RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.58
BBS4-204ENST00000562084 PNISRQ8TF01 805 aaKnown RBP24.94■■□□□ 1.58
BBS4-204ENST00000562084 KDM5CP41229 1560 aa24.94■■□□□ 1.58
BBS4-204ENST00000562084 USP47Q96K76 1375 aa24.94■■□□□ 1.58
BBS4-204ENST00000562084 BCORL1Q5H9F3 1711 aa24.93■■□□□ 1.58
BBS4-204ENST00000562084 FOXD1Q16676 465 aa24.93■■□□□ 1.58
BBS4-204ENST00000562084 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
BBS4-204ENST00000562084 PPRC1Q5VV67 1664 aaKnown RBP24.93■■□□□ 1.58
BBS4-204ENST00000562084 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
BBS4-204ENST00000562084 GPATCH8Q9UKJ3 1502 aaKnown RBP24.92■■□□□ 1.58
BBS4-204ENST00000562084 CDC42BPBQ9Y5S2 1711 aa24.91■■□□□ 1.58
BBS4-204ENST00000562084 PLCH2O75038 1416 aa24.91■■□□□ 1.58
BBS4-204ENST00000562084 MS4A1P11836 297 aa24.91■■□□□ 1.58
BBS4-204ENST00000562084 BRD4O60885 1362 aaPredicted RBP24.9■■□□□ 1.58
BBS4-204ENST00000562084 PZPP20742 1482 aa24.9■■□□□ 1.58
BBS4-204ENST00000562084 KIF15Q9NS87 1388 aa24.89■■□□□ 1.58
BBS4-204ENST00000562084 PREX2Q70Z35 1606 aa24.89■■□□□ 1.57
BBS4-204ENST00000562084 UHRF1BP1Q6BDS2 1440 aa24.88■■□□□ 1.57
BBS4-204ENST00000562084 KIAA1107Q9UPP5 1409 aa24.88■■□□□ 1.57
BBS4-204ENST00000562084 ADGBQ8N7X0 1667 aa24.88■■□□□ 1.57
BBS4-204ENST00000562084 TMC1Q8TDI8 760 aa24.87■■□□□ 1.57
BBS4-204ENST00000562084 ITSN2Q9NZM3 1697 aa24.86■■□□□ 1.57
BBS4-204ENST00000562084 RALGAPBQ86X10 1494 aa24.86■■□□□ 1.57
BBS4-204ENST00000562084 ARAP3Q8WWN8 1544 aa24.85■■□□□ 1.57
BBS4-204ENST00000562084 RRP1P56182 461 aaKnown RBP24.85■■□□□ 1.57
BBS4-204ENST00000562084 ARHGAP5Q13017 1502 aa24.84■■□□□ 1.57
BBS4-204ENST00000562084 PPM1GO15355 546 aaPredicted RBP24.84■■□□□ 1.57
BBS4-204ENST00000562084 PDE3BQ13370 1112 aa24.83■■□□□ 1.57
BBS4-204ENST00000562084 RALBP1Q15311 655 aa24.83■■□□□ 1.57
BBS4-204ENST00000562084 ARHGEF12Q9NZN5 1544 aa24.83■■□□□ 1.57
BBS4-204ENST00000562084 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.56
BBS4-204ENST00000562084 FANCAO15360 1455 aa24.82■■□□□ 1.56
BBS4-204ENST00000562084 ADGRL2O95490 1459 aa24.82■■□□□ 1.56
BBS4-204ENST00000562084 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
BBS4-204ENST00000562084 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
BBS4-204ENST00000562084 ZNF777Q9ULD5 760 aaPredicted RBP24.79■■□□□ 1.56
BBS4-204ENST00000562084 INSRP06213 1382 aa24.78■■□□□ 1.56
BBS4-204ENST00000562084 E9PCH4 1651 aa24.77■■□□□ 1.56
BBS4-204ENST00000562084 CFAP74Q9C0B2 1584 aa24.77■■□□□ 1.56
BBS4-204ENST00000562084 NEO1Q92859 1461 aa24.77■■□□□ 1.56
BBS4-204ENST00000562084 PDE4AP27815 886 aa24.77■■□□□ 1.56
BBS4-204ENST00000562084 BACH2Q9BYV9 841 aa24.77■■□□□ 1.56
BBS4-204ENST00000562084 ZMYM4Q5VZL5 1548 aa24.76■■□□□ 1.56
BBS4-204ENST00000562084 PRKCSHP14314 528 aaPredicted RBP24.76■■□□□ 1.55
BBS4-204ENST00000562084 ZNF644Q9H582 1327 aaPredicted RBP24.75■■□□□ 1.55
BBS4-204ENST00000562084 SAMD9LQ8IVG5 1584 aa24.75■■□□□ 1.55
BBS4-204ENST00000562084 WASHC2CQ9Y4E1 1318 aa24.75■■□□□ 1.55
BBS4-204ENST00000562084 DDRGK1Q96HY6 314 aa24.75■■□□□ 1.55
BBS4-204ENST00000562084 RCAN3Q9UKA8 241 aa24.74■■□□□ 1.55
BBS4-204ENST00000562084 CROCC2H7BZ55 1655 aa24.74■■□□□ 1.55
BBS4-204ENST00000562084 CAMSAP2Q08AD1 1489 aa24.71■■□□□ 1.55
BBS4-204ENST00000562084 NEFMP07197 916 aa24.7■■□□□ 1.55
BBS4-204ENST00000562084 EXOC6Q8TAG9 804 aa24.7■■□□□ 1.54
BBS4-204ENST00000562084 ADGRL1O94910 1474 aa24.69■■□□□ 1.54
BBS4-204ENST00000562084 ABCC1P33527 1531 aa24.68■■□□□ 1.54
BBS4-204ENST00000562084 SCAPERQ9BY12 1400 aa24.67■■□□□ 1.54
BBS4-204ENST00000562084 POLR3GLQ9BT43 218 aa24.67■■□□□ 1.54
BBS4-204ENST00000562084 COL17A1Q9UMD9 1497 aaPredicted RBP24.66■■□□□ 1.54
BBS4-204ENST00000562084 HNRNPMP52272 730 aaKnown RBP eCLIP24.66■■□□□ 1.54
BBS4-204ENST00000562084 ANKRD30AQ9BXX3 1397 aa24.65■■□□□ 1.54
BBS4-204ENST00000562084 SYCP2Q9BX26 1530 aa24.65■■□□□ 1.54
BBS4-204ENST00000562084 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
BBS4-204ENST00000562084 NLRP13Q86W25 1043 aa24.65■■□□□ 1.54
BBS4-204ENST00000562084 PLEKHH2Q8IVE3 1493 aa24.65■■□□□ 1.54
BBS4-204ENST00000562084 NPM2Q86SE8 214 aaKnown RBP24.64■■□□□ 1.54
BBS4-204ENST00000562084 CARD11Q9BXL7 1154 aa24.64■■□□□ 1.53
BBS4-204ENST00000562084 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
BBS4-204ENST00000562084 PKD2Q13563 968 aa24.62■■□□□ 1.53
BBS4-204ENST00000562084 RAPGEF3O95398 923 aa24.61■■□□□ 1.53
BBS4-204ENST00000562084 TRAPPC8Q9Y2L5 1435 aa24.6■■□□□ 1.53
BBS4-204ENST00000562084 SHANK2Q9UPX8 1470 aa24.6■■□□□ 1.53
BBS4-204ENST00000562084 RICTORQ6R327 1708 aa24.6■■□□□ 1.53
BBS4-204ENST00000562084 ZNF326Q5BKZ1 582 aaKnown RBP24.59■■□□□ 1.53
BBS4-204ENST00000562084 AFAP1Q8N556 730 aa24.58■■□□□ 1.53
BBS4-204ENST00000562084 IL27Q8NEV9 243 aa24.58■■□□□ 1.53
BBS4-204ENST00000562084 ANO8Q9HCE9 1232 aaPredicted RBP24.58■■□□□ 1.52
BBS4-204ENST00000562084 POGZQ7Z3K3 1410 aa24.57■■□□□ 1.52
BBS4-204ENST00000562084 ANKRD50Q9ULJ7 1429 aa24.57■■□□□ 1.52
BBS4-204ENST00000562084 FRMPD1Q5SYB0 1578 aa24.57■■□□□ 1.52
BBS4-204ENST00000562084 LAS1LQ9Y4W2 734 aaKnown RBP24.57■■□□□ 1.52
BBS4-204ENST00000562084 ARHGEF5Q12774 1597 aa24.56■■□□□ 1.52
BBS4-204ENST00000562084 BLMP54132 1417 aaPredicted RBP24.56■■□□□ 1.52
BBS4-204ENST00000562084 CNGB1Q14028 1251 aaPredicted RBP24.55■■□□□ 1.52
BBS4-204ENST00000562084 ZNF518AQ6AHZ1 1483 aa24.54■■□□□ 1.52
BBS4-204ENST00000562084 CCDC141Q6ZP82 1450 aa24.52■■□□□ 1.52
BBS4-204ENST00000562084 ST20-MTHFSA0A0A6YYL1 179 aa24.52■■□□□ 1.52
BBS4-204ENST00000562084 RSPH4AQ5TD94 716 aa24.52■■□□□ 1.52
BBS4-204ENST00000562084 SALL2Q9Y467 1007 aaPredicted RBP24.51■■□□□ 1.51
BBS4-204ENST00000562084 GSE1Q14687 1217 aa24.5■■□□□ 1.51
BBS4-204ENST00000562084 LAMC1P11047 1609 aa24.5■■□□□ 1.51
BBS4-204ENST00000562084 NUP155O75694 1391 aa24.47■■□□□ 1.51
BBS4-204ENST00000562084 TSPY4P0CV99 314 aa24.46■■□□□ 1.51
BBS4-204ENST00000562084 TSPY10P0CW01 314 aa24.46■■□□□ 1.51
BBS4-204ENST00000562084 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
BBS4-204ENST00000562084 TRPM1Q7Z4N2 1603 aa24.46■■□□□ 1.51
BBS4-204ENST00000562084 HECW2Q9P2P5 1572 aa24.44■■□□□ 1.5
BBS4-204ENST00000562084 KIDINS220Q9ULH0 1771 aa24.44■■□□□ 1.5
BBS4-204ENST00000562084 MLH3Q9UHC1 1453 aa24.43■■□□□ 1.5
BBS4-204ENST00000562084 CENPQQ7L2Z9 268 aaPredicted RBP24.43■■□□□ 1.5
BBS4-204ENST00000562084 DAXXQ9UER7 740 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms