RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
VPS9D1-202ENST00000561976 C9orf84Q5VXU9 1444 aa18.6■□□□□ 0.57
VPS9D1-202ENST00000561976 PLEKHD1A6NEE1 506 aa18.59■□□□□ 0.57
VPS9D1-202ENST00000561976 NLRP13Q86W25 1043 aa18.59■□□□□ 0.57
VPS9D1-202ENST00000561976 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
VPS9D1-202ENST00000561976 FBLN2P98095 1184 aa18.58■□□□□ 0.56
VPS9D1-202ENST00000561976 ADCY10Q96PN6 1610 aa18.57■□□□□ 0.56
VPS9D1-202ENST00000561976 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
VPS9D1-202ENST00000561976 PDE4AP27815 886 aa18.56■□□□□ 0.56
VPS9D1-202ENST00000561976 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
VPS9D1-202ENST00000561976 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.56
VPS9D1-202ENST00000561976 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
VPS9D1-202ENST00000561976 SHANK2Q9UPX8 1470 aa18.53■□□□□ 0.56
VPS9D1-202ENST00000561976 RGL3Q3MIN7 710 aa18.52■□□□□ 0.56
VPS9D1-202ENST00000561976 PARD3Q8TEW0 1356 aa18.52■□□□□ 0.55
VPS9D1-202ENST00000561976 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
VPS9D1-202ENST00000561976 JPH4Q96JJ6 628 aa18.51■□□□□ 0.55
VPS9D1-202ENST00000561976 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
VPS9D1-202ENST00000561976 E9PCH4 1651 aa18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 BACH2Q9BYV9 841 aa18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 CDC42BPAQ5VT25 1732 aa18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 PLIN1O60240 522 aa18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 MS4A1P11836 297 aa18.5■□□□□ 0.55
VPS9D1-202ENST00000561976 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
VPS9D1-202ENST00000561976 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
VPS9D1-202ENST00000561976 PER1O15534 1290 aaPredicted RBP18.47■□□□□ 0.55
VPS9D1-202ENST00000561976 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
VPS9D1-202ENST00000561976 NEFMP07197 916 aa18.47■□□□□ 0.55
VPS9D1-202ENST00000561976 ABCC10Q5T3U5 1492 aa18.46■□□□□ 0.55
VPS9D1-202ENST00000561976 PTPRGP23470 1445 aa18.46■□□□□ 0.55
VPS9D1-202ENST00000561976 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
VPS9D1-202ENST00000561976 PRAG1Q86YV5 1406 aa18.45■□□□□ 0.54
VPS9D1-202ENST00000561976 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
VPS9D1-202ENST00000561976 ATP10BO94823 1461 aa18.44■□□□□ 0.54
VPS9D1-202ENST00000561976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.549e-8■■■■□ 19.5
VPS9D1-202ENST00000561976 PANK3Q9H999 370 aa18.43■□□□□ 0.54
VPS9D1-202ENST00000561976 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
VPS9D1-202ENST00000561976 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
VPS9D1-202ENST00000561976 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
VPS9D1-202ENST00000561976 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
VPS9D1-202ENST00000561976 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
VPS9D1-202ENST00000561976 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
VPS9D1-202ENST00000561976 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
VPS9D1-202ENST00000561976 USP35Q9P2H5 1018 aa18.4■□□□□ 0.54
VPS9D1-202ENST00000561976 COL17A1Q9UMD9 1497 aaPredicted RBP18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 TMF1P82094 1093 aa18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 ABCA8O94911 1581 aa18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 BLMP54132 1417 aaPredicted RBP18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 TESK2Q96S53 571 aa18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 ARHGEF5Q12774 1597 aa18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
VPS9D1-202ENST00000561976 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
VPS9D1-202ENST00000561976 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
VPS9D1-202ENST00000561976 ERBINQ96RT1 1412 aa18.36■□□□□ 0.53
VPS9D1-202ENST00000561976 A2MP01023 1474 aa18.35■□□□□ 0.53
VPS9D1-202ENST00000561976 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
VPS9D1-202ENST00000561976 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
VPS9D1-202ENST00000561976 NUP160Q12769 1436 aa18.34■□□□□ 0.53
VPS9D1-202ENST00000561976 ADAMTS8Q9UP79 889 aa18.34■□□□□ 0.53
VPS9D1-202ENST00000561976 INSRP06213 1382 aa18.34■□□□□ 0.53
VPS9D1-202ENST00000561976 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.52
VPS9D1-202ENST00000561976 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
VPS9D1-202ENST00000561976 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
VPS9D1-202ENST00000561976 PLA2R1Q13018 1463 aa18.32■□□□□ 0.52
VPS9D1-202ENST00000561976 ZMYM4Q5VZL5 1548 aa18.32■□□□□ 0.52
VPS9D1-202ENST00000561976 DAXXQ9UER7 740 aaPredicted RBP18.31■□□□□ 0.52
VPS9D1-202ENST00000561976 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
VPS9D1-202ENST00000561976 SAMD9LQ8IVG5 1584 aa18.31■□□□□ 0.52
VPS9D1-202ENST00000561976 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
VPS9D1-202ENST00000561976 CENPQQ7L2Z9 268 aaPredicted RBP18.28■□□□□ 0.52
VPS9D1-202ENST00000561976 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-202ENST00000561976 SLC4A3P48751 1232 aa18.27■□□□□ 0.52
VPS9D1-202ENST00000561976 LAMC1P11047 1609 aa18.27■□□□□ 0.52
VPS9D1-202ENST00000561976 KDM2BQ8NHM5 1336 aa18.26■□□□□ 0.51
VPS9D1-202ENST00000561976 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
VPS9D1-202ENST00000561976 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
VPS9D1-202ENST00000561976 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-202ENST00000561976 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
VPS9D1-202ENST00000561976 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
VPS9D1-202ENST00000561976 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
VPS9D1-202ENST00000561976 GOLGA2Q08379 1002 aa18.25■□□□□ 0.51
VPS9D1-202ENST00000561976 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
VPS9D1-202ENST00000561976 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
VPS9D1-202ENST00000561976 UNC13BO14795 1591 aa18.24■□□□□ 0.51
VPS9D1-202ENST00000561976 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
VPS9D1-202ENST00000561976 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
VPS9D1-202ENST00000561976 FAM161AQ3B820 660 aa18.23■□□□□ 0.51
VPS9D1-202ENST00000561976 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
VPS9D1-202ENST00000561976 RGS3P49796 1198 aa18.21■□□□□ 0.51
VPS9D1-202ENST00000561976 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
VPS9D1-202ENST00000561976 GSE1Q14687 1217 aa18.19■□□□□ 0.5
VPS9D1-202ENST00000561976 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
VPS9D1-202ENST00000561976 AMER1Q5JTC6 1135 aaPredicted RBP18.19■□□□□ 0.5
VPS9D1-202ENST00000561976 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
VPS9D1-202ENST00000561976 C8orf34Q49A92 452 aa18.18■□□□□ 0.5
VPS9D1-202ENST00000561976 CDCA8Q53HL2 280 aa18.18■□□□□ 0.5
VPS9D1-202ENST00000561976 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms