RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PPP1R3GB7ZBB8 358 aa7.02□□□□□ -1.29
CHD9-207ENST00000562806 RBM33Q96EV2 1170 aaKnown RBP7.02□□□□□ -1.29
CHD9-207ENST00000562806 ONECUT3O60422 494 aaPredicted RBP7.01□□□□□ -1.29
CHD9-207ENST00000562806 LMOD2Q6P5Q4 547 aa7.01□□□□□ -1.29
CHD9-207ENST00000562806 SLC4A5Q9BY07 1137 aa7.01□□□□□ -1.29
CHD9-207ENST00000562806 NUTM2FA1L443 756 aa7□□□□□ -1.29
CHD9-207ENST00000562806 FCHSD2O94868 740 aa7□□□□□ -1.29
CHD9-207ENST00000562806 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
CHD9-207ENST00000562806 RBM27Q9P2N5 1060 aaKnown RBP7□□□□□ -1.29
CHD9-207ENST00000562806 TK2O00142 265 aa6.99□□□□□ -1.29
CHD9-207ENST00000562806 HIC1Q14526 733 aa6.99□□□□□ -1.29
CHD9-207ENST00000562806 KCNK17Q96T54 332 aa6.99□□□□□ -1.29
CHD9-207ENST00000562806 RBM26Q5T8P6 1007 aaKnown RBP6.98□□□□□ -1.29
CHD9-207ENST00000562806 CDAN1Q8IWY9 1227 aa6.98□□□□□ -1.29
CHD9-207ENST00000562806 POTEB3A0JP26 581 aa6.97□□□□□ -1.29
CHD9-207ENST00000562806 PTGDRQ13258 359 aa6.97□□□□□ -1.29
CHD9-207ENST00000562806 POTEBQ6S5H4 581 aa6.97□□□□□ -1.29
CHD9-207ENST00000562806 LSM11P83369 360 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD9-207ENST00000562806 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
CHD9-207ENST00000562806 GNPATO15228 680 aa6.95□□□□□ -1.3
CHD9-207ENST00000562806 PRSS12P56730 875 aa6.95□□□□□ -1.3
CHD9-207ENST00000562806 PACS2Q86VP3 889 aa6.95□□□□□ -1.3
CHD9-207ENST00000562806 ZBED2Q9BTP6 218 aa6.95□□□□□ -1.3
CHD9-207ENST00000562806 PRIM1P49642 420 aaKnown RBP6.94□□□□□ -1.3
CHD9-207ENST00000562806 PSEN2P49810 448 aa6.94□□□□□ -1.3
CHD9-207ENST00000562806 CDCA7LQ96GN5 454 aa6.94□□□□□ -1.3
CHD9-207ENST00000562806 STAC3Q96MF2 364 aa6.94□□□□□ -1.3
CHD9-207ENST00000562806 NBPF3Q9H094 633 aa6.94□□□□□ -1.3
CHD9-207ENST00000562806 NPDC1Q9NQX5 325 aaPredicted RBP6.94□□□□□ -1.3
CHD9-207ENST00000562806 TRIM6-TRIM34B2RNG4 842 aa6.93□□□□□ -1.3
CHD9-207ENST00000562806 POTEEQ6S8J3 1075 aa6.93□□□□□ -1.3
CHD9-207ENST00000562806 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
CHD9-207ENST00000562806 AXIN2Q9Y2T1 843 aa6.93□□□□□ -1.3
CHD9-207ENST00000562806 COL9A1P20849 921 aa6.92□□□□□ -1.3
CHD9-207ENST00000562806 ADGRD1Q6QNK2 874 aa6.92□□□□□ -1.3
CHD9-207ENST00000562806 CDHR5Q9HBB8 845 aa6.92□□□□□ -1.3
CHD9-207ENST00000562806 VPS9D1Q9Y2B5 631 aa6.92□□□□□ -1.3
CHD9-207ENST00000562806 NBPF26B4DH59 902 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 ANKRD13DQ6ZTN6 518 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 LAPTM4BQ86VI4 370 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 TTC13Q8NBP0 860 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
CHD9-207ENST00000562806 OATP04181 439 aa6.9□□□□□ -1.3
CHD9-207ENST00000562806 ZC3H15Q8WU90 426 aaKnown RBP6.9□□□□□ -1.3
CHD9-207ENST00000562806 MINK1Q8N4C8 1332 aaPredicted RBP6.9□□□□□ -1.3
CHD9-207ENST00000562806 GPR37O15354 613 aa6.89□□□□□ -1.31
CHD9-207ENST00000562806 ZMYND10O75800 440 aa6.89□□□□□ -1.31
CHD9-207ENST00000562806 MAP2K5Q13163 448 aa6.89□□□□□ -1.31
CHD9-207ENST00000562806 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
CHD9-207ENST00000562806 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
CHD9-207ENST00000562806 BARGINQ6ZT62 677 aa6.88□□□□□ -1.31
CHD9-207ENST00000562806 KRI1Q8N9T8 703 aaKnown RBP6.88□□□□□ -1.31
CHD9-207ENST00000562806 KIAA1468Q9P260 1216 aa6.88□□□□□ -1.31
CHD9-207ENST00000562806 HDGFP51858 240 aaKnown RBP6.87□□□□□ -1.31
CHD9-207ENST00000562806 PROX2Q3B8N5 592 aa6.87□□□□□ -1.31
CHD9-207ENST00000562806 MRPL50Q8N5N7 158 aaKnown RBP6.87□□□□□ -1.31
CHD9-207ENST00000562806 GOLGA8CPA6NN73 597 aa6.86□□□□□ -1.31
CHD9-207ENST00000562806 BHMG1C9JSJ3 638 aaPredicted RBP6.86□□□□□ -1.31
CHD9-207ENST00000562806 HRO43593 1189 aa6.86□□□□□ -1.31
CHD9-207ENST00000562806 SLC4A3P48751 1232 aa6.86□□□□□ -1.31
CHD9-207ENST00000562806 TATDN2Q93075 761 aa6.86□□□□□ -1.31
CHD9-207ENST00000562806 TSKSQ9UJT2 592 aa6.86□□□□□ -1.31
CHD9-207ENST00000562806 IRF6O14896 467 aa6.85□□□□□ -1.31
CHD9-207ENST00000562806 FAM98CQ17RN3 349 aaKnown RBP6.85□□□□□ -1.31
CHD9-207ENST00000562806 PNMA3Q9UL41 463 aa6.85□□□□□ -1.31
CHD9-207ENST00000562806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.84□□□□□ -1.31
CHD9-207ENST00000562806 NUDT18Q6ZVK8 323 aa6.84□□□□□ -1.31
CHD9-207ENST00000562806 NECTIN2Q92692 538 aa6.84□□□□□ -1.31
CHD9-207ENST00000562806 ADGRG1Q9Y653 693 aa6.84□□□□□ -1.31
CHD9-207ENST00000562806 DNAJB2P25686 324 aa6.83□□□□□ -1.32
CHD9-207ENST00000562806 AK7Q96M32 723 aa6.83□□□□□ -1.32
CHD9-207ENST00000562806 EYA1Q99502 592 aa6.82□□□□□ -1.32
CHD9-207ENST00000562806 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
CHD9-207ENST00000562806 ANKK1Q8NFD2 765 aa6.81□□□□□ -1.32
CHD9-207ENST00000562806 PXYLP1Q8TE99 480 aa6.81□□□□□ -1.32
CHD9-207ENST00000562806 FAM198AQ9UFP1 575 aa6.81□□□□□ -1.32
CHD9-207ENST00000562806 FECHP22830 423 aa6.8□□□□□ -1.32
CHD9-207ENST00000562806 TPRNQ4KMQ1 711 aa6.8□□□□□ -1.32
CHD9-207ENST00000562806 METTL3Q86U44 580 aaKnown RBP6.8□□□□□ -1.32
CHD9-207ENST00000562806 MYT1LQ9UL68 1186 aa6.8□□□□□ -1.32
CHD9-207ENST00000562806 SPNS2Q8IVW8 549 aa6.79□□□□□ -1.32
CHD9-207ENST00000562806 SLF2Q8IX21 1173 aa6.79□□□□□ -1.32
CHD9-207ENST00000562806 CCDC102AQ96A19 550 aa6.79□□□□□ -1.32
CHD9-207ENST00000562806 ZFRQ96KR1 1074 aaKnown RBP6.79□□□□□ -1.32
CHD9-207ENST00000562806 SEPT9Q9UHD8 586 aaPredicted RBP6.79□□□□□ -1.32
CHD9-207ENST00000562806 RCCD1A6NED2 376 aa6.78□□□□□ -1.32
CHD9-207ENST00000562806 CLCN1P35523 988 aa6.78□□□□□ -1.32
CHD9-207ENST00000562806 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
CHD9-207ENST00000562806 WNT2BQ93097 391 aa6.78□□□□□ -1.32
CHD9-207ENST00000562806 LRCH3Q96II8 777 aa6.78□□□□□ -1.32
CHD9-207ENST00000562806 NYAP1Q6ZVC0 841 aa6.77□□□□□ -1.33
CHD9-207ENST00000562806 TMEM134Q9H6X4 195 aa6.77□□□□□ -1.33
CHD9-207ENST00000562806 DAXXQ9UER7 740 aaPredicted RBP6.77□□□□□ -1.33
CHD9-207ENST00000562806 SOWAHBA6NEL2 793 aa6.76□□□□□ -1.33
CHD9-207ENST00000562806 SMAPO00193 183 aa6.76□□□□□ -1.33
CHD9-207ENST00000562806 AMHR2Q16671 573 aa6.76□□□□□ -1.33
CHD9-207ENST00000562806 SLC24A3Q9HC58 644 aa6.76□□□□□ -1.33
CHD9-207ENST00000562806 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms