RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 PPP1R3GB7ZBB8 358 aa14.17□□□□□ -0.14
LINC01243-201ENST00000562065 MRPL50Q8N5N7 158 aaKnown RBP14.17□□□□□ -0.14
LINC01243-201ENST00000562065 PTPN5P54829 565 aa14.15□□□□□ -0.14
LINC01243-201ENST00000562065 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
LINC01243-201ENST00000562065 EPAS1Q99814 870 aa14.15□□□□□ -0.14
LINC01243-201ENST00000562065 COL9A1P20849 921 aa14.14□□□□□ -0.15
LINC01243-201ENST00000562065 E2F4Q16254 413 aa14.14□□□□□ -0.15
LINC01243-201ENST00000562065 PROX2Q3B8N5 592 aa14.14□□□□□ -0.15
LINC01243-201ENST00000562065 NBPF3Q9H094 633 aa14.14□□□□□ -0.15
LINC01243-201ENST00000562065 PLA2G2EQ9NZK7 142 aa14.13□□□□□ -0.15
LINC01243-201ENST00000562065 BHMG1C9JSJ3 638 aaPredicted RBP14.12□□□□□ -0.15
LINC01243-201ENST00000562065 NBR1Q14596 966 aa14.1□□□□□ -0.15
LINC01243-201ENST00000562065 PDIA6Q15084 440 aa14.1□□□□□ -0.15
LINC01243-201ENST00000562065 C6orf132Q5T0Z8 1188 aa14.09□□□□□ -0.15
LINC01243-201ENST00000562065 WNT2BQ93097 391 aa14.09□□□□□ -0.15
LINC01243-201ENST00000562065 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
LINC01243-201ENST00000562065 RABGEF1Q9UJ41 708 aa14.06□□□□□ -0.16
LINC01243-201ENST00000562065 MAP3K7O43318 606 aa14.05□□□□□ -0.16
LINC01243-201ENST00000562065 THSD4Q6ZMP0 1018 aa14.05□□□□□ -0.16
LINC01243-201ENST00000562065 GRXCR2A6NFK2 248 aa14.02□□□□□ -0.17
LINC01243-201ENST00000562065 KIAA1468Q9P260 1216 aa14.02□□□□□ -0.17
LINC01243-201ENST00000562065 EN1Q05925 392 aaPredicted RBP14.01□□□□□ -0.17
LINC01243-201ENST00000562065 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
LINC01243-201ENST00000562065 ANKK1Q8NFD2 765 aa14□□□□□ -0.17
LINC01243-201ENST00000562065 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
LINC01243-201ENST00000562065 SEPT9Q9UHD8 586 aaPredicted RBP13.99□□□□□ -0.17
LINC01243-201ENST00000562065 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.17
LINC01243-201ENST00000562065 ARIH1Q9Y4X5 557 aaPredicted RBP13.95□□□□□ -0.18
LINC01243-201ENST00000562065 LAPTM4BQ86VI4 370 aa13.94□□□□□ -0.18
LINC01243-201ENST00000562065 BCAMP50895 628 aa13.93□□□□□ -0.18
LINC01243-201ENST00000562065 ONECUT3O60422 494 aaPredicted RBP13.92□□□□□ -0.18
LINC01243-201ENST00000562065 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
LINC01243-201ENST00000562065 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
LINC01243-201ENST00000562065 PACS2Q86VP3 889 aa13.89□□□□□ -0.19
LINC01243-201ENST00000562065 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
LINC01243-201ENST00000562065 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
LINC01243-201ENST00000562065 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
LINC01243-201ENST00000562065 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
LINC01243-201ENST00000562065 CDHR5Q9HBB8 845 aa13.85□□□□□ -0.19
LINC01243-201ENST00000562065 OSBPP22059 807 aa13.84□□□□□ -0.19
LINC01243-201ENST00000562065 SMAPO00193 183 aa13.83□□□□□ -0.2
LINC01243-201ENST00000562065 PRSS12P56730 875 aa13.83□□□□□ -0.2
LINC01243-201ENST00000562065 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
LINC01243-201ENST00000562065 LRCH3Q96II8 777 aa13.82□□□□□ -0.2
LINC01243-201ENST00000562065 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
LINC01243-201ENST00000562065 KCNV2Q8TDN2 545 aa13.81□□□□□ -0.2
LINC01243-201ENST00000562065 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
LINC01243-201ENST00000562065 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
LINC01243-201ENST00000562065 ARHGEF1Q92888 912 aaKnown RBP13.78□□□□□ -0.2
LINC01243-201ENST00000562065 FAM198AQ9UFP1 575 aa13.78□□□□□ -0.2
LINC01243-201ENST00000562065 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
LINC01243-201ENST00000562065 NBPF26B4DH59 902 aa13.77□□□□□ -0.21
LINC01243-201ENST00000562065 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
LINC01243-201ENST00000562065 MLLT3P42568 568 aaPredicted RBP13.74□□□□□ -0.21
LINC01243-201ENST00000562065 NYAP1Q6ZVC0 841 aa13.74□□□□□ -0.21
LINC01243-201ENST00000562065 TATDN2Q93075 761 aa13.74□□□□□ -0.21
LINC01243-201ENST00000562065 C3orf80F5H4A9 247 aa13.73□□□□□ -0.21
LINC01243-201ENST00000562065 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
LINC01243-201ENST00000562065 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
LINC01243-201ENST00000562065 NUDT18Q6ZVK8 323 aa13.71□□□□□ -0.21
LINC01243-201ENST00000562065 A0A0G2JS52 829 aa13.7□□□□□ -0.22
LINC01243-201ENST00000562065 RNF40O75150 1001 aa13.7□□□□□ -0.22
LINC01243-201ENST00000562065 PPP4CP60510 307 aa13.7□□□□□ -0.22
LINC01243-201ENST00000562065 PADI6Q6TGC4 694 aa13.7□□□□□ -0.22
LINC01243-201ENST00000562065 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
LINC01243-201ENST00000562065 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
LINC01243-201ENST00000562065 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
LINC01243-201ENST00000562065 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
LINC01243-201ENST00000562065 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
LINC01243-201ENST00000562065 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
LINC01243-201ENST00000562065 KCNC4Q03721 635 aa13.64□□□□□ -0.23
LINC01243-201ENST00000562065 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
LINC01243-201ENST00000562065 TTC13Q8NBP0 860 aa13.6□□□□□ -0.23
LINC01243-201ENST00000562065 SEMA3EO15041 775 aa13.59□□□□□ -0.23
LINC01243-201ENST00000562065 RGS20O76081 388 aa13.57□□□□□ -0.24
LINC01243-201ENST00000562065 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
LINC01243-201ENST00000562065 SWT1Q5T5J6 900 aaKnown RBP13.57□□□□□ -0.24
LINC01243-201ENST00000562065 PTGDRQ13258 359 aa13.55□□□□□ -0.24
LINC01243-201ENST00000562065 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
LINC01243-201ENST00000562065 SLF2Q8IX21 1173 aa13.52□□□□□ -0.25
LINC01243-201ENST00000562065 MTRQ99707 1265 aa13.51□□□□□ -0.25
LINC01243-201ENST00000562065 EYA1Q99502 592 aa13.5□□□□□ -0.25
LINC01243-201ENST00000562065 APLP1P51693 650 aa13.49□□□□□ -0.25
LINC01243-201ENST00000562065 TJAP1Q5JTD0 557 aa13.49□□□□□ -0.25
LINC01243-201ENST00000562065 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
LINC01243-201ENST00000562065 FCHSD2O94868 740 aa13.48□□□□□ -0.25
LINC01243-201ENST00000562065 FAM161AQ3B820 660 aa13.48□□□□□ -0.25
LINC01243-201ENST00000562065 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
LINC01243-201ENST00000562065 IRX2Q9BZI1 471 aaPredicted RBP13.48□□□□□ -0.25
LINC01243-201ENST00000562065 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
LINC01243-201ENST00000562065 DNAJB2P25686 324 aa13.45□□□□□ -0.26
LINC01243-201ENST00000562065 ADGRG1Q9Y653 693 aa13.45□□□□□ -0.26
LINC01243-201ENST00000562065 COPS2P61201 443 aa13.44□□□□□ -0.26
LINC01243-201ENST00000562065 ZNF516Q92618 1163 aa13.43□□□□□ -0.26
LINC01243-201ENST00000562065 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
LINC01243-201ENST00000562065 RBM26Q5T8P6 1007 aaKnown RBP13.42□□□□□ -0.26
LINC01243-201ENST00000562065 SMYD5Q6GMV2 418 aa13.42□□□□□ -0.26
LINC01243-201ENST00000562065 RCCD1A6NED2 376 aa13.4□□□□□ -0.26
LINC01243-201ENST00000562065 TMEM134Q9H6X4 195 aa13.39□□□□□ -0.27
LINC01243-201ENST00000562065 PRR14Q9BWN1 585 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms