADPS2Q86UW7 1296 aa11.94□□□□□ -0.5
SCAPER-206ENST00000563246 PTPN5P54829 565 aa11.92□□□□□ -0.5
SCAPER-206ENST00000563246 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
SCAPER-206ENST00000563246 WNT2BQ93097 391 aa11.92□□□□□ -0.5
SCAPER-206ENST00000563246 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
SCAPER-206ENST00000563246 EPAS1Q99814 870 aa11.88□□□□□ -0.51
SCAPER-206ENST00000563246 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
SCAPER-206ENST00000563246 ONECUT3O60422 494 aaPredicted RBP11.86□□□□□ -0.51
SCAPER-206ENST00000563246 RGS20O76081 388 aa11.86□□□□□ -0.51
SCAPER-206ENST00000563246 LAPTM4BQ86VI4 370 aa11.85□□□□□ -0.51
SCAPER-206ENST00000563246 COL9A1P20849 921 aa11.84□□□□□ -0.51
SCAPER-206ENST00000563246 DPYSL4O14531 572 aa11.82□□□□□ -0.52
SCAPER-206ENST00000563246 PROX2Q3B8N5 592 aa11.82□□□□□ -0.52
SCAPER-206ENST00000563246 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
SCAPER-206ENST00000563246 C6orf132Q5T0Z8 1188 aa11.8□□□□□ -0.52
SCAPER-206ENST00000563246 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
SCAPER-206ENST00000563246 A0A0G2JS52 829 aa11.77□□□□□ -0.53
SCAPER-206ENST00000563246 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
SCAPER-206ENST00000563246 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
SCAPER-206ENST00000563246 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
SCAPER-206ENST00000563246 PDIA6Q15084 440 aa11.75□□□□□ -0.53
SCAPER-206ENST00000563246 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
SCAPER-206ENST00000563246 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
SCAPER-206ENST00000563246 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
SCAPER-206ENST00000563246 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
SCAPER-206ENST00000563246 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
SCAPER-206ENST00000563246 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
SCAPER-206ENST00000563246 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
SCAPER-206ENST00000563246 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
SCAPER-206ENST00000563246 DDX12PQ92771 950 aa11.71□□□□□ -0.53
SCAPER-206ENST00000563246 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
SCAPER-206ENST00000563246 BCAMP50895 628 aa11.7□□□□□ -0.54
SCAPER-206ENST00000563246 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
SCAPER-206ENST00000563246 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
SCAPER-206ENST00000563246 NBR1Q14596 966 aa11.68□□□□□ -0.54
SCAPER-206ENST00000563246 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
SCAPER-206ENST00000563246 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
SCAPER-206ENST00000563246 MAP3K7O43318 606 aa11.65□□□□□ -0.54
SCAPER-206ENST00000563246 E2F4Q16254 413 aa11.65□□□□□ -0.54
SCAPER-206ENST00000563246 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
SCAPER-206ENST00000563246 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
SCAPER-206ENST00000563246 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
SCAPER-206ENST00000563246 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
SCAPER-206ENST00000563246 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
SCAPER-206ENST00000563246 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
SCAPER-206ENST00000563246 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
SCAPER-206ENST00000563246 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
SCAPER-206ENST00000563246 TSKSQ9UJT2 592 aa11.61□□□□□ -0.55
SCAPER-206ENST00000563246 KCNC4Q03721 635 aa11.6□□□□□ -0.55
SCAPER-206ENST00000563246 IRX2Q9BZI1 471 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-206ENST00000563246 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
SCAPER-206ENST00000563246 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
SCAPER-206ENST00000563246 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
SCAPER-206ENST00000563246 HPS5Q9UPZ3 1129 aa11.58□□□□□ -0.56
SCAPER-206ENST00000563246 NESP48681 1621 aa11.57□□□□□ -0.56
SCAPER-206ENST00000563246 PRSS12P56730 875 aa11.57□□□□□ -0.56
SCAPER-206ENST00000563246 THOC2Q8NI27 1593 aaKnown RBP11.56□□□□□ -0.56
SCAPER-206ENST00000563246 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
SCAPER-206ENST00000563246 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
SCAPER-206ENST00000563246 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
SCAPER-206ENST00000563246 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
SCAPER-206ENST00000563246 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
SCAPER-206ENST00000563246 GRXCR2A6NFK2 248 aa11.52□□□□□ -0.57
SCAPER-206ENST00000563246 PPP4CP60510 307 aa11.52□□□□□ -0.57
SCAPER-206ENST00000563246 OSBPP22059 807 aa11.5□□□□□ -0.57
SCAPER-206ENST00000563246 PRIM1P49642 420 aaKnown RBP11.5□□□□□ -0.57
SCAPER-206ENST00000563246 TATDN2Q93075 761 aa11.5□□□□□ -0.57
SCAPER-206ENST00000563246 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
SCAPER-206ENST00000563246 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
SCAPER-206ENST00000563246 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
SCAPER-206ENST00000563246 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
SCAPER-206ENST00000563246 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
SCAPER-206ENST00000563246 SMAPO00193 183 aa11.46□□□□□ -0.57
SCAPER-206ENST00000563246 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
SCAPER-206ENST00000563246 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
SCAPER-206ENST00000563246 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
SCAPER-206ENST00000563246 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
SCAPER-206ENST00000563246 CDHR5Q9HBB8 845 aa11.44□□□□□ -0.58
SCAPER-206ENST00000563246 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
SCAPER-206ENST00000563246 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
SCAPER-206ENST00000563246 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
SCAPER-206ENST00000563246 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
SCAPER-206ENST00000563246 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
SCAPER-206ENST00000563246 BAZ1BQ9UIG0 1483 aaKnown RBP11.41□□□□□ -0.58
SCAPER-206ENST00000563246 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
SCAPER-206ENST00000563246 LAPTM4AQ15012 233 aa11.39□□□□□ -0.59
SCAPER-206ENST00000563246 ARHGEF1Q92888 912 aaKnown RBP11.38□□□□□ -0.59
SCAPER-206ENST00000563246 MTRQ99707 1265 aa11.38□□□□□ -0.59
SCAPER-206ENST00000563246 NPDC1Q9NQX5 325 aaPredicted RBP11.38□□□□□ -0.59
SCAPER-206ENST00000563246 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms