RNA–Protein interactions for RNA: ENST00000561930.1

PDXDC1-206, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-206ENST00000561930 E2F4Q16254 413 aa12.41□□□□□ -0.42
PDXDC1-206ENST00000561930 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
PDXDC1-206ENST00000561930 DDX12PQ92771 950 aa12.4□□□□□ -0.42
PDXDC1-206ENST00000561930 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
PDXDC1-206ENST00000561930 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-206ENST00000561930 PTPN5P54829 565 aa12.37□□□□□ -0.43
PDXDC1-206ENST00000561930 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-206ENST00000561930 PLA2G2EQ9NZK7 142 aa12.35□□□□□ -0.43
PDXDC1-206ENST00000561930 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
PDXDC1-206ENST00000561930 WNT2BQ93097 391 aa12.34□□□□□ -0.43
PDXDC1-206ENST00000561930 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
PDXDC1-206ENST00000561930 COL9A1P20849 921 aa12.33□□□□□ -0.44
PDXDC1-206ENST00000561930 NBR1Q14596 966 aa12.33□□□□□ -0.44
PDXDC1-206ENST00000561930 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
PDXDC1-206ENST00000561930 MAP3K7O43318 606 aa12.31□□□□□ -0.44
PDXDC1-206ENST00000561930 PDIA6Q15084 440 aa12.31□□□□□ -0.44
PDXDC1-206ENST00000561930 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
PDXDC1-206ENST00000561930 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
PDXDC1-206ENST00000561930 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
PDXDC1-206ENST00000561930 THSD4Q6ZMP0 1018 aa12.27□□□□□ -0.45
PDXDC1-206ENST00000561930 ANKK1Q8NFD2 765 aa12.26□□□□□ -0.45
PDXDC1-206ENST00000561930 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
PDXDC1-206ENST00000561930 TSHZ2Q9NRE2 1034 aa12.24□□□□□ -0.45
PDXDC1-206ENST00000561930 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
PDXDC1-206ENST00000561930 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
PDXDC1-206ENST00000561930 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
PDXDC1-206ENST00000561930 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-206ENST00000561930 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-206ENST00000561930 PACS2Q86VP3 889 aa12.21□□□□□ -0.45
PDXDC1-206ENST00000561930 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-206ENST00000561930 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-206ENST00000561930 CERKQ8TCT0 537 aa12.16□□□□□ -0.46
PDXDC1-206ENST00000561930 BCAMP50895 628 aa12.15□□□□□ -0.46
PDXDC1-206ENST00000561930 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
PDXDC1-206ENST00000561930 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
PDXDC1-206ENST00000561930 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
PDXDC1-206ENST00000561930 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
PDXDC1-206ENST00000561930 PRSS12P56730 875 aa12.11□□□□□ -0.47
PDXDC1-206ENST00000561930 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-206ENST00000561930 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-206ENST00000561930 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
PDXDC1-206ENST00000561930 OSBPP22059 807 aa12.1□□□□□ -0.47
PDXDC1-206ENST00000561930 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
PDXDC1-206ENST00000561930 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
PDXDC1-206ENST00000561930 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
PDXDC1-206ENST00000561930 PNMA3Q9UL41 463 aa12.07□□□□□ -0.48
PDXDC1-206ENST00000561930 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
PDXDC1-206ENST00000561930 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
PDXDC1-206ENST00000561930 TSR3Q9UJK0 312 aaKnown RBP12.06□□□□□ -0.48
PDXDC1-206ENST00000561930 SMAPO00193 183 aa12.05□□□□□ -0.48
PDXDC1-206ENST00000561930 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
PDXDC1-206ENST00000561930 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
PDXDC1-206ENST00000561930 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
PDXDC1-206ENST00000561930 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
PDXDC1-206ENST00000561930 PPP4CP60510 307 aa12.04□□□□□ -0.48
PDXDC1-206ENST00000561930 TATDN2Q93075 761 aa12.04□□□□□ -0.48
PDXDC1-206ENST00000561930 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
PDXDC1-206ENST00000561930 NUDT18Q6ZVK8 323 aa12.01□□□□□ -0.49
PDXDC1-206ENST00000561930 RNF40O75150 1001 aa12□□□□□ -0.49
PDXDC1-206ENST00000561930 IFFO2Q5TF58 517 aa12□□□□□ -0.49
PDXDC1-206ENST00000561930 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-206ENST00000561930 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
PDXDC1-206ENST00000561930 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-206ENST00000561930 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
PDXDC1-206ENST00000561930 KCNC4Q03721 635 aa11.97□□□□□ -0.49
PDXDC1-206ENST00000561930 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
PDXDC1-206ENST00000561930 PADI6Q6TGC4 694 aa11.96□□□□□ -0.49
PDXDC1-206ENST00000561930 A0A0G2JS52 829 aa11.95□□□□□ -0.5
PDXDC1-206ENST00000561930 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
PDXDC1-206ENST00000561930 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-206ENST00000561930 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-206ENST00000561930 RGS20O76081 388 aa11.92□□□□□ -0.5
PDXDC1-206ENST00000561930 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
PDXDC1-206ENST00000561930 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
PDXDC1-206ENST00000561930 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
PDXDC1-206ENST00000561930 SEMA3EO15041 775 aa11.88□□□□□ -0.51
PDXDC1-206ENST00000561930 SLF2Q8IX21 1173 aa11.88□□□□□ -0.51
PDXDC1-206ENST00000561930 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
PDXDC1-206ENST00000561930 PTGDRQ13258 359 aa11.86□□□□□ -0.51
PDXDC1-206ENST00000561930 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-206ENST00000561930 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
PDXDC1-206ENST00000561930 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
PDXDC1-206ENST00000561930 FCHSD2O94868 740 aa11.83□□□□□ -0.52
PDXDC1-206ENST00000561930 EYA1Q99502 592 aa11.81□□□□□ -0.52
PDXDC1-206ENST00000561930 IL21Q9HBE4 155 aa11.81□□□□□ -0.52
PDXDC1-206ENST00000561930 MTRQ99707 1265 aa11.8□□□□□ -0.52
PDXDC1-206ENST00000561930 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
PDXDC1-206ENST00000561930 DNAJB2P25686 324 aa11.79□□□□□ -0.52
PDXDC1-206ENST00000561930 APLP1P51693 650 aa11.78□□□□□ -0.52
PDXDC1-206ENST00000561930 TJAP1Q5JTD0 557 aa11.77□□□□□ -0.53
PDXDC1-206ENST00000561930 PRR14Q9BWN1 585 aa11.77□□□□□ -0.53
PDXDC1-206ENST00000561930 FAM161AQ3B820 660 aa11.75□□□□□ -0.53
PDXDC1-206ENST00000561930 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
PDXDC1-206ENST00000561930 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-206ENST00000561930 COPS2P61201 443 aa11.74□□□□□ -0.53
PDXDC1-206ENST00000561930 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-206ENST00000561930 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
PDXDC1-206ENST00000561930 HIC1Q14526 733 aa11.73□□□□□ -0.53
PDXDC1-206ENST00000561930 OATP04181 439 aa11.72□□□□□ -0.53
PDXDC1-206ENST00000561930 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms